BLASTX nr result

ID: Coptis25_contig00014431 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00014431
         (1034 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527602.1| nucleic acid binding protein, putative [Rici...   290   5e-76
ref|XP_002316904.1| predicted protein [Populus trichocarpa] gi|2...   288   1e-75
ref|XP_003543245.1| PREDICTED: uncharacterized protein LOC100778...   283   6e-74
emb|CBI20322.3| unnamed protein product [Vitis vinifera]              282   8e-74
ref|XP_002282222.1| PREDICTED: uncharacterized protein LOC100243...   282   8e-74

>ref|XP_002527602.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223533019|gb|EEF34783.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 327

 Score =  290 bits (741), Expect = 5e-76
 Identities = 143/167 (85%), Positives = 153/167 (91%), Gaps = 1/167 (0%)
 Frame = +3

Query: 357 AVTNSWGKYGIIREIDMWNKRPEFTAWLLEVKQVNLESLPNWEEKQMFKQFMEDHNTATF 536
           AVT+SWGKYG+IRE DMWNKRPEFTAWL EVKQVNLESLPNWEEKQMFK+FMEDHNTATF
Sbjct: 161 AVTDSWGKYGVIRETDMWNKRPEFTAWLAEVKQVNLESLPNWEEKQMFKEFMEDHNTATF 220

Query: 537 PSKKYYDLDAYHKRKMEKEMKKGY-KILETERTVFNDEEQRRHELMLAREKQKEEQVVAL 713
           PSKKYY+LDAY+KR+MEKEMKKG+ K  ETERTVFNDEEQRR ELM AREKQKE++V AL
Sbjct: 221 PSKKYYNLDAYYKRQMEKEMKKGFKKFQETERTVFNDEEQRRQELMRAREKQKEQEVEAL 280

Query: 714 KRSMQSGMAQAMKEQAQLREEMALHYKLGNSEAAAAIQRRLDPDVAM 854
           K SMQSGMAQAMKEQ QLREEMA  YKLGN EAAAAIQRRLDPD+ M
Sbjct: 281 KISMQSGMAQAMKEQTQLREEMAYQYKLGNFEAAAAIQRRLDPDIPM 327


>ref|XP_002316904.1| predicted protein [Populus trichocarpa] gi|222859969|gb|EEE97516.1|
           predicted protein [Populus trichocarpa]
          Length = 288

 Score =  288 bits (738), Expect = 1e-75
 Identities = 143/167 (85%), Positives = 153/167 (91%), Gaps = 1/167 (0%)
 Frame = +3

Query: 357 AVTNSWGKYGIIREIDMWNKRPEFTAWLLEVKQVNLESLPNWEEKQMFKQFMEDHNTATF 536
           AVTNSWGKYGIIRE DMWNKRPEFTAWL EVKQVNLE+LPNWEEKQMFKQFMEDHNTATF
Sbjct: 122 AVTNSWGKYGIIRETDMWNKRPEFTAWLAEVKQVNLETLPNWEEKQMFKQFMEDHNTATF 181

Query: 537 PSKKYYDLDAYHKRKMEKEMKKGY-KILETERTVFNDEEQRRHELMLAREKQKEEQVVAL 713
           PSKKYY+LDAY++ KMEKE+KKG+ K++ +ERTVFNDEEQRR ELM  REKQKE +V AL
Sbjct: 182 PSKKYYNLDAYYQHKMEKELKKGFKKVMASERTVFNDEEQRRQELMREREKQKEAEVEAL 241

Query: 714 KRSMQSGMAQAMKEQAQLREEMALHYKLGNSEAAAAIQRRLDPDVAM 854
           K SMQSGMAQAMKEQAQLREEMA  YKLGN EAAAAIQRRLDPDVAM
Sbjct: 242 KCSMQSGMAQAMKEQAQLREEMAYQYKLGNFEAAAAIQRRLDPDVAM 288


>ref|XP_003543245.1| PREDICTED: uncharacterized protein LOC100778706 [Glycine max]
          Length = 380

 Score =  283 bits (723), Expect = 6e-74
 Identities = 137/167 (82%), Positives = 152/167 (91%), Gaps = 1/167 (0%)
 Frame = +3

Query: 357 AVTNSWGKYGIIREIDMWNKRPEFTAWLLEVKQVNLESLPNWEEKQMFKQFMEDHNTATF 536
           AVTNSWGKYG+IRE DMW KRPEFTAWL EVKQVNLE++ NWEEKQMFK+FMEDHNTATF
Sbjct: 214 AVTNSWGKYGVIRETDMWTKRPEFTAWLAEVKQVNLENMSNWEEKQMFKEFMEDHNTATF 273

Query: 537 PSKKYYDLDAYHKRKMEKEMKKGY-KILETERTVFNDEEQRRHELMLAREKQKEEQVVAL 713
           PSKKYY+LDAY++R+MEKEMKKG+ K+  TERT+FNDEEQRR EL+ AREK KEEQV+AL
Sbjct: 274 PSKKYYNLDAYYRREMEKEMKKGFKKVQATERTIFNDEEQRRQELLQAREKHKEEQVMAL 333

Query: 714 KRSMQSGMAQAMKEQAQLREEMALHYKLGNSEAAAAIQRRLDPDVAM 854
           K SMQ+GMAQAMKEQAQLREEMA  YKLGN EAAAAIQRRLDPD A+
Sbjct: 334 KHSMQTGMAQAMKEQAQLREEMAYQYKLGNFEAAAAIQRRLDPDAAI 380


>emb|CBI20322.3| unnamed protein product [Vitis vinifera]
          Length = 687

 Score =  282 bits (722), Expect = 8e-74
 Identities = 141/167 (84%), Positives = 151/167 (90%), Gaps = 1/167 (0%)
 Frame = +3

Query: 357  AVTNSWGKYGIIREIDMWNKRPEFTAWLLEVKQVNLESLPNWEEKQMFKQFMEDHNTATF 536
            AVTNSWGKYGIIRE DMWNKRPEFTAWL E+KQVNLESLPNWEEKQMFK+FMEDHNTATF
Sbjct: 521  AVTNSWGKYGIIRESDMWNKRPEFTAWLAEIKQVNLESLPNWEEKQMFKEFMEDHNTATF 580

Query: 537  PSKKYYDLDAYHKRKMEKEMKKG-YKILETERTVFNDEEQRRHELMLAREKQKEEQVVAL 713
             SKKYY++DAY+++KME+EMKKG  K LETERTVFNDEEQRR EL   RE+ KE QV  L
Sbjct: 581  TSKKYYNIDAYYRQKMEREMKKGSKKALETERTVFNDEEQRRLELQRERERYKEVQVEEL 640

Query: 714  KRSMQSGMAQAMKEQAQLREEMALHYKLGNSEAAAAIQRRLDPDVAM 854
            KRSMQSGMAQAMKEQAQLREEMA  YK+GNSEAAAAIQRRLDPDVAM
Sbjct: 641  KRSMQSGMAQAMKEQAQLREEMAYQYKVGNSEAAAAIQRRLDPDVAM 687


>ref|XP_002282222.1| PREDICTED: uncharacterized protein LOC100243517 [Vitis vinifera]
          Length = 329

 Score =  282 bits (722), Expect = 8e-74
 Identities = 141/167 (84%), Positives = 151/167 (90%), Gaps = 1/167 (0%)
 Frame = +3

Query: 357 AVTNSWGKYGIIREIDMWNKRPEFTAWLLEVKQVNLESLPNWEEKQMFKQFMEDHNTATF 536
           AVTNSWGKYGIIRE DMWNKRPEFTAWL E+KQVNLESLPNWEEKQMFK+FMEDHNTATF
Sbjct: 163 AVTNSWGKYGIIRESDMWNKRPEFTAWLAEIKQVNLESLPNWEEKQMFKEFMEDHNTATF 222

Query: 537 PSKKYYDLDAYHKRKMEKEMKKG-YKILETERTVFNDEEQRRHELMLAREKQKEEQVVAL 713
            SKKYY++DAY+++KME+EMKKG  K LETERTVFNDEEQRR EL   RE+ KE QV  L
Sbjct: 223 TSKKYYNIDAYYRQKMEREMKKGSKKALETERTVFNDEEQRRLELQRERERYKEVQVEEL 282

Query: 714 KRSMQSGMAQAMKEQAQLREEMALHYKLGNSEAAAAIQRRLDPDVAM 854
           KRSMQSGMAQAMKEQAQLREEMA  YK+GNSEAAAAIQRRLDPDVAM
Sbjct: 283 KRSMQSGMAQAMKEQAQLREEMAYQYKVGNSEAAAAIQRRLDPDVAM 329


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