BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00014359
         (400 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16200.3| unnamed protein product [Vitis vinifera]              184   7e-45
ref|XP_002531104.1| DNA repair and recombination protein radB, p...   182   2e-44
ref|XP_002281461.2| PREDICTED: DNA repair protein RAD51 homolog ...   179   2e-43
ref|NP_001242445.1| uncharacterized protein LOC100780427 [Glycin...   167   6e-40
emb|CAN80345.1| hypothetical protein VITISV_003133 [Vitis vinifera]   167   6e-40

>emb|CBI16200.3| unnamed protein product [Vitis vinifera]
          Length = 1093

 Score =  184 bits (467), Expect = 7e-45
 Identities = 86/128 (67%), Positives = 108/128 (84%)
 Frame = -1

Query: 400 SVFDIFGLLDVLNHLEFTLRSQGKTGGGKLRLLVIDSISSLITPVLGGGGAHGHCLMVST 221
           SVFDIF +LDV++ LE++LRSQ +TG  ++RLL++DSISSLITP+LGG G+HG  LM+S 
Sbjct: 236 SVFDIFAMLDVVHQLEYSLRSQVQTGADQVRLLIVDSISSLITPILGGSGSHGRALMISA 295

Query: 220 GFLLKKLAHEHSLCVLVANHMVSGEGGSSKPALGESWKNVSHVRILLSHDQESNLCNVSI 41
           GFLLKKLAHEH+L V+V NHMV GEGG  KPALGESWK++ HVR+LLS D  S++C++SI
Sbjct: 296 GFLLKKLAHEHNLAVVVTNHMVGGEGGILKPALGESWKSIPHVRLLLSRDPGSSICHMSI 355

Query: 40  LKHPCMVC 17
           LKH  MVC
Sbjct: 356 LKHSYMVC 363


>ref|XP_002531104.1| DNA repair and recombination protein radB, putative [Ricinus
           communis] gi|223529300|gb|EEF31269.1| DNA repair and
           recombination protein radB, putative [Ricinus communis]
          Length = 315

 Score =  182 bits (462), Expect = 2e-44
 Identities = 85/124 (68%), Positives = 104/124 (83%)
 Frame = -1

Query: 400 SVFDIFGLLDVLNHLEFTLRSQGKTGGGKLRLLVIDSISSLITPVLGGGGAHGHCLMVST 221
           SVFDIF + DVL+ LE +LRSQG +G  K++ L++DSISSLITP+LGGGG+ GH LM S 
Sbjct: 178 SVFDIFSMFDVLHQLEISLRSQGHSGDFKVQSLIVDSISSLITPILGGGGSQGHALMTSA 237

Query: 220 GFLLKKLAHEHSLCVLVANHMVSGEGGSSKPALGESWKNVSHVRILLSHDQESNLCNVSI 41
           G LLKKLAHEH++ VLV NHMV+GEGG+ KPALGESWK++ HVR+LLS DQ  N+CNV+I
Sbjct: 238 GILLKKLAHEHNIAVLVTNHMVAGEGGNFKPALGESWKSIPHVRLLLSRDQGKNVCNVTI 297

Query: 40  LKHP 29
           LKHP
Sbjct: 298 LKHP 301


>ref|XP_002281461.2| PREDICTED: DNA repair protein RAD51 homolog 4-like [Vitis vinifera]
          Length = 326

 Score =  179 bits (455), Expect = 2e-43
 Identities = 85/131 (64%), Positives = 108/131 (82%)
 Frame = -1

Query: 400 SVFDIFGLLDVLNHLEFTLRSQGKTGGGKLRLLVIDSISSLITPVLGGGGAHGHCLMVST 221
           SVFDIF +LDV++ LE++LRSQ +TG  ++RLL++DSISSLITP+LGG G+HG  LM+S 
Sbjct: 177 SVFDIFAMLDVVHQLEYSLRSQVQTGADQVRLLIVDSISSLITPILGGSGSHGRALMISA 236

Query: 220 GFLLKKLAHEHSLCVLVANHMVSGEGGSSKPALGESWKNVSHVRILLSHDQESNLCNVSI 41
           GFLLKKLAHEH+L V+V NHMV GEGG  KPALGESWK++ HVR+LLS D  S++C++SI
Sbjct: 237 GFLLKKLAHEHNLAVVVTNHMVGGEGGILKPALGESWKSIPHVRLLLSRDPGSSICHMSI 296

Query: 40  LKHPCMVCYSY 8
           LKH  M   S+
Sbjct: 297 LKHSYMENLSF 307


>ref|NP_001242445.1| uncharacterized protein LOC100780427 [Glycine max]
           gi|255635337|gb|ACU18022.1| unknown [Glycine max]
          Length = 325

 Score =  167 bits (424), Expect = 6e-40
 Identities = 80/129 (62%), Positives = 100/129 (77%)
 Frame = -1

Query: 400 SVFDIFGLLDVLNHLEFTLRSQGKTGGGKLRLLVIDSISSLITPVLGGGGAHGHCLMVST 221
           SVFD++ + DVL+ L+  LRS+       +RLL++DSISSLITP+LGG G  GH LM+S 
Sbjct: 184 SVFDVYQMFDVLHQLKINLRSEIVKSNQHVRLLIVDSISSLITPILGGSGPQGHALMISA 243

Query: 220 GFLLKKLAHEHSLCVLVANHMVSGEGGSSKPALGESWKNVSHVRILLSHDQESNLCNVSI 41
           GFLLKKLAHEH++ VLV NH+V G+ G SK A+GESWK+V HVRILLS D  SN+CN+SI
Sbjct: 244 GFLLKKLAHEHNIAVLVTNHVVGGDDGISKTAMGESWKSVPHVRILLSRDCGSNVCNISI 303

Query: 40  LKHPCMVCY 14
           LK P MVC+
Sbjct: 304 LKPPSMVCH 312


>emb|CAN80345.1| hypothetical protein VITISV_003133 [Vitis vinifera]
          Length = 1051

 Score =  167 bits (424), Expect = 6e-40
 Identities = 84/145 (57%), Positives = 106/145 (73%), Gaps = 19/145 (13%)
 Frame = -1

Query: 400 SVFDIFGLLDVLNHLEFTLRSQGKTGGGKLRLLVIDSISSLITPVLGGGGAHGHCLMVST 221
           SVFDIF +LDV++ LE++LRSQ +TG  ++RLL++DSISSLITP+LGG G+HG  LM+S 
Sbjct: 184 SVFDIFAMLDVVHQLEYSLRSQVQTGADQVRLLIVDSISSLITPILGGSGSHGRALMISA 243

Query: 220 GFLLKKLAHEHSLCVL-------------------VANHMVSGEGGSSKPALGESWKNVS 98
           GFLLKKLAHEH+L V+                   V NHMV GEGG  KPALGESWK++ 
Sbjct: 244 GFLLKKLAHEHNLAVVPIIKVSILTIITIMIHWLKVTNHMVGGEGGILKPALGESWKSIP 303

Query: 97  HVRILLSHDQESNLCNVSILKHPCM 23
           HVR+LLS D  S++C++SILKH  M
Sbjct: 304 HVRLLLSRDPGSSICHMSILKHSYM 328