BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00014448
         (1562 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308504.1| f-box family protein [Populus trichocarpa] g...   541   e-151
ref|XP_002516174.1| ubiquitin-protein ligase, putative [Ricinus ...   523   e-146
ref|XP_002281088.1| PREDICTED: F-box only protein 13-like [Vitis...   509   e-141
ref|XP_004141357.1| PREDICTED: F-box only protein 13-like [Cucum...   508   e-141
ref|XP_003522327.1| PREDICTED: F-box only protein 13-like [Glyci...   508   e-141

>ref|XP_002308504.1| f-box family protein [Populus trichocarpa]
            gi|222854480|gb|EEE92027.1| f-box family protein [Populus
            trichocarpa]
          Length = 409

 Score =  541 bits (1395), Expect = e-151
 Identities = 262/410 (63%), Positives = 319/410 (77%)
 Frame = +2

Query: 146  MEQDQSCVSKKTRKRKLQQEGDGDFGFTLDELNEDVLERVLSWLPTSSFFRLRSVCKRWK 325
            ME + +  S+ +RKRKL+ +  G    ++DELNED+LERVLSWLPTS+FFR  SVCKRWK
Sbjct: 1    MEHNDNWASRASRKRKLEAQDKGMLSLSMDELNEDLLERVLSWLPTSAFFRAASVCKRWK 60

Query: 326  SVASSSSFRLACSQVPSRDPWFFMVNPHFNQSIVFDTAEKSWKNLNCPLLGQENPNCNSI 505
            SV+ S+SF+LACS++PSR+PWF MV+PH NQS +FD+A++SWK LN P L +++ NC+SI
Sbjct: 61   SVSDSASFKLACSEIPSREPWFLMVDPHLNQSTIFDSADRSWKKLNYPPLLKQSSNCDSI 120

Query: 506  PVAASGGLICFRNSCGDFVVTNPVTGACRELPPLDPITQSQALHAIAMXXXXXXXXYKLV 685
            PVAASGGL+CF     +F+V NPVTG+CRELPP+    ++ +L A+AM        YKLV
Sbjct: 121  PVAASGGLVCFHMGACNFIVCNPVTGSCRELPPVHAAQETHSLLAVAMNAQNNQS-YKLV 179

Query: 686  LVFGELPNLSINIFESGKGYWGEEIMLRRKSNDLLEPDDCGDDTLYFLSKAGDVVTTNMQ 865
            LV GELP LS  ++ S  G WGEEI LRRK ++  E D   D+ +YFLSKAG+VV T+MQ
Sbjct: 180  LVSGELPKLSCKVYNSSTGCWGEEIFLRRKVDESQEFDSNDDNAVYFLSKAGNVVATDMQ 239

Query: 866  RSPSKQYSSVITVKDGEEFINFLSSSGTIVACNLVQKCFLEYPRLLPVFLEYSIDVVECT 1045
            RSPSKQYSSVITVKDGEE + FLSSSGTIV+CNL  KCF EYPRLLPVF EYSIDVVEC 
Sbjct: 240  RSPSKQYSSVITVKDGEEIVYFLSSSGTIVSCNLTTKCFSEYPRLLPVFCEYSIDVVECK 299

Query: 1046 GEXXXXXXSEFLETASLRVWKFSEVEKSWLQVAAMPPSMSHEFYGKKADINCVGSGDQVM 1225
            GE      SEF E+A+LR+W+F E  +SW Q+ AMPP+MSHEFYGKK DINCVG+GDQ+ 
Sbjct: 300  GEMLVVVLSEFFESANLRIWRFDESIRSWNQIVAMPPAMSHEFYGKKVDINCVGAGDQIF 359

Query: 1226 ICVNSGEFGTYVLCDLVTNEWIELPKYCVDGKAKEFMSAFSFEPRIEACV 1375
            IC+NS EF  YV+CDL TNEWIELPK   +G+A EFMSAFSFEPRIEA V
Sbjct: 360  ICLNSAEFFRYVVCDLRTNEWIELPKCFKNGEAVEFMSAFSFEPRIEASV 409


>ref|XP_002516174.1| ubiquitin-protein ligase, putative [Ricinus communis]
            gi|223544660|gb|EEF46176.1| ubiquitin-protein ligase,
            putative [Ricinus communis]
          Length = 412

 Score =  523 bits (1347), Expect = e-146
 Identities = 260/412 (63%), Positives = 314/412 (76%), Gaps = 2/412 (0%)
 Frame = +2

Query: 146  MEQDQSCVSKKTRKRKLQQEGDGDFGFTLDELNEDVLERVLSWLPTSSFFRLRSVCKRWK 325
            ME  +   S  +RKRK Q+E        LDELN+D+LERVLSWLPTS+FFRLRSVCKRWK
Sbjct: 1    MEHYEFWASVPSRKRKSQEEDHDMVSICLDELNQDLLERVLSWLPTSTFFRLRSVCKRWK 60

Query: 326  SVASSSSFRLACSQVPSRDPWFFMVNPHFNQSIVFDTAEKSWKNLNCP-LLGQENPNCNS 502
            SVA S+SF+ ACS+VPSRDPWFFMV+P+ N+  VFD+AE+SWK LN P  L   + NC+S
Sbjct: 61   SVADSTSFKFACSEVPSRDPWFFMVDPNLNKWTVFDSAERSWKKLNHPAFLQHSSSNCDS 120

Query: 503  IPVAASGGLICFRNSCGDFVVTNPVTGACRELPPLDPITQSQALHAIAMXXXXXXXX-YK 679
            +PVAASGGL+CFR   G  +V NPVTG+CR +PP    + SQ+LHAIAM         YK
Sbjct: 121  MPVAASGGLVCFRKQSGALIVCNPVTGSCRGVPPAHLESGSQSLHAIAMTTYMKNQQSYK 180

Query: 680  LVLVFGELPNLSINIFESGKGYWGEEIMLRRKSNDLLEPDDCGDDTLYFLSKAGDVVTTN 859
            LVLV GELP LS  ++ S    W EEI+L+RK ++  E D   D+ +YFLSKAG+VV T+
Sbjct: 181  LVLVSGELPKLSCRMYNSSANCWDEEILLKRKVDESQEFDAADDNAVYFLSKAGNVVATD 240

Query: 860  MQRSPSKQYSSVITVKDGEEFINFLSSSGTIVACNLVQKCFLEYPRLLPVFLEYSIDVVE 1039
            MQRSPSKQYSSV+TVK+GEE   FLSSSGTIVACNL  KCF EYPRLLPVF EYSID+VE
Sbjct: 241  MQRSPSKQYSSVMTVKNGEETAYFLSSSGTIVACNLTGKCFFEYPRLLPVFYEYSIDIVE 300

Query: 1040 CTGEXXXXXXSEFLETASLRVWKFSEVEKSWLQVAAMPPSMSHEFYGKKADINCVGSGDQ 1219
            C GE      SEF  +ASLR+W+FSE  +SW Q+AAMPP+MSHEFYGKK DINCVG+GDQ
Sbjct: 301  CRGEMLVVLLSEFFGSASLRIWRFSEDIRSWQQIAAMPPAMSHEFYGKKVDINCVGAGDQ 360

Query: 1220 VMICVNSGEFGTYVLCDLVTNEWIELPKYCVDGKAKEFMSAFSFEPRIEACV 1375
            + IC+NS EF +Y++C+L  N+W+ELPK  ++G+A EFMSAFSFEPRIEA V
Sbjct: 361  IFICLNSAEFFSYIMCNLRNNDWVELPKCFMNGEAVEFMSAFSFEPRIEASV 412


>ref|XP_002281088.1| PREDICTED: F-box only protein 13-like [Vitis vinifera]
          Length = 472

 Score =  509 bits (1310), Expect = e-141
 Identities = 262/419 (62%), Positives = 312/419 (74%), Gaps = 8/419 (1%)
 Frame = +2

Query: 143  SMEQDQSCVSKK-TRKRKLQQEGDGDFGFTLDELNEDVLERVLSWLPTSSFFRLRSVCKR 319
            SM+ D  C +   +RKRK          F LD+LN+D+LERVLSWLPTS FFRL SVCKR
Sbjct: 65   SMQTDGGCCAPTASRKRK----------FPLDDLNQDLLERVLSWLPTSVFFRLTSVCKR 114

Query: 320  WKSVASSSSFRLACSQVPSRDPWFFMVNPHFNQSIVFDTAEKSWKNLNCPLLGQENPNCN 499
            WKS+A S++F+LACSQ+PSRDPWFFMV+PH NQ +VFD+AE++WK LN P L Q NPN N
Sbjct: 115  WKSIADSATFQLACSQIPSRDPWFFMVDPHLNQWVVFDSAERNWKTLNHPPLLQLNPNIN 174

Query: 500  SIPVAASGGLICFRNSCGDFVVTNPVTGACRELPPLDPITQSQALHAIAMXXXXXXXX-Y 676
            SIPVAA GGLICFRNS G ++V NPVTG+ R+LP LD   Q+Q+LHAIAM         Y
Sbjct: 175  SIPVAAHGGLICFRNSSGHYIVCNPVTGSTRQLPLLDKPPQNQSLHAIAMNSFSTSHHSY 234

Query: 677  KLVLVFGELPNLSINIFESGKGYWGEEIMLRRKSND-----LLEPDDCGDDTLYFLSKAG 841
            KLVLV+GEL +L+  I+ S    W EEI L RK+ +       +PDD  D+T+YFLS  G
Sbjct: 235  KLVLVYGELSSLTFRIYNSSVNLWEEEIRLSRKAENPENSFQSDPDD-DDETVYFLSITG 293

Query: 842  DVVTTNMQRSPSKQYSSVITVKDG-EEFINFLSSSGTIVACNLVQKCFLEYPRLLPVFLE 1018
            +VV TNMQRSPSKQYSSVIT KDG EE + FLSSSGT+V+CNL  K F EYP+LLP   E
Sbjct: 294  NVVATNMQRSPSKQYSSVITRKDGGEEIVYFLSSSGTVVSCNLTCKLFYEYPKLLPALSE 353

Query: 1019 YSIDVVECTGEXXXXXXSEFLETASLRVWKFSEVEKSWLQVAAMPPSMSHEFYGKKADIN 1198
            YSID+VE  GE      SEFLETASLRVWKF E  ++W Q+AAMPP+MSHEFYGKK DIN
Sbjct: 354  YSIDIVESKGELLVVVLSEFLETASLRVWKFDEDTRAWRQIAAMPPAMSHEFYGKKVDIN 413

Query: 1199 CVGSGDQVMICVNSGEFGTYVLCDLVTNEWIELPKYCVDGKAKEFMSAFSFEPRIEACV 1375
            C  +G Q++IC+NSGE   Y+LCDLV N+WIELP+   + +AKEFMSAFSFEPRIEA V
Sbjct: 414  CAAAGHQILICINSGELCRYILCDLVANQWIELPQCIKEDEAKEFMSAFSFEPRIEASV 472


>ref|XP_004141357.1| PREDICTED: F-box only protein 13-like [Cucumis sativus]
            gi|449524430|ref|XP_004169226.1| PREDICTED: F-box only
            protein 13-like [Cucumis sativus]
          Length = 414

 Score =  508 bits (1309), Expect = e-141
 Identities = 250/403 (62%), Positives = 319/403 (79%), Gaps = 4/403 (0%)
 Frame = +2

Query: 179  TRKRKLQQEGDGDF--GFTLDELNEDVLERVLSWLPTSSFFRLRSVCKRWKSVASSSSFR 352
            TRKRK + +G+ +    F+LD+LN+D+LERVLS LPTS+FFRL SVCKRWKSVA+SSSF+
Sbjct: 14   TRKRK-RNDGENNTLSNFSLDDLNQDILERVLSRLPTSAFFRLSSVCKRWKSVAASSSFK 72

Query: 353  LACSQVPSRDPWFFMVNPHFNQSIVFDTAEKSWKNLNCPLLGQENPNCNSIPVAASGGLI 532
             ACS + +RDPWFFMV+PH N+SIVFD+ EK+WK LN P L Q N + +S+PVAASGGLI
Sbjct: 73   SACSDISARDPWFFMVDPHLNRSIVFDSTEKNWKKLNYPNLLQ-NHHLDSMPVAASGGLI 131

Query: 533  CFRNSCGDFVVTNPVTGACRELPPLDPITQSQALHAIAMXXXXXXXX--YKLVLVFGELP 706
            CFRNS G+FVV+NP+TG+C ELPP+D   + Q+LHAI M          YKLVLV+G++P
Sbjct: 132  CFRNSLGNFVVSNPLTGSCSELPPVDLDQKDQSLHAIVMSEDPDGCKGSYKLVLVYGQVP 191

Query: 707  NLSINIFESGKGYWGEEIMLRRKSNDLLEPDDCGDDTLYFLSKAGDVVTTNMQRSPSKQY 886
             L   ++ S  G W E++ L RK +D ++ +   D  +YFLS+ G+VV+TNMQRSPSKQY
Sbjct: 192  KLRFKVYSSTTGCWDEDVALSRKVDDSIDFNFNDDTVVYFLSRTGNVVSTNMQRSPSKQY 251

Query: 887  SSVITVKDGEEFINFLSSSGTIVACNLVQKCFLEYPRLLPVFLEYSIDVVECTGEXXXXX 1066
            SSV+T ++GE+ + F+SSSGTI+ACNL +KCF+EYPRLLPVF EYSIDVVEC GE     
Sbjct: 252  SSVVTNRNGEDTVYFISSSGTIMACNLNKKCFVEYPRLLPVFSEYSIDVVECQGEMLVVM 311

Query: 1067 XSEFLETASLRVWKFSEVEKSWLQVAAMPPSMSHEFYGKKADINCVGSGDQVMICVNSGE 1246
             SEFLETASLRVW++ E  ++W Q+AA+PP+MSHE+YGKK DINCVG+GDQ++IC+NS +
Sbjct: 312  LSEFLETASLRVWRYDEEARTWHQIAALPPAMSHEWYGKKVDINCVGAGDQILICMNSND 371

Query: 1247 FGTYVLCDLVTNEWIELPKYCVDGKAKEFMSAFSFEPRIEACV 1375
              TY+LCDLV N+W ELPK  ++G+A EFMSAFSFEPRIEA V
Sbjct: 372  LYTYLLCDLVENQWTELPKCYMNGEAVEFMSAFSFEPRIEATV 414


>ref|XP_003522327.1| PREDICTED: F-box only protein 13-like [Glycine max]
          Length = 413

 Score =  508 bits (1309), Expect = e-141
 Identities = 249/401 (62%), Positives = 305/401 (76%), Gaps = 4/401 (0%)
 Frame = +2

Query: 185  KRKLQQEGDGDF--GFTLDELNEDVLERVLSWLPTSSFFRLRSVCKRWKSVASSSSFRLA 358
            KRK  + G+      F+LD+LNED+ ER+LSWLPTS+FFRL SVCKRWKSVA+S+SF+LA
Sbjct: 13   KRKSPENGERVLFNTFSLDDLNEDLFERILSWLPTSTFFRLNSVCKRWKSVAASASFKLA 72

Query: 359  CSQVPSRDPWFFMVNPHFNQSIVFDTAEKSWKNLNCPLLGQENPNCNSIPVAASGGLICF 538
            CS +PSRDPWF MV P+ NQS++ D+AE +WK LN P L QE  N + +PVAASGGLIC+
Sbjct: 73   CSHIPSRDPWFLMVAPNLNQSVILDSAESTWKRLNHPPLLQEESNQDCVPVAASGGLICY 132

Query: 539  RNSCGDFVVTNPVTGACRELPPLDPITQSQALHAIAMXXXXXXXX-YKLVLVFGELPNLS 715
            R S G+F+VTNPVTG+CR+LPPL   +Q+Q L+AI M         +K+VLVFGELPNL 
Sbjct: 133  RKSSGNFIVTNPVTGSCRKLPPLQFASQNQPLNAIVMSTSSKDQLSFKIVLVFGELPNLL 192

Query: 716  INIFESGKGYWGEEIMLRRKSND-LLEPDDCGDDTLYFLSKAGDVVTTNMQRSPSKQYSS 892
              ++ SG   W  E  LRRK+ D  +E D   D+ +YFLSKAG VV +NMQRSPSKQ+SS
Sbjct: 193  FKVYNSGSNCWEGETALRRKTEDNSIEYDSTDDNVVYFLSKAGFVVASNMQRSPSKQFSS 252

Query: 893  VITVKDGEEFINFLSSSGTIVACNLVQKCFLEYPRLLPVFLEYSIDVVECTGEXXXXXXS 1072
            VIT KDG+E + FLSSSG +VACNL  KCF EYPRLLPVF EYSIDVVEC GE      S
Sbjct: 253  VITNKDGQEIVYFLSSSGNVVACNLTCKCFFEYPRLLPVFSEYSIDVVECNGEMLVVLLS 312

Query: 1073 EFLETASLRVWKFSEVEKSWLQVAAMPPSMSHEFYGKKADINCVGSGDQVMICVNSGEFG 1252
            EFLE A+LRVWK+ E  + W Q+AAMP + SHE+YGKKADINCVG+G+Q+ IC+NS E  
Sbjct: 313  EFLEIATLRVWKYDEASRGWHQIAAMPAANSHEWYGKKADINCVGAGNQIFICLNSPELC 372

Query: 1253 TYVLCDLVTNEWIELPKYCVDGKAKEFMSAFSFEPRIEACV 1375
            TYV+CDL TN+W+E PK C++G+  +FMSA SFEPRIEA V
Sbjct: 373  TYVVCDLETNKWVEFPKCCINGEVIDFMSALSFEPRIEASV 413