BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00014440
         (551 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283752.1| PREDICTED: polypyrimidine tract-binding prot...   130   1e-28
ref|XP_002283748.1| PREDICTED: polypyrimidine tract-binding prot...   130   1e-28
ref|XP_002533124.1| polypyrimidine tract binding protein, putati...   119   2e-25
ref|XP_002324068.1| predicted protein [Populus trichocarpa] gi|2...   114   1e-23
gb|ABK95931.1| unknown [Populus trichocarpa]                          111   9e-23

>ref|XP_002283752.1| PREDICTED: polypyrimidine tract-binding protein homolog 1 isoform 2
           [Vitis vinifera]
          Length = 420

 Score =  130 bits (328), Expect = 1e-28
 Identities = 73/142 (51%), Positives = 83/142 (58%)
 Frame = -3

Query: 549 CKLHLSYSRHTDLSVKAHNDRSRDYTXXXXXXXXXXXXXXXXXPTVMGGWQNPQTAPAYP 370
           CKLHLSYSRHTDL+VKAH+DRSRDYT                  T +  WQNPQ AP Y 
Sbjct: 284 CKLHLSYSRHTDLNVKAHSDRSRDYTIPDSGLLAVQQAPGHPGATTV--WQNPQAAPLYT 341

Query: 369 GTGVAPHAHPPHGSWDPSMQASRPTFVSVPSTFPGQTFNSPTNVPTYSSGAVPGSSPLQQ 190
           G   A  A     SWDP+MQA R TF S  S FP Q F S +++  Y   A PGSSPL  
Sbjct: 342 GHDAAAAAAVQVPSWDPNMQAGRSTFASAASAFPSQPFAS-SSISAYP--APPGSSPLTP 398

Query: 189 HQYPSPRPGGAPLSGQPPYYGQ 124
              P+ RPGGA   G+PPY+GQ
Sbjct: 399 AVPPNVRPGGASPPGRPPYFGQ 420


>ref|XP_002283748.1| PREDICTED: polypyrimidine tract-binding protein homolog 1 isoform 1
           [Vitis vinifera] gi|296082938|emb|CBI22239.3| unnamed
           protein product [Vitis vinifera]
          Length = 449

 Score =  130 bits (328), Expect = 1e-28
 Identities = 73/142 (51%), Positives = 83/142 (58%)
 Frame = -3

Query: 549 CKLHLSYSRHTDLSVKAHNDRSRDYTXXXXXXXXXXXXXXXXXPTVMGGWQNPQTAPAYP 370
           CKLHLSYSRHTDL+VKAH+DRSRDYT                  T +  WQNPQ AP Y 
Sbjct: 313 CKLHLSYSRHTDLNVKAHSDRSRDYTIPDSGLLAVQQAPGHPGATTV--WQNPQAAPLYT 370

Query: 369 GTGVAPHAHPPHGSWDPSMQASRPTFVSVPSTFPGQTFNSPTNVPTYSSGAVPGSSPLQQ 190
           G   A  A     SWDP+MQA R TF S  S FP Q F S +++  Y   A PGSSPL  
Sbjct: 371 GHDAAAAAAVQVPSWDPNMQAGRSTFASAASAFPSQPFAS-SSISAYP--APPGSSPLTP 427

Query: 189 HQYPSPRPGGAPLSGQPPYYGQ 124
              P+ RPGGA   G+PPY+GQ
Sbjct: 428 AVPPNVRPGGASPPGRPPYFGQ 449


>ref|XP_002533124.1| polypyrimidine tract binding protein, putative [Ricinus communis]
           gi|223527087|gb|EEF29269.1| polypyrimidine tract binding
           protein, putative [Ricinus communis]
          Length = 483

 Score =  119 bits (299), Expect = 2e-25
 Identities = 75/167 (44%), Positives = 91/167 (54%), Gaps = 25/167 (14%)
 Frame = -3

Query: 549 CKLHLSYSRHTDLSVKAHNDRSRDYTXXXXXXXXXXXXXXXXXPTVMGGWQNPQTAPAYP 370
           CKLHLSYSRHTDL+VKA++D+SRDYT                    M  WQNPQ +P YP
Sbjct: 321 CKLHLSYSRHTDLNVKAYSDKSRDYTIPDASLLAAGQVPGVPTAPTM--WQNPQASPMYP 378

Query: 369 ----GTGVAPHAHPPHG---SWDPSMQASRPTFVSV-PSTFPGQTFNSPTNVPTYSSGAV 214
                +  A  A  P G   +W+PSM+A  P + SV P TFPGQ++ +P   PTY S A+
Sbjct: 379 VNSYASAAAVTAQVPAGQVPAWNPSMEAGGPAYPSVPPGTFPGQSYPAPP--PTYVSAAM 436

Query: 213 P-GSSPLQQHQYPSP----------------RPGGAPLSGQPPYYGQ 124
           P GSSPL Q    SP                RPGGA   GQPP+YG+
Sbjct: 437 PVGSSPLTQGSPMSPGVGTMPMTHPGVQSNLRPGGASPPGQPPFYGR 483


>ref|XP_002324068.1| predicted protein [Populus trichocarpa] gi|222867070|gb|EEF04201.1|
           predicted protein [Populus trichocarpa]
          Length = 476

 Score =  114 bits (285), Expect = 1e-23
 Identities = 75/169 (44%), Positives = 86/169 (50%), Gaps = 27/169 (15%)
 Frame = -3

Query: 549 CKLHLSYSRHTDLSVKAHNDRSRDYTXXXXXXXXXXXXXXXXXPTVMGGWQNPQTAPAYP 370
           CKLHLSYSRHTDL+VKA +D+SRDYT                 PT    WQNPQ    Y 
Sbjct: 317 CKLHLSYSRHTDLNVKAFSDKSRDYTIPDASFLTAQAPGLHTAPTT---WQNPQAGSMYL 373

Query: 369 G-----TGVAPHAHPPH--GSWDPSMQASRPTFVSVPSTFPGQTFNSPTNVPTYSSGAV- 214
           G     T  AP   PP    +WDPSMQA  P + SV   +PGQT+ +P   P Y+S A+ 
Sbjct: 374 GSNYATTAAAPAQVPPGQVAAWDPSMQAGGPGYSSVRGMYPGQTYPTP---PAYASSALP 430

Query: 213 PGSSPLQQHQYPSP-------------------RPGGAPLSGQPPYYGQ 124
           PGSSP   H Y SP                   RPGGA   GQ PYYG+
Sbjct: 431 PGSSP---HSYSSPISPGVASMGMTHPGVQPNMRPGGASPPGQTPYYGR 476


>gb|ABK95931.1| unknown [Populus trichocarpa]
          Length = 473

 Score =  111 bits (277), Expect = 9e-23
 Identities = 67/165 (40%), Positives = 83/165 (50%), Gaps = 24/165 (14%)
 Frame = -3

Query: 549 CKLHLSYSRHTDLSVKAHNDRSRDYTXXXXXXXXXXXXXXXXXPTVMGGWQNPQTAPAYP 370
           CKLHLSYSRHTDL+VKA++D+SRDYT                 PT+   WQNPQ    Y 
Sbjct: 313 CKLHLSYSRHTDLNVKAYSDKSRDYTIPDASLIAAQAPGLHTAPTM---WQNPQAGSMYT 369

Query: 369 G-----TGVAPHAHPPH--GSWDPSMQASRPTFVSVPSTFPGQTFNSPTNVPTYSSGAVP 211
           G     T   P   PP    +WDP+MQA    + SVP T+PGQT+ +P     Y++ A+P
Sbjct: 370 GNNYATTAAVPVQVPPGQVPAWDPTMQAGGQGYASVPGTYPGQTYPTPP-ASAYATAAIP 428

Query: 210 GSSPLQQHQYP-----------------SPRPGGAPLSGQPPYYG 127
             S  + H  P                 + RP GA   GQPPYYG
Sbjct: 429 AGSSPRSHSSPISHSVASMAMSHPGMQSNLRPSGASPPGQPPYYG 473