BLASTX nr result

ID: Coptis25_contig00014352 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00014352
         (1347 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003559250.1| PREDICTED: uncharacterized protein LOC100841...   304   4e-80
ref|NP_001141140.1| hypothetical protein [Zea mays] gi|194702846...   304   4e-80
ref|XP_004148587.1| PREDICTED: uncharacterized protein LOC101205...   298   2e-78
ref|XP_002466212.1| hypothetical protein SORBIDRAFT_01g003600 [S...   296   6e-78
ref|NP_001051693.1| Os03g0816500 [Oryza sativa Japonica Group] g...   286   8e-75

>ref|XP_003559250.1| PREDICTED: uncharacterized protein LOC100841984 [Brachypodium
            distachyon]
          Length = 391

 Score =  304 bits (778), Expect = 4e-80
 Identities = 157/264 (59%), Positives = 194/264 (73%), Gaps = 3/264 (1%)
 Frame = +2

Query: 389  PFHICVKPHGPPVLKPSLFVSNRQKRGEIERSINNDPRKTILRPGMVLLKNYISPADQIK 568
            PF IC        +KPSL   NR+KR   ERS N+  +   LRPGMVLLKN++ P DQI+
Sbjct: 129  PFDICGDSKCSVNVKPSLLEINREKRRAKERS-NSVAQLQHLRPGMVLLKNFLKPDDQIE 187

Query: 569  IIKTCEQLG-GEDGFYQPGYNDGAKLRLHMMCLGKDWDPEQRSYGDIRS-DGFKPPIIPA 742
            II  C ++G G+ GFY PGY DGAKL L MMCLGKDW+P+  SYGD+R+ DG +PP IP 
Sbjct: 188  IINLCREVGVGKGGFYTPGYRDGAKLSLRMMCLGKDWNPDSSSYGDVRAFDGAEPPEIPE 247

Query: 743  ELKGIVSDAILASHAKMRDL-GEKNPHEAVPCMEPDICIVNFYTNSGKLGLHQDRDESTE 919
            + K +V  AI ASH  ++   G  NP   +P M PDICIVNFYT+ G+LGLHQD+DES +
Sbjct: 248  KFKELVQGAIGASHEFLKGRKGTSNPSVELPPMSPDICIVNFYTSRGRLGLHQDKDESQD 307

Query: 920  SIEKGLPVVSFSIGDSAEFLYGDDRDPEQAKKVELNSGDVVIFGGKSRLIFHGVPSIIPD 1099
            S+ KGLPVVSFS+GD+AEFLYGD RD  +A KV+L +GDV+IFGG+SR IFHGV  I P 
Sbjct: 308  SLTKGLPVVSFSLGDTAEFLYGDSRDDTKASKVDLETGDVLIFGGESRRIFHGVSQIKPK 367

Query: 1100 SAPKVLAEKANLRPGRLNLTFRKF 1171
            +APK L +K+NL+PGRLNLTFRK+
Sbjct: 368  TAPKWLTDKSNLQPGRLNLTFRKY 391


>ref|NP_001141140.1| hypothetical protein [Zea mays] gi|194702846|gb|ACF85507.1| unknown
            [Zea mays] gi|413932645|gb|AFW67196.1| hypothetical
            protein ZEAMMB73_974323 [Zea mays]
          Length = 345

 Score =  304 bits (778), Expect = 4e-80
 Identities = 170/338 (50%), Positives = 223/338 (65%), Gaps = 4/338 (1%)
 Frame = +2

Query: 170  PHEMKVVDYSSDPRRHYQNASRGKGMTSRAKSPDRVIQQKGRASVKMSPKRKMSPKREDG 349
            PH   V   SS+PR+  Q+A       S   S  +V        V ++P +   P    G
Sbjct: 21   PHG-SVYGSSSEPRK--QDACTFSPSVSSKDSLHKV--------VTLTPVQPQKPVDSRG 69

Query: 350  QHSPEHTDTKTIPPFHICVKPHGPPV-LKPSLFVSNRQKRGEIERSINNDPRKTILRPGM 526
             H    +D+   P F IC+  +   V LKPS+F +NR+++ + +R  + D R   LRPGM
Sbjct: 70   SHCNAGSDSGEAP-FDICMSGNKCAVKLKPSIFETNRERK-QRDRECSKDVRPLQLRPGM 127

Query: 527  VLLKNYISPADQIKIIKTCEQLG-GEDGFYQPGYNDGAKLRLHMMCLGKDWDPEQRSYGD 703
            VLLK +I P DQ+KI+K C QLG G  GFY+PGY +GA L+L MMCLGK+WDP+  SYGD
Sbjct: 128  VLLKRFIKPNDQVKIVKLCSQLGVGPGGFYRPGYRNGALLKLWMMCLGKNWDPDSSSYGD 187

Query: 704  IRS-DGFKPPIIPAELKGIVSDAILASHAKMRDL-GEKNPHEAVPCMEPDICIVNFYTNS 877
             R  DG +PP IP E +  V D I ASH  ++   G  N  + +P M PDICIVNFY +S
Sbjct: 188  RRLFDGAQPPTIPEEFQKFVQDGIQASHEFLKQQKGATNVVQEIPAMSPDICIVNFYNSS 247

Query: 878  GKLGLHQDRDESTESIEKGLPVVSFSIGDSAEFLYGDDRDPEQAKKVELNSGDVVIFGGK 1057
            G+LGLHQD+DES  S++KGLPVVSFSIG++AEF++GD RD E+  KV+L SGDV+IFGG+
Sbjct: 248  GRLGLHQDKDESQSSLDKGLPVVSFSIGETAEFMFGDVRDEEKISKVDLESGDVLIFGGE 307

Query: 1058 SRLIFHGVPSIIPDSAPKVLAEKANLRPGRLNLTFRKF 1171
            SRLIFHGV +  P +APK L ++ +LRPGRLNLTFR++
Sbjct: 308  SRLIFHGVNNTKPKTAPKWLTDETSLRPGRLNLTFRQY 345


>ref|XP_004148587.1| PREDICTED: uncharacterized protein LOC101205291 [Cucumis sativus]
            gi|449516744|ref|XP_004165406.1| PREDICTED:
            uncharacterized protein LOC101224716 [Cucumis sativus]
          Length = 502

 Score =  298 bits (764), Expect = 2e-78
 Identities = 159/285 (55%), Positives = 196/285 (68%), Gaps = 6/285 (2%)
 Frame = +2

Query: 335  KREDGQHSPEHTDTKT---IPPFHICVKPHGPPVLKPSLFVSNRQKRGEIERSINNDPRK 505
            K  D  +S +  D K    +  F IC    G  +L PSL   NR+KR E+ R++  +   
Sbjct: 219  KSNDVFNSTDSKDKKPSVDLDSFDICPPKTGGVMLNPSLLAMNREKRNEMRRAMEGN-NG 277

Query: 506  TILRPGMVLLKNYISPADQIKIIKTCEQLG-GEDGFYQPGYNDGAKLRLHMMCLGKDWDP 682
             +LRPGMV LK  IS  DQ KI+K C  LG G  GFYQPGY +G KL L MMCLGK+WDP
Sbjct: 278  IVLRPGMVHLKGGISVRDQAKIVKKCRDLGIGAGGFYQPGYREGGKLHLKMMCLGKNWDP 337

Query: 683  EQRSYGDIRS-DGFKPPIIPAELKGIVSDAILASHAKM-RDLGEKNPHEAVPCMEPDICI 856
            +  +YGDIR  D  KPP +P E   +V  AI  S+A M  D   KNP   +P M+PDICI
Sbjct: 338  DSSTYGDIRPFDDTKPPNLPDEFYQLVEKAIKDSYAIMAEDSTIKNPERVLPWMKPDICI 397

Query: 857  VNFYTNSGKLGLHQDRDESTESIEKGLPVVSFSIGDSAEFLYGDDRDPEQAKKVELNSGD 1036
            VNFY+ +G+LGLHQDRDES ES++KGLPV+SFSIGDSAEFL+GD  D +QA+KV L SGD
Sbjct: 398  VNFYSQNGRLGLHQDRDESQESLDKGLPVISFSIGDSAEFLFGDRSDVDQAEKVTLESGD 457

Query: 1037 VVIFGGKSRLIFHGVPSIIPDSAPKVLAEKANLRPGRLNLTFRKF 1171
            ++IFGGKSR +FHGV +I  ++APK L E  NLRPGRLNLTFR++
Sbjct: 458  ILIFGGKSRHVFHGVTAIHSNTAPKALLEATNLRPGRLNLTFRQY 502


>ref|XP_002466212.1| hypothetical protein SORBIDRAFT_01g003600 [Sorghum bicolor]
            gi|241920066|gb|EER93210.1| hypothetical protein
            SORBIDRAFT_01g003600 [Sorghum bicolor]
          Length = 381

 Score =  296 bits (759), Expect = 6e-78
 Identities = 158/292 (54%), Positives = 199/292 (68%), Gaps = 4/292 (1%)
 Frame = +2

Query: 308  MSPKRKMSPKREDGQHSPEHTDTKTIPPFHICVKPHGPPV-LKPSLFVSNRQKRGEIERS 484
            ++P +   P       S   +D+   P   IC+      V LKPS+  +NR+KR +  R 
Sbjct: 93   VTPVQPQKPVDSRSSQSSTGSDSGAAP-LDICMSASTCAVKLKPSILETNREKRRD--RE 149

Query: 485  INNDPRKTILRPGMVLLKNYISPADQIKIIKTCEQLG-GEDGFYQPGYNDGAKLRLHMMC 661
             + D     LRPGMVLLK +I P DQ+KI+K C QLG G  GFY+PGY +GA LRL MMC
Sbjct: 150  CSKDVAPLQLRPGMVLLKRFIKPNDQVKIVKLCRQLGVGPGGFYRPGYRNGAMLRLWMMC 209

Query: 662  LGKDWDPEQRSYGDIRS-DGFKPPIIPAELKGIVSDAILASHAKMRDL-GEKNPHEAVPC 835
            LGK+WDP   SYGD R  DG +PP IP E K  V D I AS+  ++   G  N  + +P 
Sbjct: 210  LGKNWDPNSYSYGDRRPFDGAQPPTIPEEFKKFVQDVIQASNEFLKQQKGAANAVQEIPA 269

Query: 836  MEPDICIVNFYTNSGKLGLHQDRDESTESIEKGLPVVSFSIGDSAEFLYGDDRDPEQAKK 1015
            M PDIC+VNFY +SG+LGLHQD+DES  S++KGLPVVSFSIG++AEFLYGD RD E+  K
Sbjct: 270  MSPDICLVNFYNSSGRLGLHQDKDESKSSLDKGLPVVSFSIGETAEFLYGDVRDQEKLSK 329

Query: 1016 VELNSGDVVIFGGKSRLIFHGVPSIIPDSAPKVLAEKANLRPGRLNLTFRKF 1171
            V+L SGDV+IFGG+SRLIFHGV +  P +APK L ++ NLRPGRLNLTFR++
Sbjct: 330  VDLESGDVLIFGGQSRLIFHGVSTTKPKTAPKWLMDETNLRPGRLNLTFRQY 381


>ref|NP_001051693.1| Os03g0816500 [Oryza sativa Japonica Group] gi|28875999|gb|AAO60008.1|
            unknown protein [Oryza sativa Japonica Group]
            gi|113550164|dbj|BAF13607.1| Os03g0816500 [Oryza sativa
            Japonica Group]
          Length = 513

 Score =  286 bits (732), Expect = 8e-75
 Identities = 160/304 (52%), Positives = 195/304 (64%), Gaps = 18/304 (5%)
 Frame = +2

Query: 311  SPKRKMSPKREDGQHSPEHTDTKTIP-------------PFHICVKPHGPPVLK--PSLF 445
            SP+  ++P R      P     +TIP             PF IC+K      +K   SL 
Sbjct: 214  SPQHMVTPVRLQESPGP-----RTIPCSSGSVGSGSGAAPFDICIKRDDKCSIKLSRSLL 268

Query: 446  VSNRQKRGEIERSINNDPRKTILRPGMVLLKNYISPADQIKIIKTCEQLG-GEDGFYQPG 622
              NR+KR E E+          LRPGMVLLK ++   DQ+ II+ C++LG G  GFY PG
Sbjct: 269  EINREKRREREQLSKEAAPLQYLRPGMVLLKKFLKHDDQVDIIRRCQKLGIGSGGFYTPG 328

Query: 623  YNDGAKLRLHMMCLGKDWDPEQRSYGDIRS-DGFKPPIIPAELKGIVSDAILASHAKMRD 799
            Y DG KL L MMCLGK+WDP  RSYGD R  DG +PP IP     IV DAI AS+  +R 
Sbjct: 329  YRDGGKLSLQMMCLGKNWDPNSRSYGDTRPFDGAQPPSIPEVFSKIVKDAIQASNEFLRQ 388

Query: 800  LGEK-NPHEAVPCMEPDICIVNFYTNSGKLGLHQDRDESTESIEKGLPVVSFSIGDSAEF 976
                 N  E +P + PDIC+VNFYT+SGKLGLHQD+DE+  S+ KGLPVVSFS+GD+AEF
Sbjct: 389  KARPANDVEELPPLSPDICLVNFYTSSGKLGLHQDKDETKPSLHKGLPVVSFSLGDTAEF 448

Query: 977  LYGDDRDPEQAKKVELNSGDVVIFGGKSRLIFHGVPSIIPDSAPKVLAEKANLRPGRLNL 1156
            LYGD  D ++A KV+L SGDV+IFGGKSRLIFHGV  I P +AP  L ++A LRPGRLNL
Sbjct: 449  LYGDVNDVDKASKVDLESGDVLIFGGKSRLIFHGVSRIKPKTAPNWLTDEAKLRPGRLNL 508

Query: 1157 TFRK 1168
            TFR+
Sbjct: 509  TFRQ 512


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