BLASTX nr result
ID: Coptis25_contig00014405
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00014405 (485 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_001189737.1| Aconitase/3-isopropylmalate dehydratase prot... 60 2e-07 ref|XP_002880023.1| aconitase C-terminal domain-containing prote... 60 2e-07 ref|NP_181837.1| Aconitase/3-isopropylmalate dehydratase protein... 60 2e-07 gb|ABK96460.1| unknown [Populus trichocarpa x Populus deltoides] 56 3e-06 gb|AFW72612.1| 3-isopropylmalate dehydratase small subunit 2 iso... 55 4e-06 >ref|NP_001189737.1| Aconitase/3-isopropylmalate dehydratase protein [Arabidopsis thaliana] gi|330255114|gb|AEC10208.1| Aconitase/3-isopropylmalate dehydratase protein [Arabidopsis thaliana] Length = 222 Score = 59.7 bits (143), Expect = 2e-07 Identities = 32/54 (59%), Positives = 37/54 (68%), Gaps = 6/54 (11%) Frame = -3 Query: 360 IGTYQTRFGEDKTGDVVTGKEYKLKPIGDAGPVIDAGG------KTGMIPSAAS 217 + T + R G+ + TGKEYKLKPIGDAGPVIDAGG K GMIPSAA+ Sbjct: 169 VATVELREGDSILINHTTGKEYKLKPIGDAGPVIDAGGIFAYARKAGMIPSAAA 222 >ref|XP_002880023.1| aconitase C-terminal domain-containing protein [Arabidopsis lyrata subsp. lyrata] gi|297325862|gb|EFH56282.1| aconitase C-terminal domain-containing protein [Arabidopsis lyrata subsp. lyrata] Length = 251 Score = 59.7 bits (143), Expect = 2e-07 Identities = 32/54 (59%), Positives = 37/54 (68%), Gaps = 6/54 (11%) Frame = -3 Query: 360 IGTYQTRFGEDKTGDVVTGKEYKLKPIGDAGPVIDAGG------KTGMIPSAAS 217 + T + R G+ + TGKEYKLKPIGDAGPVIDAGG K GMIPSAA+ Sbjct: 198 VATVELREGDSILINHTTGKEYKLKPIGDAGPVIDAGGIFAYARKAGMIPSAAA 251 >ref|NP_181837.1| Aconitase/3-isopropylmalate dehydratase protein [Arabidopsis thaliana] gi|3763918|gb|AAC64298.1| 3-isopropylmalate dehydratase, small subunit [Arabidopsis thaliana] gi|14334970|gb|AAK59662.1| putative 3-isopropylmalate dehydratase, small subunit [Arabidopsis thaliana] gi|17104629|gb|AAL34203.1| putative 3-isopropylmalate dehydratase, small subunit [Arabidopsis thaliana] gi|20197634|gb|AAM15163.1| 3-isopropylmalate dehydratase, small subunit [Arabidopsis thaliana] gi|21592696|gb|AAM64645.1| 3-isopropylmalate dehydratase, small subunit [Arabidopsis thaliana] gi|330255113|gb|AEC10207.1| Aconitase/3-isopropylmalate dehydratase protein [Arabidopsis thaliana] Length = 251 Score = 59.7 bits (143), Expect = 2e-07 Identities = 32/54 (59%), Positives = 37/54 (68%), Gaps = 6/54 (11%) Frame = -3 Query: 360 IGTYQTRFGEDKTGDVVTGKEYKLKPIGDAGPVIDAGG------KTGMIPSAAS 217 + T + R G+ + TGKEYKLKPIGDAGPVIDAGG K GMIPSAA+ Sbjct: 198 VATVELREGDSILINHTTGKEYKLKPIGDAGPVIDAGGIFAYARKAGMIPSAAA 251 >gb|ABK96460.1| unknown [Populus trichocarpa x Populus deltoides] Length = 255 Score = 56.2 bits (134), Expect = 3e-06 Identities = 33/57 (57%), Positives = 36/57 (63%), Gaps = 19/57 (33%) Frame = -3 Query: 333 EDKTGDVVT-------------GKEYKLKPIGDAGPVIDAGG------KTGMIPSAA 220 E KTGD++T GKEYKLKPIGDAGPVI+AGG KTGMIPS A Sbjct: 198 ECKTGDLITIELAESKLINHTSGKEYKLKPIGDAGPVIEAGGIFAYARKTGMIPSQA 254 >gb|AFW72612.1| 3-isopropylmalate dehydratase small subunit 2 isoform 1 [Zea mays] gi|413938062|gb|AFW72613.1| 3-isopropylmalate dehydratase small subunit 2 isoform 2 [Zea mays] gi|413938063|gb|AFW72614.1| 3-isopropylmalate dehydratase small subunit 2 isoform 3 [Zea mays] Length = 249 Score = 55.5 bits (132), Expect = 4e-06 Identities = 34/59 (57%), Positives = 37/59 (62%), Gaps = 19/59 (32%) Frame = -3 Query: 333 EDKTGDVVT-------------GKEYKLKPIGDAGPVIDAGG------KTGMIPSAASS 214 E KTGDVVT GKEYKLKPIGDAGPVI+AGG KTGMI S A++ Sbjct: 191 ECKTGDVVTVDLANSVFINHTSGKEYKLKPIGDAGPVIEAGGIFAYARKTGMIASKAAA 249