BLASTX nr result

ID: Coptis25_contig00014432 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00014432
         (364 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275928.1| PREDICTED: protein argonaute 4 [Vitis vinife...   196   2e-48
ref|XP_002527764.1| eukaryotic translation initiation factor 2c,...   196   2e-48
gb|AFV15381.1| AGO4A [Solanum lycopersicum]                           194   6e-48
gb|ACZ04920.1| argonaute 4-like protein [Pelargonium x hortorum]      188   3e-46
gb|ABC61505.1| AGO4-2, partial [Nicotiana benthamiana]                187   6e-46

>ref|XP_002275928.1| PREDICTED: protein argonaute 4 [Vitis vinifera]
           gi|296083994|emb|CBI24382.3| unnamed protein product
           [Vitis vinifera]
          Length = 913

 Score =  196 bits (498), Expect = 2e-48
 Identities = 100/121 (82%), Positives = 110/121 (90%)
 Frame = -1

Query: 364 DTELGGKDFAYDGEKTLFTVGPLPQNKHDFTVVLEDISSNRAAANGSPKGSGSPDEGDRK 185
           D+ELGGKDFAYDGEK+LFTVGPLP+NK +FTVVLED+SSNR   NGSP   GSP+E DRK
Sbjct: 109 DSELGGKDFAYDGEKSLFTVGPLPRNKLEFTVVLEDVSSNRNNGNGSPD-RGSPNESDRK 167

Query: 184 RFRRPFQSKTFKVAISFAAKIPMKAIALALRGQESENSQDALRVLDIILRQHAAKQGCLL 5
           R RRP+QSKTFKV ISFAAKIPM+AIA ALRGQESENSQ+ALRVLDIILRQHA+KQGCLL
Sbjct: 168 RMRRPYQSKTFKVEISFAAKIPMQAIANALRGQESENSQEALRVLDIILRQHASKQGCLL 227

Query: 4   V 2
           V
Sbjct: 228 V 228


>ref|XP_002527764.1| eukaryotic translation initiation factor 2c, putative [Ricinus
           communis] gi|223532851|gb|EEF34625.1| eukaryotic
           translation initiation factor 2c, putative [Ricinus
           communis]
          Length = 921

 Score =  196 bits (497), Expect = 2e-48
 Identities = 97/121 (80%), Positives = 109/121 (90%)
 Frame = -1

Query: 364 DTELGGKDFAYDGEKTLFTVGPLPQNKHDFTVVLEDISSNRAAANGSPKGSGSPDEGDRK 185
           D+E+GGK FAYDGEK+LFTVG LP+NK +FTVVLED++SNR   N SP G GSP+EGDRK
Sbjct: 120 DSEMGGKKFAYDGEKSLFTVGALPRNKLEFTVVLEDVTSNRNNGNASPDGHGSPNEGDRK 179

Query: 184 RFRRPFQSKTFKVAISFAAKIPMKAIALALRGQESENSQDALRVLDIILRQHAAKQGCLL 5
           R RRP+QSKTFKV ISFAAKIPM+AIA ALRGQESENSQ+A+RVLDIILRQHAAKQGCLL
Sbjct: 180 RMRRPYQSKTFKVEISFAAKIPMQAIANALRGQESENSQEAIRVLDIILRQHAAKQGCLL 239

Query: 4   V 2
           V
Sbjct: 240 V 240


>gb|AFV15381.1| AGO4A [Solanum lycopersicum]
          Length = 909

 Score =  194 bits (493), Expect = 6e-48
 Identities = 97/121 (80%), Positives = 107/121 (88%)
 Frame = -1

Query: 364 DTELGGKDFAYDGEKTLFTVGPLPQNKHDFTVVLEDISSNRAAANGSPKGSGSPDEGDRK 185
           DTEL GKDFAYDGEK+LFT+G LP+NK +FTVVL+D+ SNR   N SP G GSP+E DRK
Sbjct: 106 DTELAGKDFAYDGEKSLFTIGALPRNKMEFTVVLDDVISNRNNGNSSPGGHGSPNEADRK 165

Query: 184 RFRRPFQSKTFKVAISFAAKIPMKAIALALRGQESENSQDALRVLDIILRQHAAKQGCLL 5
           R RRP+QSKTFKV ISFAAKIPM+AIA ALRGQESENSQ+ALRVLDIILRQHAAKQGCLL
Sbjct: 166 RLRRPYQSKTFKVEISFAAKIPMQAIANALRGQESENSQEALRVLDIILRQHAAKQGCLL 225

Query: 4   V 2
           V
Sbjct: 226 V 226


>gb|ACZ04920.1| argonaute 4-like protein [Pelargonium x hortorum]
          Length = 933

 Score =  188 bits (478), Expect = 3e-46
 Identities = 97/121 (80%), Positives = 103/121 (85%)
 Frame = -1

Query: 364 DTELGGKDFAYDGEKTLFTVGPLPQNKHDFTVVLEDISSNRAAANGSPKGSGSPDEGDRK 185
           DTEL GKDFAYDGEK+LFTVGPLP+NKH+F VVLED+SSNR   N SP      D  DRK
Sbjct: 131 DTELAGKDFAYDGEKSLFTVGPLPRNKHEFIVVLEDVSSNRVNGNASPDAG---DGNDRK 187

Query: 184 RFRRPFQSKTFKVAISFAAKIPMKAIALALRGQESENSQDALRVLDIILRQHAAKQGCLL 5
           R RRPF SKTFKV ISFAAKIPM+AIA ALRGQESENSQ+ALRVLDIILRQHAAKQGCLL
Sbjct: 188 RMRRPFHSKTFKVEISFAAKIPMQAIANALRGQESENSQEALRVLDIILRQHAAKQGCLL 247

Query: 4   V 2
           V
Sbjct: 248 V 248


>gb|ABC61505.1| AGO4-2, partial [Nicotiana benthamiana]
          Length = 905

 Score =  187 bits (476), Expect = 6e-46
 Identities = 93/121 (76%), Positives = 105/121 (86%)
 Frame = -1

Query: 364 DTELGGKDFAYDGEKTLFTVGPLPQNKHDFTVVLEDISSNRAAANGSPKGSGSPDEGDRK 185
           DTEL GKDFAYDGEK+LFT+G LP+NK +FTVVLED++SNR   N SP     P+E DRK
Sbjct: 106 DTELAGKDFAYDGEKSLFTIGALPRNKMEFTVVLEDVTSNRNNGNSSPAADEGPNESDRK 165

Query: 184 RFRRPFQSKTFKVAISFAAKIPMKAIALALRGQESENSQDALRVLDIILRQHAAKQGCLL 5
           R RRP+QSK+FKV ISFAAKIPM+AIA ALRGQE+ENSQ+ALRVLDIILRQHAAKQGCLL
Sbjct: 166 RLRRPYQSKSFKVEISFAAKIPMQAIANALRGQETENSQEALRVLDIILRQHAAKQGCLL 225

Query: 4   V 2
           V
Sbjct: 226 V 226


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