BLASTX nr result
ID: Coptis25_contig00014384
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00014384
(337 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003530713.1| PREDICTED: pentatricopeptide repeat-containi... 95 5e-18
ref|XP_002987124.1| hypothetical protein SELMODRAFT_125444 [Sela... 95 5e-18
ref|XP_002300166.1| predicted protein [Populus trichocarpa] gi|2... 95 7e-18
ref|XP_002984475.1| hypothetical protein SELMODRAFT_180944 [Sela... 94 9e-18
ref|XP_003545819.1| PREDICTED: pentatricopeptide repeat-containi... 94 1e-17
>ref|XP_003530713.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Glycine max]
Length = 705
Score = 95.1 bits (235), Expect = 5e-18
Identities = 48/110 (43%), Positives = 69/110 (62%)
Frame = +2
Query: 2 MPNKNEVTWTSIISIYSQSGFVKEALGLYKLMRLESCVRPNAFTYTIALNLCAKLRNLRV 181
MP K+ W ++IS Y QSG KEAL + LMR PN+ T T A++ CA+L +L
Sbjct: 167 MPEKDVACWNTVISCYYQSGNFKEALEYFGLMRRFG-FEPNSVTITTAISSCARLLDLNR 225
Query: 182 GIEIHEDIVKDGCEGDEFIITALIDMYSKCGRIDNACRVFSKVSEPTIAA 331
G+EIHE+++ G D FI +AL+DMY KCG ++ A VF ++ + T+ A
Sbjct: 226 GMEIHEELINSGFLLDSFISSALVDMYGKCGHLEMAIEVFEQMPKKTVVA 275
Score = 80.1 bits (196), Expect = 2e-13
Identities = 43/112 (38%), Positives = 66/112 (58%)
Frame = +2
Query: 2 MPNKNEVTWTSIISIYSQSGFVKEALGLYKLMRLESCVRPNAFTYTIALNLCAKLRNLRV 181
+P V+W +IS Y G + EALGL+ MR +S V P+A T+T L C++L L
Sbjct: 369 IPKSKVVSWNVMISGYVAEGKLFEALGLFSEMR-KSYVEPDAITFTSVLTACSQLAALEK 427
Query: 182 GIEIHEDIVKDGCEGDEFIITALIDMYSKCGRIDNACRVFSKVSEPTIAACT 337
G EIH I++ + +E ++ AL+DMY+KCG +D A VF + + + + T
Sbjct: 428 GEEIHNLIIEKKLDNNEVVMGALLDMYAKCGAVDEAFSVFKCLPKRDLVSWT 479
Score = 60.1 bits (144), Expect = 2e-07
Identities = 32/110 (29%), Positives = 58/110 (52%)
Frame = +2
Query: 2 MPNKNEVTWTSIISIYSQSGFVKEALGLYKLMRLESCVRPNAFTYTIALNLCAKLRNLRV 181
MP K V W S+IS Y G + L+K M E V+P T + + +C++ L
Sbjct: 268 MPKKTVVAWNSMISGYGLKGDSISCIQLFKRMYNEG-VKPTLTTLSSLIMVCSRSARLLE 326
Query: 182 GIEIHEDIVKDGCEGDEFIITALIDMYSKCGRIDNACRVFSKVSEPTIAA 331
G +H +++ + D FI ++L+D+Y KCG+++ A +F + + + +
Sbjct: 327 GKFVHGYTIRNRIQSDVFINSSLMDLYFKCGKVELAENIFKLIPKSKVVS 376
Score = 56.6 bits (135), Expect = 2e-06
Identities = 31/110 (28%), Positives = 60/110 (54%), Gaps = 1/110 (0%)
Frame = +2
Query: 2 MPNKNEVT-WTSIISIYSQSGFVKEALGLYKLMRLESCVRPNAFTYTIALNLCAKLRNLR 178
M N E++ W +++ Y+++ EAL L++ + ++P+++TY L C L
Sbjct: 64 MENPCEISLWNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVLKACGGLYKYV 123
Query: 179 VGIEIHEDIVKDGCEGDEFIITALIDMYSKCGRIDNACRVFSKVSEPTIA 328
+G IH +VK G D + ++L+ MY+KC + A +F+++ E +A
Sbjct: 124 LGKMIHTCLVKTGLMMDIVVGSSLVGMYAKCNAFEKAIWLFNEMPEKDVA 173
>ref|XP_002987124.1| hypothetical protein SELMODRAFT_125444 [Selaginella moellendorffii]
gi|300145021|gb|EFJ11700.1| hypothetical protein
SELMODRAFT_125444 [Selaginella moellendorffii]
Length = 399
Score = 95.1 bits (235), Expect = 5e-18
Identities = 44/101 (43%), Positives = 64/101 (63%)
Frame = +2
Query: 11 KNEVTWTSIISIYSQSGFVKEALGLYKLMRLESCVRPNAFTYTIALNLCAKLRNLRVGIE 190
+N V W +II IY+Q GF +EA+ LY+ M+ E V+P+ T+ LN CA L LR+G
Sbjct: 113 RNSVCWNAIIGIYAQHGFGEEAMALYQRMKAEKVVKPDEVTFINVLNACANLGELRIGKM 172
Query: 191 IHEDIVKDGCEGDEFIITALIDMYSKCGRIDNACRVFSKVS 313
+HEDI G +GD ++ AL++MY +CG + A VF +S
Sbjct: 173 VHEDISYHGLDGDIILLNALLNMYGRCGSLKLAREVFDSMS 213
>ref|XP_002300166.1| predicted protein [Populus trichocarpa] gi|222847424|gb|EEE84971.1|
predicted protein [Populus trichocarpa]
Length = 719
Score = 94.7 bits (234), Expect = 7e-18
Identities = 48/112 (42%), Positives = 72/112 (64%)
Frame = +2
Query: 2 MPNKNEVTWTSIISIYSQSGFVKEALGLYKLMRLESCVRPNAFTYTIALNLCAKLRNLRV 181
MP KN V+WT+++ +S++G ++AL ++ M LE VRPNAFT AL+ CAK+ L
Sbjct: 307 MPEKNVVSWTTMVDGFSRNGDSEKALSMFSKM-LEEGVRPNAFTIVSALSACAKIGGLEA 365
Query: 182 GIEIHEDIVKDGCEGDEFIITALIDMYSKCGRIDNACRVFSKVSEPTIAACT 337
G+ IH+ I +G E + TAL+DMY+KCG I++A VF + + +I T
Sbjct: 366 GLRIHKYIKDNGLHLTEALGTALVDMYAKCGNIESASEVFGETEQKSIRTWT 417
>ref|XP_002984475.1| hypothetical protein SELMODRAFT_180944 [Selaginella moellendorffii]
gi|300147863|gb|EFJ14525.1| hypothetical protein
SELMODRAFT_180944 [Selaginella moellendorffii]
Length = 592
Score = 94.4 bits (233), Expect = 9e-18
Identities = 49/105 (46%), Positives = 72/105 (68%), Gaps = 1/105 (0%)
Frame = +2
Query: 2 MPNKNEVTWTSIISIYSQSGFVKEALGLYK-LMRLESCVRPNAFTYTIALNLCAKLRNLR 178
MP +NE +W IIS Y +G +EAL LY+ L+R + ++P+AF ++ AL CA+L+ L
Sbjct: 73 MPLRNEFSWAIIISAYVGAGKEQEALCLYRALVRSSTEIQPDAFIFSSALAACARLKCLE 132
Query: 179 VGIEIHEDIVKDGCEGDEFIITALIDMYSKCGRIDNACRVFSKVS 313
G+EIHE IVK G + D + AL+ MY+KCGRID A +VF +++
Sbjct: 133 QGLEIHEQIVKRGIKQDVGLQNALVTMYAKCGRIDRAKQVFDRIT 177
>ref|XP_003545819.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Glycine max]
Length = 705
Score = 93.6 bits (231), Expect = 1e-17
Identities = 46/110 (41%), Positives = 69/110 (62%)
Frame = +2
Query: 2 MPNKNEVTWTSIISIYSQSGFVKEALGLYKLMRLESCVRPNAFTYTIALNLCAKLRNLRV 181
MP K+ W ++IS Y QSG K+AL + LMR PN+ T T A++ CA+L +L
Sbjct: 167 MPEKDVACWNTVISCYYQSGNFKDALEYFGLMRRFG-FEPNSVTITTAISSCARLLDLNR 225
Query: 182 GIEIHEDIVKDGCEGDEFIITALIDMYSKCGRIDNACRVFSKVSEPTIAA 331
G+EIHE+++ G D FI +AL+DMY KCG ++ A +F ++ + T+ A
Sbjct: 226 GMEIHEELINSGFLLDSFISSALVDMYGKCGHLEMAIEIFEQMPKKTVVA 275
Score = 77.0 bits (188), Expect = 1e-12
Identities = 42/112 (37%), Positives = 65/112 (58%)
Frame = +2
Query: 2 MPNKNEVTWTSIISIYSQSGFVKEALGLYKLMRLESCVRPNAFTYTIALNLCAKLRNLRV 181
+P V+W +IS Y G + EALGL+ MR +S V +A T+T L C++L L
Sbjct: 369 IPKSKVVSWNVMISGYVAEGKLFEALGLFSEMR-KSYVESDAITFTSVLTACSQLAALEK 427
Query: 182 GIEIHEDIVKDGCEGDEFIITALIDMYSKCGRIDNACRVFSKVSEPTIAACT 337
G EIH I++ + +E ++ AL+DMY+KCG +D A VF + + + + T
Sbjct: 428 GKEIHNLIIEKKLDNNEVVMGALLDMYAKCGAVDEAFSVFKCLPKRDLVSWT 479
Score = 61.6 bits (148), Expect = 6e-08
Identities = 31/110 (28%), Positives = 60/110 (54%)
Frame = +2
Query: 2 MPNKNEVTWTSIISIYSQSGFVKEALGLYKLMRLESCVRPNAFTYTIALNLCAKLRNLRV 181
MP K V W S+IS Y G + + L+K M E V+P T + + +C++ L
Sbjct: 268 MPKKTVVAWNSMISGYGLKGDIISCIQLFKRMYNEG-VKPTLTTLSSLIMVCSRSARLLE 326
Query: 182 GIEIHEDIVKDGCEGDEFIITALIDMYSKCGRIDNACRVFSKVSEPTIAA 331
G +H +++ + D F+ ++L+D+Y KCG+++ A ++F + + + +
Sbjct: 327 GKFVHGYTIRNRIQPDVFVNSSLMDLYFKCGKVELAEKIFKLIPKSKVVS 376
Score = 55.1 bits (131), Expect = 6e-06
Identities = 29/110 (26%), Positives = 58/110 (52%), Gaps = 1/110 (0%)
Frame = +2
Query: 2 MPNKNEVT-WTSIISIYSQSGFVKEALGLYKLMRLESCVRPNAFTYTIALNLCAKLRNLR 178
M N E++ W +++ Y+++ EAL L++ + ++P+++TY C L
Sbjct: 64 MENPCEISLWNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVFKACGGLHRYV 123
Query: 179 VGIEIHEDIVKDGCEGDEFIITALIDMYSKCGRIDNACRVFSKVSEPTIA 328
+G IH ++K G D + ++L+ MY KC + A +F+++ E +A
Sbjct: 124 LGKMIHTCLIKTGLMMDIVVGSSLVGMYGKCNAFEKAIWLFNEMPEKDVA 173