BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00014388
         (402 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis ...    73   3e-11
emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]    73   3e-11
ref|XP_002528337.1| conserved hypothetical protein [Ricinus comm...    70   1e-10
ref|XP_002306011.1| predicted protein [Populus trichocarpa] gi|2...    66   3e-09
ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|2...    66   3e-09

>ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis vinifera]
          Length = 389

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 40/89 (44%), Positives = 50/89 (56%), Gaps = 1/89 (1%)
 Frame = -3

Query: 394 KWVTVENLGNRSLFLGYNXXXXXXXXXXSGCKPNCIYFTDNLVFRFYECKFGGQDFGIFS 215
           +W  V +LG+R+LFLG N           GCK NCIY+TD+     Y+   G QD GIF+
Sbjct: 301 RWEVVSSLGDRALFLGENLSLSLSSVDFPGCKGNCIYYTDDYSEDNYDGIGGEQDLGIFN 360

Query: 214 LEDGSIEKFLYPDDNLLI-LPSPIWFAPN 131
           LEDGSIE    P  +  I  P P+W  PN
Sbjct: 361 LEDGSIEPL--PCSHFRIRWPPPLWVTPN 387


>emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]
          Length = 389

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 40/89 (44%), Positives = 50/89 (56%), Gaps = 1/89 (1%)
 Frame = -3

Query: 394 KWVTVENLGNRSLFLGYNXXXXXXXXXXSGCKPNCIYFTDNLVFRFYECKFGGQDFGIFS 215
           +W  V +LG+R+LFLG N           GCK NCIY+TD+     Y+   G QD GIF+
Sbjct: 301 RWEVVSSLGDRALFLGENLSLSLSSVDFPGCKGNCIYYTDDYSEDNYDGIGGEQDLGIFN 360

Query: 214 LEDGSIEKFLYPDDNLLI-LPSPIWFAPN 131
           LEDGSIE    P  +  I  P P+W  PN
Sbjct: 361 LEDGSIEPL--PCSHFRIRWPPPLWVTPN 387


>ref|XP_002528337.1| conserved hypothetical protein [Ricinus communis]
           gi|223532205|gb|EEF34009.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 102

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 39/88 (44%), Positives = 49/88 (55%), Gaps = 1/88 (1%)
 Frame = -3

Query: 391 WVTVENLGNRSLFLGYNXXXXXXXXXXSGCKPNCIYFTDNLVFRFYE-CKFGGQDFGIFS 215
           WV VE+L N+ LFLG N          SGC  N IYFTD+ +++ YE   +GG DFG FS
Sbjct: 14  WVEVESLNNQVLFLGMNHSMSLSAQDFSGCDRNSIYFTDDNLYQMYEDYSYGGHDFGKFS 73

Query: 214 LEDGSIEKFLYPDDNLLILPSPIWFAPN 131
           LED  + K         + PSP+W  PN
Sbjct: 74  LED-KVVKLFNGHKIEKVDPSPLWIVPN 100


>ref|XP_002306011.1| predicted protein [Populus trichocarpa] gi|222848975|gb|EEE86522.1|
           predicted protein [Populus trichocarpa]
          Length = 462

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 34/88 (38%), Positives = 51/88 (57%), Gaps = 1/88 (1%)
 Frame = -3

Query: 391 WVTVENLGNRSLFLGYNXXXXXXXXXXSGCKPNCIYFTDNLVFRFYE-CKFGGQDFGIFS 215
           WV++ +L ++++F+G N           GC+ N +YFTD+   R  E   +GG D G+F+
Sbjct: 374 WVSMTSLDDQAVFVGGNHSASVLTCDLPGCEKNSVYFTDDYWERMNEDYLYGGHDMGVFN 433

Query: 214 LEDGSIEKFLYPDDNLLILPSPIWFAPN 131
           L+D S++ F Y  D L I P P WF PN
Sbjct: 434 LKDKSVKHF-YQLDALKIQPPPCWFLPN 460


>ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|222842400|gb|EEE79947.1|
           predicted protein [Populus trichocarpa]
          Length = 393

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 36/91 (39%), Positives = 48/91 (52%), Gaps = 3/91 (3%)
 Frame = -3

Query: 394 KWVTVENLGNRSLFLGYNXXXXXXXXXXSGCKPNCIYFTDNLVFRFYECKFGGQDFGIFS 215
           +W  V +LG+  LF+G N          SGC  +CIY+TD+     Y+   G  D GIF 
Sbjct: 301 RWERVTSLGDMMLFIGENSSLALSASGLSGCMGDCIYYTDDYSANNYDGHIGEHDLGIFK 360

Query: 214 LEDGSIEKF-LYPDDNL--LILPSPIWFAPN 131
           L DGSIE    YP ++   L  P P+W +PN
Sbjct: 361 LSDGSIEPLPCYPRNSYSRLQWPPPLWISPN 391