BLASTX nr result

ID: Coptis25_contig00014476 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00014476
         (444 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEC75772.1| hypothetical protein OsI_12678 [Oryza sativa Indi...    87   1e-22
ref|NP_001173748.1| Os04g0142700 [Oryza sativa Japonica Group] g...    91   2e-22
emb|CAE04194.2| OSJNBa0011E07.3 [Oryza sativa Japonica Group] gi...    91   2e-22
ref|NP_001064280.2| Os10g0192300 [Oryza sativa Japonica Group] g...    82   2e-21
gb|AAM92800.1| putative DNA helicase homolog [Oryza sativa Japon...    82   2e-21

>gb|EEC75772.1| hypothetical protein OsI_12678 [Oryza sativa Indica Group]
          Length = 1072

 Score = 86.7 bits (213), Expect(2) = 1e-22
 Identities = 43/105 (40%), Positives = 68/105 (64%)
 Frame = -3

Query: 442  KGLDCVSLEVRRGPEFDEIQHFVDGRWNCAPEALWKICKFALSKIYPSVERLHIHLPNRQ 263
            KG DC S  V    E +EIQ + + R+   PEA++++  F L  IYP+V +L +HLPN Q
Sbjct: 798  KGHDCASFSVDPSGEINEIQQYRNARYVTPPEAIYRMLGFPLFGIYPAVLQLQLHLPNMQ 857

Query: 262  QLRYYSHQSVSNVLADELNSKTMLTEFFKLYRDDHEARQLLYREY 128
             + Y  + ++ +V+    +S+T LTE+FK+ + D EAR+LLY+E+
Sbjct: 858  YVMYDENVNLEDVVNRPSSSRTTLTEYFKMNQVDPEARKLLYKEF 902



 Score = 44.7 bits (104), Expect(2) = 1e-22
 Identities = 16/51 (31%), Positives = 31/51 (60%)
 Frame = -2

Query: 155  SKAIIIQRIPEYYRWLAKERTWVRRLSTLKVIGRIYTIHLSEGDIFFLRVL 3
            ++ ++ +  PE+YRW+  +  W +R +    +GR+   H  EG+ ++LRVL
Sbjct: 894  ARKLLYKEFPEHYRWITGQNVWQKRKTKRGQVGRVVYAHPGEGERYYLRVL 944


>ref|NP_001173748.1| Os04g0142700 [Oryza sativa Japonica Group]
           gi|255675151|dbj|BAH92476.1| Os04g0142700 [Oryza sativa
           Japonica Group]
          Length = 888

 Score = 90.5 bits (223), Expect(2) = 2e-22
 Identities = 44/105 (41%), Positives = 68/105 (64%)
 Frame = -3

Query: 442 KGLDCVSLEVRRGPEFDEIQHFVDGRWNCAPEALWKICKFALSKIYPSVERLHIHLPNRQ 263
           KG DC S  V    E +EIQ + + R+   PEA++++  F L  IYP+V +L +HLPN Q
Sbjct: 394 KGHDCASFSVDSSGEINEIQQYKNARYVTPPEAIYRMLHFPLFGIYPAVLQLQLHLPNMQ 453

Query: 262 QLRYYSHQSVSNVLADELNSKTMLTEFFKLYRDDHEARQLLYREY 128
            + Y    ++ NV+ +  +S+T LTE+FK+ + D EAR+LLY+E+
Sbjct: 454 YVTYDEDGNLENVVNNRSSSRTTLTEYFKMNQVDPEARKLLYKEF 498



 Score = 40.0 bits (92), Expect(2) = 2e-22
 Identities = 14/51 (27%), Positives = 30/51 (58%)
 Frame = -2

Query: 155 SKAIIIQRIPEYYRWLAKERTWVRRLSTLKVIGRIYTIHLSEGDIFFLRVL 3
           ++ ++ +  P++YRW+  +  W +R +    +GR+   H  EG+ ++L VL
Sbjct: 490 ARKLLYKEFPKHYRWITGQNVWQKRKTKRGQVGRVVYAHPREGERYYLGVL 540


>emb|CAE04194.2| OSJNBa0011E07.3 [Oryza sativa Japonica Group]
           gi|38346973|emb|CAE02268.2| OSJNBb0049I21.9 [Oryza
           sativa Japonica Group]
          Length = 412

 Score = 90.5 bits (223), Expect(2) = 2e-22
 Identities = 44/105 (41%), Positives = 68/105 (64%)
 Frame = -3

Query: 442 KGLDCVSLEVRRGPEFDEIQHFVDGRWNCAPEALWKICKFALSKIYPSVERLHIHLPNRQ 263
           KG DC S  V    E +EIQ + + R+   PEA++++  F L  IYP+V +L +HLPN Q
Sbjct: 136 KGHDCASFSVDSSGEINEIQQYKNARYVTPPEAIYRMLHFPLFGIYPAVLQLQLHLPNMQ 195

Query: 262 QLRYYSHQSVSNVLADELNSKTMLTEFFKLYRDDHEARQLLYREY 128
            + Y    ++ NV+ +  +S+T LTE+FK+ + D EAR+LLY+E+
Sbjct: 196 YVTYDEDGNLENVVNNRSSSRTTLTEYFKMNQVDPEARKLLYKEF 240



 Score = 40.0 bits (92), Expect(2) = 2e-22
 Identities = 14/51 (27%), Positives = 30/51 (58%)
 Frame = -2

Query: 155 SKAIIIQRIPEYYRWLAKERTWVRRLSTLKVIGRIYTIHLSEGDIFFLRVL 3
           ++ ++ +  P++YRW+  +  W +R +    +GR+   H  EG+ ++L VL
Sbjct: 232 ARKLLYKEFPKHYRWITGQNVWQKRKTKRGQVGRVVYAHPREGERYYLGVL 282


>ref|NP_001064280.2| Os10g0192300 [Oryza sativa Japonica Group]
            gi|255679265|dbj|BAF26194.2| Os10g0192300 [Oryza sativa
            Japonica Group]
          Length = 1575

 Score = 81.6 bits (200), Expect(2) = 2e-21
 Identities = 41/108 (37%), Positives = 65/108 (60%), Gaps = 3/108 (2%)
 Frame = -3

Query: 442  KGLDCVSL---EVRRGPEFDEIQHFVDGRWNCAPEALWKICKFALSKIYPSVERLHIHLP 272
            KG D  S+   E       DEIQ + D RW   PEALW+I  F LSK++P V++L +HLP
Sbjct: 829  KGHDRASVTLGEADSNGNIDEIQQYRDARWVTPPEALWRIYSFDLSKVHPPVKQLQLHLP 888

Query: 271  NRQQLRYYSHQSVSNVLADELNSKTMLTEFFKLYRDDHEARQLLYREY 128
            N   + + + Q + +V+      K+MLTE+F+  + + +AR +LY+++
Sbjct: 889  NMHMVSFRAGQDLHDVVERNGVEKSMLTEYFEANKVNEDARGILYKDF 936



 Score = 45.4 bits (106), Expect(2) = 2e-21
 Identities = 20/51 (39%), Positives = 31/51 (60%)
 Frame = -2

Query: 155  SKAIIIQRIPEYYRWLAKERTWVRRLSTLKVIGRIYTIHLSEGDIFFLRVL 3
            ++ I+ +  PE + W A  + W RR   +  IGRI T H +EG+ ++LRVL
Sbjct: 928  ARGILYKDFPEAFTWQAGPKVWQRRKRRITQIGRIVTAHPAEGERYYLRVL 978


>gb|AAM92800.1| putative DNA helicase homolog [Oryza sativa Japonica Group]
          Length = 1443

 Score = 81.6 bits (200), Expect(2) = 2e-21
 Identities = 41/108 (37%), Positives = 65/108 (60%), Gaps = 3/108 (2%)
 Frame = -3

Query: 442 KGLDCVSL---EVRRGPEFDEIQHFVDGRWNCAPEALWKICKFALSKIYPSVERLHIHLP 272
           KG D  S+   E       DEIQ + D RW   PEALW+I  F LSK++P V++L +HLP
Sbjct: 670 KGHDRASVTLGEADSNGNIDEIQQYRDARWVTPPEALWRIYSFDLSKVHPPVKQLQLHLP 729

Query: 271 NRQQLRYYSHQSVSNVLADELNSKTMLTEFFKLYRDDHEARQLLYREY 128
           N   + + + Q + +V+      K+MLTE+F+  + + +AR +LY+++
Sbjct: 730 NMHMVSFRAGQDLHDVVERNGVEKSMLTEYFEANKVNEDARGILYKDF 777



 Score = 45.4 bits (106), Expect(2) = 2e-21
 Identities = 20/51 (39%), Positives = 31/51 (60%)
 Frame = -2

Query: 155 SKAIIIQRIPEYYRWLAKERTWVRRLSTLKVIGRIYTIHLSEGDIFFLRVL 3
           ++ I+ +  PE + W A  + W RR   +  IGRI T H +EG+ ++LRVL
Sbjct: 769 ARGILYKDFPEAFTWQAGPKVWQRRKRRITQIGRIVTAHPAEGERYYLRVL 819


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