BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00014439
         (966 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002322252.1| predicted protein [Populus trichocarpa] gi|2...   159   2e-53
ref|XP_003546783.1| PREDICTED: U5 small nuclear ribonucleoprotei...   159   8e-53
ref|XP_003531516.1| PREDICTED: U5 small nuclear ribonucleoprotei...   159   8e-53
ref|XP_002518663.1| U520, putative [Ricinus communis] gi|2235420...   159   8e-53
ref|XP_003595992.1| U5 small nuclear ribonucleoprotein 200 kDa h...   159   4e-52

>ref|XP_002322252.1| predicted protein [Populus trichocarpa] gi|222869248|gb|EEF06379.1|
            predicted protein [Populus trichocarpa]
          Length = 2157

 Score =  159 bits (403), Expect(2) = 2e-53
 Identities = 82/131 (62%), Positives = 97/131 (74%), Gaps = 4/131 (3%)
 Frame = -2

Query: 965  LLSHGFAFHHDGMAIEDCQIVADLFANGHVQVLVSTVGLAWNTSAQAPTVIIKGTQSYNQ 786
            LL +GFA HH GM   D Q+V DLFA+GHVQVLVST  LAW  +  A TVIIKGTQ YN 
Sbjct: 781  LLPYGFAVHHAGMTRGDRQLVEDLFADGHVQVLVSTATLAWGVNLPAHTVIIKGTQIYNP 840

Query: 785  IRETWTELSPLDVLQMLGRAGMPQHDTYGVGIILTNHNQLMYYFLLVNQFLSIESQFL-- 612
             +  WTELSPLDV+QMLGRAG PQ+D+YG GII+T H++L YY  L+NQ L IESQF+  
Sbjct: 841  EKGAWTELSPLDVMQMLGRAGRPQYDSYGEGIIITGHSELQYYLSLMNQQLPIESQFISK 900

Query: 611  --PELNSEIAL 585
               +LN+EI L
Sbjct: 901  LADQLNAEIVL 911



 Score = 76.6 bits (187), Expect(2) = 2e-53
 Identities = 55/141 (39%), Positives = 72/141 (51%), Gaps = 11/141 (7%)
 Frame = -1

Query: 585  NVGEVCHWVGNTYWCTRMCRHLFELKSRNPTLIG---DILSNKL-------NLIHAAATI 436
            N  E CHW+G TY   RM R        NPTL G   D+L+  +       +LIH+AA I
Sbjct: 916  NAREACHWLGYTYLYIRMLR--------NPTLYGLAPDVLTRDITLEERRADLIHSAAAI 967

Query: 435  LNENNLVWYDQKSGNLHATEHGHSVAACIPVERYI-TYHEHLKLEIGGCKQHRLISLGEM 259
            L++NNLV YD+KSG    T+ G   +        I TY+EHLK  +G  +  RL SL E 
Sbjct: 968  LDKNNLVKYDRKSGYFQGTDLGRIASYYYITHGTISTYNEHLKPTMGDIELCRLFSLSEE 1027

Query: 258  LNYSSTEDSSQDLELDYVSDR 196
              Y  T    + +EL  + DR
Sbjct: 1028 FKY-VTVRQDEKMELAKLLDR 1047



 Score = 67.8 bits (164), Expect = 4e-09
 Identities = 35/114 (30%), Positives = 57/114 (50%)
 Frame = -2

Query: 962  LSHGFAFHHDGMAIEDCQIVADLFANGHVQVLVSTVGLAWNTSAQAPTVIIKGTQSYNQI 783
            L HG  + H+G++  D ++V+ LF  G +QV V +  + W     A  V++ GTQ Y+  
Sbjct: 1624 LHHGIGYLHEGLSSLDQEVVSQLFEAGWIQVCVMSSSMCWGVPLSAHLVVVMGTQYYDGQ 1683

Query: 782  RETWTELSPLDVLQMLGRAGMPQHDTYGVGIILTNHNQLMYYFLLVNQFLSIES 621
                T+    D+LQM+G A  P  D  G  +I  +  +  YY   + +   +ES
Sbjct: 1684 ENAHTDYPVTDLLQMMGHASRPLLDNSGKCVIFCHAPRKEYYKKFLYEAFPVES 1737


>ref|XP_003546783.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
            [Glycine max]
          Length = 2183

 Score =  159 bits (403), Expect(2) = 8e-53
 Identities = 82/131 (62%), Positives = 97/131 (74%), Gaps = 4/131 (3%)
 Frame = -2

Query: 965  LLSHGFAFHHDGMAIEDCQIVADLFANGHVQVLVSTVGLAWNTSAQAPTVIIKGTQSYNQ 786
            LL +GFA HH GM   D Q+V DLFA+GHVQVLVST  LAW  +  A TVIIKGTQ YN 
Sbjct: 813  LLPYGFAIHHAGMTRTDRQLVEDLFADGHVQVLVSTATLAWGVNLPAHTVIIKGTQIYNP 872

Query: 785  IRETWTELSPLDVLQMLGRAGMPQHDTYGVGIILTNHNQLMYYFLLVNQFLSIESQFL-- 612
             +  WTELSPLDV+QMLGRAG PQ+D+YG GII+T H++L YY  L+NQ L IESQF+  
Sbjct: 873  EKGAWTELSPLDVMQMLGRAGRPQYDSYGEGIIVTGHSELQYYLSLMNQQLPIESQFVSK 932

Query: 611  --PELNSEIAL 585
               +LN+EI L
Sbjct: 933  LADQLNAEIVL 943



 Score = 74.7 bits (182), Expect(2) = 8e-53
 Identities = 54/141 (38%), Positives = 71/141 (50%), Gaps = 11/141 (7%)
 Frame = -1

Query: 585  NVGEVCHWVGNTYWCTRMCRHLFELKSRNPTLIG---DILSNKL-------NLIHAAATI 436
            N  E C+W+G TY   RM R        NP+L G   D+L+  +       +LIH AATI
Sbjct: 948  NAREACNWIGYTYLYVRMLR--------NPSLYGIAPDVLTRDITLEERRADLIHTAATI 999

Query: 435  LNENNLVWYDQKSGNLHATEHGHSVAACIPVERYI-TYHEHLKLEIGGCKQHRLISLGEM 259
            L+ NNLV YD+KSG    T+ G   +        I TY+EHLK  +G  +  RL SL E 
Sbjct: 1000 LDRNNLVKYDRKSGYFQVTDLGRIASYYYITHGSISTYNEHLKPTMGDIELCRLFSLSEE 1059

Query: 258  LNYSSTEDSSQDLELDYVSDR 196
              Y  T    + +EL  + DR
Sbjct: 1060 FKY-VTVRQDEKMELAKLLDR 1079



 Score = 65.5 bits (158), Expect = 2e-08
 Identities = 42/128 (32%), Positives = 62/128 (48%), Gaps = 4/128 (3%)
 Frame = -2

Query: 962  LSHGFAFHHDGMAIEDCQIVADLFANGHVQVLVSTVGLAWNTSAQAPTVIIKGTQSYNQI 783
            L  G  + H+G+   D  IV  LF  G +QV V    + W  +  A  V++ GTQ Y+  
Sbjct: 1651 LREGVGYLHEGLNSLDRDIVTQLFEAGWIQVCVLNSSMCWGVTLSAHLVVVMGTQYYDGR 1710

Query: 782  RETWTELSPLDVLQMLGRAGMPQHDTYGVGIILTNHNQLMYYFLLVNQFLSIES---QFL 612
                T+    D+LQM+G A  P  D  G  +IL +  +  YY   + +   +ES    FL
Sbjct: 1711 ENAQTDYPVTDLLQMMGHASRPLVDNSGKCVILCHAPRKEYYKKFLYEAFPVESHLHHFL 1770

Query: 611  PE-LNSEI 591
             + LN+EI
Sbjct: 1771 HDNLNAEI 1778


>ref|XP_003531516.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
            [Glycine max]
          Length = 2183

 Score =  159 bits (403), Expect(2) = 8e-53
 Identities = 82/131 (62%), Positives = 97/131 (74%), Gaps = 4/131 (3%)
 Frame = -2

Query: 965  LLSHGFAFHHDGMAIEDCQIVADLFANGHVQVLVSTVGLAWNTSAQAPTVIIKGTQSYNQ 786
            LL +GFA HH GM   D Q+V DLFA+GHVQVLVST  LAW  +  A TVIIKGTQ YN 
Sbjct: 813  LLPYGFAIHHAGMTRTDRQLVEDLFADGHVQVLVSTATLAWGVNLPAHTVIIKGTQIYNP 872

Query: 785  IRETWTELSPLDVLQMLGRAGMPQHDTYGVGIILTNHNQLMYYFLLVNQFLSIESQFL-- 612
             +  WTELSPLDV+QMLGRAG PQ+D+YG GII+T H++L YY  L+NQ L IESQF+  
Sbjct: 873  EKGAWTELSPLDVMQMLGRAGRPQYDSYGEGIIVTGHSELQYYLSLMNQQLPIESQFVSK 932

Query: 611  --PELNSEIAL 585
               +LN+EI L
Sbjct: 933  LADQLNAEIVL 943



 Score = 74.7 bits (182), Expect(2) = 8e-53
 Identities = 54/141 (38%), Positives = 71/141 (50%), Gaps = 11/141 (7%)
 Frame = -1

Query: 585  NVGEVCHWVGNTYWCTRMCRHLFELKSRNPTLIG---DILSNKL-------NLIHAAATI 436
            N  E C+W+G TY   RM R        NP+L G   D+L+  +       +LIH AATI
Sbjct: 948  NAREACNWIGYTYLYVRMLR--------NPSLYGIAPDVLTRDITLEERRADLIHTAATI 999

Query: 435  LNENNLVWYDQKSGNLHATEHGHSVAACIPVERYI-TYHEHLKLEIGGCKQHRLISLGEM 259
            L+ NNLV YD+KSG    T+ G   +        I TY+EHLK  +G  +  RL SL E 
Sbjct: 1000 LDRNNLVKYDRKSGYFQVTDLGRIASYYYITHGSISTYNEHLKPTMGDIELCRLFSLSEE 1059

Query: 258  LNYSSTEDSSQDLELDYVSDR 196
              Y  T    + +EL  + DR
Sbjct: 1060 FKY-VTVRQDEKMELAKLLDR 1079



 Score = 64.7 bits (156), Expect = 3e-08
 Identities = 42/128 (32%), Positives = 62/128 (48%), Gaps = 4/128 (3%)
 Frame = -2

Query: 962  LSHGFAFHHDGMAIEDCQIVADLFANGHVQVLVSTVGLAWNTSAQAPTVIIKGTQSYNQI 783
            L  G  + H+G+   D  IV  LF  G +QV V    + W  +  A  V++ GTQ Y+  
Sbjct: 1651 LREGVGYLHEGLNSLDHDIVTQLFEAGWIQVCVLNSSMCWGVTLLAHLVVVMGTQYYDGR 1710

Query: 782  RETWTELSPLDVLQMLGRAGMPQHDTYGVGIILTNHNQLMYYFLLVNQFLSIES---QFL 612
                T+    D+LQM+G A  P  D  G  +IL +  +  YY   + +   +ES    FL
Sbjct: 1711 ENAQTDYPVTDLLQMMGHASRPLVDNSGKCVILCHAPRKEYYKKFLYEAFPVESHLHHFL 1770

Query: 611  PE-LNSEI 591
             + LN+EI
Sbjct: 1771 HDNLNAEI 1778


>ref|XP_002518663.1| U520, putative [Ricinus communis] gi|223542044|gb|EEF43588.1| U520,
           putative [Ricinus communis]
          Length = 1809

 Score =  159 bits (403), Expect(2) = 8e-53
 Identities = 82/131 (62%), Positives = 96/131 (73%), Gaps = 4/131 (3%)
 Frame = -2

Query: 965 LLSHGFAFHHDGMAIEDCQIVADLFANGHVQVLVSTVGLAWNTSAQAPTVIIKGTQSYNQ 786
           LL +GFA HH GM   D Q+V DLFA+GHVQVLVST  LAW  +  A TVIIKGTQ YN 
Sbjct: 441 LLPYGFAIHHAGMTRADRQLVEDLFADGHVQVLVSTATLAWGVNLPAHTVIIKGTQIYNP 500

Query: 785 IRETWTELSPLDVLQMLGRAGMPQHDTYGVGIILTNHNQLMYYFLLVNQFLSIESQFL-- 612
            +  WTELSPLDV+QMLGRAG PQ+D+YG GII+T H +L YY  L+NQ L IESQF+  
Sbjct: 501 EKGAWTELSPLDVMQMLGRAGRPQYDSYGEGIIITGHTELQYYLSLMNQQLPIESQFVSK 560

Query: 611 --PELNSEIAL 585
              +LN+EI L
Sbjct: 561 LADQLNAEIVL 571



 Score = 74.7 bits (182), Expect(2) = 8e-53
 Identities = 54/141 (38%), Positives = 73/141 (51%), Gaps = 11/141 (7%)
 Frame = -1

Query: 585 NVGEVCHWVGNTYWCTRMCRHLFELKSRNPTLIG---DILSNKL-------NLIHAAATI 436
           N  E C+W+G TY   RM R        NPTL G   D+L+  +       +LIH++ATI
Sbjct: 576 NAREACNWLGYTYLYIRMLR--------NPTLYGLAPDVLTRDITLEERRADLIHSSATI 627

Query: 435 LNENNLVWYDQKSGNLHATEHGHSVAACIPVERYI-TYHEHLKLEIGGCKQHRLISLGEM 259
           L++NNLV YD+KSG    T+ G   +        I TY+EHLK  +G  +  RL SL E 
Sbjct: 628 LDKNNLVKYDRKSGYFQVTDLGRIASYYYITHGTISTYNEHLKPTMGDIELCRLFSLSEE 687

Query: 258 LNYSSTEDSSQDLELDYVSDR 196
             Y  T    + +EL  + DR
Sbjct: 688 FKY-VTVRQDEKMELAKLLDR 707



 Score = 65.5 bits (158), Expect = 2e-08
 Identities = 35/114 (30%), Positives = 57/114 (50%)
 Frame = -2

Query: 962  LSHGFAFHHDGMAIEDCQIVADLFANGHVQVLVSTVGLAWNTSAQAPTVIIKGTQSYNQI 783
            L  G  + H+G++  D ++V+ LF  G +QV V +  + W     A  V++ GTQ Y+  
Sbjct: 1280 LRQGVGYLHEGLSSLDQEVVSQLFEAGWIQVCVMSSSMCWGVPLAAHLVVVMGTQYYDGR 1339

Query: 782  RETWTELSPLDVLQMLGRAGMPQHDTYGVGIILTNHNQLMYYFLLVNQFLSIES 621
                T+    D+LQM+G A  P  D  G  +IL +  +  YY   + +   +ES
Sbjct: 1340 ENAHTDYPVTDLLQMMGHASRPLLDNSGKCVILCHAPRKEYYKKFLYEAFPVES 1393


>ref|XP_003595992.1| U5 small nuclear ribonucleoprotein 200 kDa helicase [Medicago
            truncatula] gi|355485040|gb|AES66243.1| U5 small nuclear
            ribonucleoprotein 200 kDa helicase [Medicago truncatula]
          Length = 2223

 Score =  159 bits (403), Expect(2) = 4e-52
 Identities = 82/131 (62%), Positives = 96/131 (73%), Gaps = 4/131 (3%)
 Frame = -2

Query: 965  LLSHGFAFHHDGMAIEDCQIVADLFANGHVQVLVSTVGLAWNTSAQAPTVIIKGTQSYNQ 786
            LL +GFA HH GM   D Q+V DLFA+GH QVLVST  LAW  +  A TVIIKGTQ YN 
Sbjct: 821  LLPYGFAIHHAGMTRTDRQLVEDLFADGHAQVLVSTATLAWGVNLPAHTVIIKGTQIYNP 880

Query: 785  IRETWTELSPLDVLQMLGRAGMPQHDTYGVGIILTNHNQLMYYFLLVNQFLSIESQFL-- 612
             +  WTELSPLDV+QMLGRAG PQ+D+YG GIILT H++L YY  L+NQ L IESQF+  
Sbjct: 881  EKGAWTELSPLDVMQMLGRAGRPQYDSYGEGIILTGHSELQYYLSLMNQQLPIESQFISK 940

Query: 611  --PELNSEIAL 585
               +LN+EI L
Sbjct: 941  LADQLNAEIVL 951



 Score = 72.4 bits (176), Expect(2) = 4e-52
 Identities = 56/156 (35%), Positives = 70/156 (44%), Gaps = 26/156 (16%)
 Frame = -1

Query: 585  NVGEVCHWVGNTYWCTRMCRHLFELKSRNPTLIG---DILSNKLNL-------------- 457
            N  E CHW+G TY   RM R        NP+L G   D+LS  + L              
Sbjct: 956  NAKEACHWIGYTYLYVRMLR--------NPSLYGLAPDVLSRDITLEERRADLFIELLEK 1007

Query: 456  --------IHAAATILNENNLVWYDQKSGNLHATEHGHSVAACIPVERYI-TYHEHLKLE 304
                    IH AATIL+ NNLV YD+KSG    T+ G   +        I TY+EHLK  
Sbjct: 1008 GTKSLWTIIHTAATILDRNNLVKYDRKSGYFQVTDLGRIASYYYITHGTISTYNEHLKPT 1067

Query: 303  IGGCKQHRLISLGEMLNYSSTEDSSQDLELDYVSDR 196
            +G  +  RL SL E   Y  T    + +EL  + DR
Sbjct: 1068 MGDIELCRLFSLSEEFKY-VTVRQDEKMELAKLLDR 1102



 Score = 67.4 bits (163), Expect = 5e-09
 Identities = 43/128 (33%), Positives = 64/128 (50%), Gaps = 4/128 (3%)
 Frame = -2

Query: 962  LSHGFAFHHDGMAIEDCQIVADLFANGHVQVLVSTVGLAWNTSAQAPTVIIKGTQSYNQI 783
            L  G  + H+G+   D  IVA LF  G +QV V +  + W  +  A  V++ GTQ Y+  
Sbjct: 1696 LREGVGYLHEGLNSLDHDIVAQLFEAGWIQVCVLSSSMCWGVTLSAHLVVVMGTQYYDGR 1755

Query: 782  RETWTELSPLDVLQMLGRAGMPQHDTYGVGIILTNHNQLMYYFLLVNQFLSIES---QFL 612
                T+    D+LQM+G A  P  D  G  +IL +  +  YY   + +   +ES    FL
Sbjct: 1756 ENAQTDYPVTDLLQMMGHASRPLVDNSGKCVILCHAPRKEYYKKFLYEAFPVESHLHHFL 1815

Query: 611  PE-LNSEI 591
             + LN+EI
Sbjct: 1816 HDNLNAEI 1823