BLASTX nr result

ID: Coptis25_contig00014480 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00014480
         (1160 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK37567.1| unknown [Medicago truncatula]                          102   1e-19
ref|XP_002328068.1| AP2/ERF domain-containing transcription fact...   101   4e-19
gb|ABO48366.1| C-repeat binding facor 5 [Populus trichocarpa]         101   4e-19
ref|XP_003539462.1| PREDICTED: dehydration-responsive element-bi...   100   7e-19
ref|XP_003541976.1| PREDICTED: dehydration-responsive element-bi...    99   2e-18

>gb|AFK37567.1| unknown [Medicago truncatula]
          Length = 117

 Score =  102 bits (255), Expect = 1e-19
 Identities = 52/84 (61%), Positives = 65/84 (77%)
 Frame = -3

Query: 771 GATWSTVKITFLTLAVCLAAMLGLAFSSSDSTMIVHVMLLVLITGVLFFLLNSFLAETGL 592
           G TW+T+K  FL L +CLA MLGLAFSSSDS ++ HV+ LVLI+  LF LL+ FL+ETGL
Sbjct: 33  GPTWNTLKSAFLMLGLCLAVMLGLAFSSSDSWLVFHVVFLVLISVTLFLLLSWFLSETGL 92

Query: 591 VSVEQQMQDMGLVSKDGAEPSKNS 520
           VSVE QM++MGL +KD  E +K S
Sbjct: 93  VSVEHQMREMGLEAKDPLEANKKS 116


>ref|XP_002328068.1| AP2/ERF domain-containing transcription factor [Populus trichocarpa]
            gi|222837583|gb|EEE75948.1| AP2/ERF domain-containing
            transcription factor [Populus trichocarpa]
          Length = 219

 Score =  101 bits (251), Expect = 4e-19
 Identities = 45/67 (67%), Positives = 51/67 (76%)
 Frame = +1

Query: 901  LYNLHTIDYIPAVISHKRSTGRKKFKETRHPIYRGVRHRNGCKWVCEIRELNKKSRIWLG 1080
            +YNL      P  +  K+  GRKKFKETRHP+YRGVR RNG KWVCE+RE NKKSRIWLG
Sbjct: 29   IYNLKQAQERPVTVLKKKKAGRKKFKETRHPVYRGVRKRNGNKWVCEVREPNKKSRIWLG 88

Query: 1081 THTTPEM 1101
            T T+PEM
Sbjct: 89   TFTSPEM 95


>gb|ABO48366.1| C-repeat binding facor 5 [Populus trichocarpa]
          Length = 285

 Score =  101 bits (251), Expect = 4e-19
 Identities = 45/67 (67%), Positives = 51/67 (76%)
 Frame = +1

Query: 901  LYNLHTIDYIPAVISHKRSTGRKKFKETRHPIYRGVRHRNGCKWVCEIRELNKKSRIWLG 1080
            +YNL      P  +  K+  GRKKFKETRHP+YRGVR RNG KWVCE+RE NKKSRIWLG
Sbjct: 29   IYNLKQAQERPVTVLKKKKAGRKKFKETRHPVYRGVRKRNGNKWVCEVREPNKKSRIWLG 88

Query: 1081 THTTPEM 1101
            T T+PEM
Sbjct: 89   TFTSPEM 95


>ref|XP_003539462.1| PREDICTED: dehydration-responsive element-binding protein 1F-like
            [Glycine max]
          Length = 252

 Score =  100 bits (249), Expect = 7e-19
 Identities = 43/55 (78%), Positives = 49/55 (89%)
 Frame = +1

Query: 937  VISHKRSTGRKKFKETRHPIYRGVRHRNGCKWVCEIRELNKKSRIWLGTHTTPEM 1101
            +ISHKR  GRKKF+ETRHP+YRGVR RNG +WVCE+RE NKKSRIWLGT+ TPEM
Sbjct: 58   LISHKRKAGRKKFRETRHPVYRGVRQRNGNRWVCEVREPNKKSRIWLGTYPTPEM 112


>ref|XP_003541976.1| PREDICTED: dehydration-responsive element-binding protein 1F-like
            [Glycine max]
          Length = 243

 Score = 99.4 bits (246), Expect = 2e-18
 Identities = 43/66 (65%), Positives = 52/66 (78%)
 Frame = +1

Query: 904  YNLHTIDYIPAVISHKRSTGRKKFKETRHPIYRGVRHRNGCKWVCEIRELNKKSRIWLGT 1083
            ++  T   +  +I HKR  GRKKF+ETRHP+YRGVR RNG KWVCE+RE NKKSRIWLGT
Sbjct: 47   WHAETSKKVVVLIPHKRKAGRKKFRETRHPVYRGVRQRNGNKWVCEVREPNKKSRIWLGT 106

Query: 1084 HTTPEM 1101
            + +PEM
Sbjct: 107  YPSPEM 112


Top