BLASTX nr result

ID: Coptis25_contig00014381 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00014381
         (1051 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266561.1| PREDICTED: protein cornichon homolog 4 [Viti...   197   3e-48
ref|XP_004147951.1| PREDICTED: probable protein cornichon homolo...   197   5e-48
ref|XP_002303539.1| predicted protein [Populus trichocarpa] gi|2...   197   5e-48
ref|XP_002889932.1| cornichon family protein [Arabidopsis lyrata...   196   1e-47
ref|XP_002329887.1| predicted protein [Populus trichocarpa] gi|2...   195   2e-47

>ref|XP_002266561.1| PREDICTED: protein cornichon homolog 4 [Vitis vinifera]
           gi|297742670|emb|CBI34819.3| unnamed protein product
           [Vitis vinifera]
          Length = 138

 Score =  197 bits (502), Expect = 3e-48
 Identities = 92/116 (79%), Positives = 100/116 (86%)
 Frame = -3

Query: 776 VVYQLMCLADLEFDYINPYDSASRINRVVLPEFIAQGVLCLLFLVTGHWIMFLLSVPYLY 597
           VVYQLMCLADLEFDYINPYDSASRIN+VVLPEFI QGVLCL + +TGHW M LL  PYLY
Sbjct: 21  VVYQLMCLADLEFDYINPYDSASRINKVVLPEFITQGVLCLFYSLTGHWFMSLLCGPYLY 80

Query: 596 YNARLYMRRQHLVDITEIFNQLNWEKKQRLVKLVYLVILLFLCIFWMIYSVLDDHE 429
           YN RLY RRQHL+D+TEIFN LNWEKKQRL KL YL+ LLFL IFWMI S L+DH+
Sbjct: 81  YNVRLYQRRQHLIDVTEIFNLLNWEKKQRLFKLGYLIFLLFLSIFWMILSALEDHD 136


>ref|XP_004147951.1| PREDICTED: probable protein cornichon homolog 2-like isoform 1
           [Cucumis sativus] gi|449494293|ref|XP_004159504.1|
           PREDICTED: probable protein cornichon homolog 2-like
           isoform 1 [Cucumis sativus]
          Length = 136

 Score =  197 bits (500), Expect = 5e-48
 Identities = 89/116 (76%), Positives = 102/116 (87%)
 Frame = -3

Query: 776 VVYQLMCLADLEFDYINPYDSASRINRVVLPEFIAQGVLCLLFLVTGHWIMFLLSVPYLY 597
           +VYQLMCLADLEFDYINP+DSASRIN+V++PEFI  GVLCL +L+TGHW M LLS PY+Y
Sbjct: 21  LVYQLMCLADLEFDYINPFDSASRINKVIMPEFIVMGVLCLFYLLTGHWGMSLLSGPYIY 80

Query: 596 YNARLYMRRQHLVDITEIFNQLNWEKKQRLVKLVYLVILLFLCIFWMIYSVLDDHE 429
           YN RLY+RRQHL+D+TEIFN LNWEKKQRL KL YLV+LLFL IFWMIY  L+D E
Sbjct: 81  YNVRLYLRRQHLIDVTEIFNMLNWEKKQRLFKLAYLVVLLFLSIFWMIYHALEDDE 136


>ref|XP_002303539.1| predicted protein [Populus trichocarpa] gi|222840971|gb|EEE78518.1|
           predicted protein [Populus trichocarpa]
          Length = 138

 Score =  197 bits (500), Expect = 5e-48
 Identities = 90/117 (76%), Positives = 103/117 (88%)
 Frame = -3

Query: 776 VVYQLMCLADLEFDYINPYDSASRINRVVLPEFIAQGVLCLLFLVTGHWIMFLLSVPYLY 597
           V++QLM LADLEFDYINPYDS+SRIN+V+LPE+I +GVLCL FLVTGHW M LL VPYLY
Sbjct: 21  VIFQLMALADLEFDYINPYDSSSRINKVILPEYITEGVLCLFFLVTGHWCMSLLCVPYLY 80

Query: 596 YNARLYMRRQHLVDITEIFNQLNWEKKQRLVKLVYLVILLFLCIFWMIYSVLDDHEY 426
           YNARLY RRQHLVD+TEIFN LNWEKKQRL KL YL++LLFL IFWMI + L+D +Y
Sbjct: 81  YNARLYTRRQHLVDVTEIFNMLNWEKKQRLFKLGYLIVLLFLSIFWMILTALEDSDY 137


>ref|XP_002889932.1| cornichon family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297335774|gb|EFH66191.1| cornichon family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 137

 Score =  196 bits (497), Expect = 1e-47
 Identities = 89/116 (76%), Positives = 103/116 (88%)
 Frame = -3

Query: 776 VVYQLMCLADLEFDYINPYDSASRINRVVLPEFIAQGVLCLLFLVTGHWIMFLLSVPYLY 597
           +VYQL+CLADLEFDYINPYDSASRIN VVLPEFI QGVLC+ +L+TGHW+M LL +PYLY
Sbjct: 21  IVYQLVCLADLEFDYINPYDSASRINSVVLPEFIVQGVLCVFYLLTGHWVMTLLCLPYLY 80

Query: 596 YNARLYMRRQHLVDITEIFNQLNWEKKQRLVKLVYLVILLFLCIFWMIYSVLDDHE 429
           YN +LY +RQHLVD+TEIFN LNWEKK+RL KL Y+V+ LFL IFWMIYS LDD+E
Sbjct: 81  YNFQLYSKRQHLVDVTEIFNLLNWEKKKRLFKLAYIVLNLFLTIFWMIYSALDDYE 136


>ref|XP_002329887.1| predicted protein [Populus trichocarpa] gi|222871124|gb|EEF08255.1|
           predicted protein [Populus trichocarpa]
          Length = 138

 Score =  195 bits (495), Expect = 2e-47
 Identities = 87/117 (74%), Positives = 103/117 (88%)
 Frame = -3

Query: 776 VVYQLMCLADLEFDYINPYDSASRINRVVLPEFIAQGVLCLLFLVTGHWIMFLLSVPYLY 597
           V++QLM LADLEFDYINPYDS+SRIN+V+LPE+I +GVLCL FL+TGHW M LL +PYLY
Sbjct: 21  VIFQLMALADLEFDYINPYDSSSRINKVILPEYITEGVLCLFFLITGHWCMSLLCIPYLY 80

Query: 596 YNARLYMRRQHLVDITEIFNQLNWEKKQRLVKLVYLVILLFLCIFWMIYSVLDDHEY 426
           YN RLY +RQHLVD+TEIFN LNWEKKQRL KL YLV+LLFL IFWMI++ L+D +Y
Sbjct: 81  YNVRLYTQRQHLVDVTEIFNMLNWEKKQRLFKLGYLVVLLFLSIFWMIFTALEDSDY 137


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