BLASTX nr result

ID: Coptis25_contig00014457 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00014457
         (991 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514107.1| hypothetical protein RCOM_1046780 [Ricinus c...   136   7e-30
ref|XP_002282173.1| PREDICTED: uncharacterized protein LOC100261...   135   2e-29
ref|XP_002279283.1| PREDICTED: putative GATA transcription facto...   119   9e-25
gb|ABK95624.1| unknown [Populus trichocarpa]                          116   9e-24
emb|CAN63090.1| hypothetical protein VITISV_032017 [Vitis vinifera]   115   2e-23

>ref|XP_002514107.1| hypothetical protein RCOM_1046780 [Ricinus communis]
           gi|223546563|gb|EEF48061.1| hypothetical protein
           RCOM_1046780 [Ricinus communis]
          Length = 312

 Score =  136 bits (343), Expect = 7e-30
 Identities = 116/313 (37%), Positives = 154/313 (49%), Gaps = 30/313 (9%)
 Frame = -3

Query: 968 NHQSSFSSFCTPYLFLSCVSPSPTSMTPTYLHPSPPSFLLEDPNQFQAQEVQQLYNREQD 789
           +HQ  F S  T        S S +   P +++P       ++   +  +E+Q L+++E D
Sbjct: 22  HHQLIFCSKTTT----EDASSSSSISYPIFINPP------QEEVGYYHKELQPLHHQEVD 71

Query: 788 QEVGMYVLREESSDE-ILSSTHSTGQSDDGSYSFKLSSCKQEHEVIKEENQ-NVLSVKWM 615
               +Y     S D  I+ + +  GQ        +LS CK+E +    E+Q +  SVKWM
Sbjct: 72  N---IYASHGRSWDHRIIKNENENGQ--------ELSVCKKEDKSTSIEDQRDNSSVKWM 120

Query: 614 SSKLRLMKKMINTERTV-----------VDKPTQTTSWALXXXXXXXXXXXXXXXXXXXC 468
           SSK+RLM+KM+ T++TV           ++   ++ S  L                   C
Sbjct: 121 SSKMRLMRKMMTTDQTVNTTQHTSSMHKLEDKEKSRSLPLQDDYSSKNLSDNSNNTIRVC 180

Query: 467 ---NTTKTPLWRSGPRGPKSLCNACGIXXXXXXXXXXXXXXXANDTLL-----------V 330
              NTTKTPLWRSGPRGPKSLCNACGI               AN T+            V
Sbjct: 181 SDCNTTKTPLWRSGPRGPKSLCNACGIRQRKARRALAAAQASANGTIFAPDTAAMKTNKV 240

Query: 329 AXXXXXXXXSKLHFKAKRCKLTA--RRSPKKLCFNDLALRI-SKNTAYHRVYPQDEKEAA 159
                    S L FK KRCK TA  R S KKLCF DL+  I SKN+A+ +++PQDEKEAA
Sbjct: 241 QNKEKRTNNSHLPFK-KRCKFTAQSRGSRKKLCFEDLSSTILSKNSAFQQLFPQDEKEAA 299

Query: 158 ILLMALSCNLAHG 120
           ILLMALS  L HG
Sbjct: 300 ILLMALSYGLVHG 312


>ref|XP_002282173.1| PREDICTED: uncharacterized protein LOC100261004 [Vitis vinifera]
           gi|297738668|emb|CBI27913.3| unnamed protein product
           [Vitis vinifera]
          Length = 309

 Score =  135 bits (339), Expect = 2e-29
 Identities = 108/292 (36%), Positives = 140/292 (47%), Gaps = 28/292 (9%)
 Frame = -3

Query: 911 SPSPTSMT-PTYLHPSPPSFLLEDPNQFQAQEVQQLYNREQDQEVGMYVLREESSDEILS 735
           S S +S+T P +  P+         +  QAQ  Q+ +++        +V R  S D    
Sbjct: 36  SSSSSSLTCPIFFSPTKEQGGCHYRDLHQAQPQQEAHDK--------FVFRGGSYD---- 83

Query: 734 STHSTGQSDDGSYSFKLSSCKQEHEVIKEENQNVLSVKWMSSKLRLMKKMINTERTVVDK 555
             H T +S+  +   KL+  K E     E +    SVKWMSSK+R+M+KM+ +++T   K
Sbjct: 84  --HPTLESESDN-GLKLTIWKTEDR--NENHSENGSVKWMSSKMRVMQKMMISDQTGAQK 138

Query: 554 PTQT-------------TSWALXXXXXXXXXXXXXXXXXXXCNTTKTPLWRSGPRGPKSL 414
           P+ T             +                       CNTTKTPLWRSGPRGPKSL
Sbjct: 139 PSNTALNFGDHKQQSLPSETDYNSINSSNINSNNTIRVCADCNTTKTPLWRSGPRGPKSL 198

Query: 413 CNACGIXXXXXXXXXXXXXXXANDTLLVAXXXXXXXXSK-----------LHFKAKRCKL 267
           CNACGI               AN T+L          +K            H+K KRCKL
Sbjct: 199 CNACGIRQRKARRAMAAAAATANGTILPTNTAPTKTKAKHKDKKSSNGHVSHYK-KRCKL 257

Query: 266 TARRS--PKKLCFNDLALRISKNTAYHRVYPQDE-KEAAILLMALSCNLAHG 120
            A  S   KKLCF D  + +SKN+A+HRV+ QDE KEAAILLMALSC L HG
Sbjct: 258 AAAPSCETKKLCFEDFTISLSKNSAFHRVFLQDEIKEAAILLMALSCGLVHG 309


>ref|XP_002279283.1| PREDICTED: putative GATA transcription factor 22 [Vitis vinifera]
           gi|296081660|emb|CBI20665.3| unnamed protein product
           [Vitis vinifera]
          Length = 306

 Score =  119 bits (299), Expect = 9e-25
 Identities = 95/281 (33%), Positives = 129/281 (45%), Gaps = 18/281 (6%)
 Frame = -3

Query: 911 SPSPTSMTPTYLHPSPPSFLLEDPNQFQAQEVQQLYNREQDQEVGMYVLREESSDEILSS 732
           S +P S   +  HP P  F      Q Q  +      ++ + +   Y+      +  + S
Sbjct: 31  STNPPSYQASSSHPCPSFF--NSSTQSQRGDHSPRDPQQHEDKDDKYISHGGCGESQVFS 88

Query: 731 THSTGQ--SDDGSYSFKLSSCKQEHEVIKEENQNVLSVKWMSSKLRLMKKMINTERT--- 567
           + S  Q  +DD   S KLS  K+E    + +  N  + KWMSSK+RLM+KM+N++ T   
Sbjct: 89  SSSLLQPMADDNKSSHKLSVFKKE----EGDEGNKSTEKWMSSKMRLMRKMMNSDCTTAK 144

Query: 566 VVDKPTQTTSWA-LXXXXXXXXXXXXXXXXXXXCNTTKTPLWRSGPRGPKSLCNACGIXX 390
           +  K      W  +                   CNTTKTPLWRSGPRGPKSLCNACGI  
Sbjct: 145 IEQKVEDHQQWDNINEFNSSNNTSNIPIRVCSDCNTTKTPLWRSGPRGPKSLCNACGIRQ 204

Query: 389 XXXXXXXXXXXXXANDTLLVA------XXXXXXXXSKLHF-----KAKRCKLTA-RRSPK 246
                        A +   V                K+H      + K CK      + K
Sbjct: 205 RKARRAMAAAAAAAANGTAVGTEISPMKMKLPNKEKKMHTSNVGQQKKLCKPPCPPPTEK 264

Query: 245 KLCFNDLALRISKNTAYHRVYPQDEKEAAILLMALSCNLAH 123
           KLCF D    I KN+ + RV+P+DE+EAAILLMALSC+L +
Sbjct: 265 KLCFEDFTSSICKNSGFRRVFPRDEEEAAILLMALSCDLVY 305


>gb|ABK95624.1| unknown [Populus trichocarpa]
          Length = 303

 Score =  116 bits (290), Expect = 9e-24
 Identities = 98/307 (31%), Positives = 124/307 (40%), Gaps = 50/307 (16%)
 Frame = -3

Query: 893 MTPTYLHPSPPSFLLED----------------------PNQF-------QAQEVQQLYN 801
           MTP YL+P+  SF   D                      P  F         +E +   +
Sbjct: 1   MTPAYLNPASSSFPFVDLREEQNLQLFLSPHQAATSLSGPTNFFNTSAHDHQRETKPGES 60

Query: 800 REQD-QEVGMYVLREESSDEILSSTHSTGQSDDGSYSFKLSSCKQEHEVIKEENQNVLSV 624
           R+ D QEV MY +    S    S        +  S    LSS K E      E     SV
Sbjct: 61  RQHDNQEVDMYNISHGGSSS--SFQPEVNDHNYNSNFHNLSSSKMEDGA---EESGESSV 115

Query: 623 KWMSSKLRLMKKMINTERTVVDKPTQTTSWALXXXXXXXXXXXXXXXXXXXC------NT 462
           KWM SK+RLM+KM N+  +  D                                    NT
Sbjct: 116 KWMPSKMRLMQKMTNSNCSETDHMPMKFMLKFHNQQYQNNEINSSSNSNSNIRVCSDCNT 175

Query: 461 TKTPLWRSGPRGPKSLCNACGIXXXXXXXXXXXXXXXANDTLLVAXXXXXXXXSKLHFKA 282
           T TPLWRSGPRGPKSLCNACGI               AN T++          +K++ K 
Sbjct: 176 TSTPLWRSGPRGPKSLCNACGIRQRKARRAMAAAAAAANGTVIAIEASSSTRSTKVNNKV 235

Query: 281 KRCKL--------------TARRSPKKLCFNDLALRISKNTAYHRVYPQDEKEAAILLMA 144
           K+ +               ++ +S KKLCF +LAL +SKN A  +V P D +EAAILLM 
Sbjct: 236 KKSRTNHVSQNKKLSKPPESSLQSQKKLCFKNLALSLSKNPALQQVLPHDVEEAAILLME 295

Query: 143 LSCNLAH 123
           LSC   H
Sbjct: 296 LSCGFIH 302


>emb|CAN63090.1| hypothetical protein VITISV_032017 [Vitis vinifera]
          Length = 211

 Score =  115 bits (288), Expect = 2e-23
 Identities = 83/213 (38%), Positives = 106/213 (49%), Gaps = 16/213 (7%)
 Frame = -3

Query: 713 SDDGSYSFKLSSCKQEHEVIKEENQNVLSVKWMSSKLRLMKKMINTERT---VVDKPTQT 543
           +DD   S KLS  K+E    + +  N  + KWMSSK+RLM+KM+N++ T   +  K    
Sbjct: 2   ADDNKSSHKLSVFKKE----EGDEGNKSTEKWMSSKMRLMRKMMNSDCTTAKIEQKVEDH 57

Query: 542 TSWA-LXXXXXXXXXXXXXXXXXXXCNTTKTPLWRSGPRGPKSLCNACGIXXXXXXXXXX 366
             W  +                   CNTTKTPLWRSGPRGPKSLCNACGI          
Sbjct: 58  QQWDNINEXNSSNNTSNIPIRVCSDCNTTKTPLWRSGPRGPKSLCNACGIRQRKARRAMA 117

Query: 365 XXXXXANDTLLVA------XXXXXXXXSKLHF-----KAKRCKLTA-RRSPKKLCFNDLA 222
                A +   V                K+H      + K CK      + KKLCF D  
Sbjct: 118 AAAAAAANGTAVGTEISPMKMKLPNKEKKMHTSNVGQQKKLCKPPCPPPTEKKLCFEDFT 177

Query: 221 LRISKNTAYHRVYPQDEKEAAILLMALSCNLAH 123
             I KN+ + RV+P+DE+EAAILLMALSC+L +
Sbjct: 178 SSICKNSGFRRVFPRDEEEAAILLMALSCDLVY 210


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