BLASTX nr result

ID: Coptis25_contig00014349 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00014349
         (995 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265135.1| PREDICTED: probable F-actin-capping protein ...   284   e-112
emb|CAN65826.1| hypothetical protein VITISV_027402 [Vitis vinifera]   282   e-111
ref|XP_003556177.1| PREDICTED: LOW QUALITY PROTEIN: probable F-a...   275   e-110
gb|AFK48478.1| unknown [Lotus japonicus]                              275   e-109
gb|AFK38122.1| unknown [Medicago truncatula]                          273   e-109

>ref|XP_002265135.1| PREDICTED: probable F-actin-capping protein subunit beta [Vitis
           vinifera] gi|297739352|emb|CBI29342.3| unnamed protein
           product [Vitis vinifera]
          Length = 256

 Score =  284 bits (726), Expect(2) = e-112
 Identities = 132/152 (86%), Positives = 146/152 (96%)
 Frame = +1

Query: 412 RYYEGGISSVYMWEDENEGFVACFLIKKDGSKSGQGRRGYLEEGSWDAIHVIQVGPEEEG 591
           +YYEGGISSVYMWEDENEGFV CFLIKKDGSK+G GRRGYL+EGSWDAIHVI+VGP+EEG
Sbjct: 105 QYYEGGISSVYMWEDENEGFVGCFLIKKDGSKTGHGRRGYLQEGSWDAIHVIEVGPDEEG 164

Query: 592 IAHYCLTSTVMLSLTTHDESSGTFSLSGSIRRQMNMDLAVVEGHLCNMGRMIEEMESKLR 771
           I HYCLTSTVMLSLTT+D+SSGTFSLSGSIRRQMNMDL++ +GHLCNMG+MIEEMESKLR
Sbjct: 165 ITHYCLTSTVMLSLTTNDQSSGTFSLSGSIRRQMNMDLSIADGHLCNMGKMIEEMESKLR 224

Query: 772 NSLDQVYFGKTREMVCTLRPPAEVAQLRLPDS 867
           NSLDQVYFGKT+EMVCTLRPPAEV  +RLP+S
Sbjct: 225 NSLDQVYFGKTKEMVCTLRPPAEVLPMRLPES 256



 Score =  148 bits (373), Expect(2) = e-112
 Identities = 72/105 (68%), Positives = 77/105 (73%)
 Frame = +2

Query: 95  MEAAMGLMRRIHPKHTETXXXXXXXXXXXXXXXXXXXXXXXXQVLCDMDIGKEFILCEYN 274
           MEAA+GLMRRIHPKH+ET                        QVLCD+D GKEFILCEYN
Sbjct: 1   MEAALGLMRRIHPKHSETALSALLGLLPHLSSDLLSQVDQPLQVLCDVDSGKEFILCEYN 60

Query: 275 RDADSYRSPWSNKYHPPLEDGQLPSPELRKLEIEANDVFAIYRDQ 409
           RDADSYRSPWSNKYHPPLEDG  PS ELRKLEIEAN+VF+IYRDQ
Sbjct: 61  RDADSYRSPWSNKYHPPLEDGPYPSSELRKLEIEANEVFSIYRDQ 105


>emb|CAN65826.1| hypothetical protein VITISV_027402 [Vitis vinifera]
          Length = 256

 Score =  282 bits (722), Expect(2) = e-111
 Identities = 132/152 (86%), Positives = 145/152 (95%)
 Frame = +1

Query: 412 RYYEGGISSVYMWEDENEGFVACFLIKKDGSKSGQGRRGYLEEGSWDAIHVIQVGPEEEG 591
           +YYEGGISSVYMWEDENEGFV CFLIKKDGSK+G GRRGYL+EGSWDAIHVI+VGP+EEG
Sbjct: 105 QYYEGGISSVYMWEDENEGFVXCFLIKKDGSKTGHGRRGYLQEGSWDAIHVIEVGPDEEG 164

Query: 592 IAHYCLTSTVMLSLTTHDESSGTFSLSGSIRRQMNMDLAVVEGHLCNMGRMIEEMESKLR 771
           I HYCLTSTVMLSLTT+D+SSGTFSLSGSIRRQMNMDL++ +GHLCNMG+MIEEMESKLR
Sbjct: 165 ITHYCLTSTVMLSLTTNDQSSGTFSLSGSIRRQMNMDLSIADGHLCNMGKMIEEMESKLR 224

Query: 772 NSLDQVYFGKTREMVCTLRPPAEVAQLRLPDS 867
           NSLDQVYFGKT+EMVCTLRPPAEV  +RLP S
Sbjct: 225 NSLDQVYFGKTKEMVCTLRPPAEVLPMRLPXS 256



 Score =  148 bits (373), Expect(2) = e-111
 Identities = 72/105 (68%), Positives = 77/105 (73%)
 Frame = +2

Query: 95  MEAAMGLMRRIHPKHTETXXXXXXXXXXXXXXXXXXXXXXXXQVLCDMDIGKEFILCEYN 274
           MEAA+GLMRRIHPKH+ET                        QVLCD+D GKEFILCEYN
Sbjct: 1   MEAALGLMRRIHPKHSETALSALLGLLPHLSSDLLSQVDQPLQVLCDVDSGKEFILCEYN 60

Query: 275 RDADSYRSPWSNKYHPPLEDGQLPSPELRKLEIEANDVFAIYRDQ 409
           RDADSYRSPWSNKYHPPLEDG  PS ELRKLEIEAN+VF+IYRDQ
Sbjct: 61  RDADSYRSPWSNKYHPPLEDGPYPSSELRKLEIEANEVFSIYRDQ 105


>ref|XP_003556177.1| PREDICTED: LOW QUALITY PROTEIN: probable F-actin-capping protein
           subunit beta-like [Glycine max]
          Length = 257

 Score =  275 bits (703), Expect(2) = e-110
 Identities = 132/152 (86%), Positives = 146/152 (96%)
 Frame = +1

Query: 412 RYYEGGISSVYMWEDENEGFVACFLIKKDGSKSGQGRRGYLEEGSWDAIHVIQVGPEEEG 591
           +YYEGGISSVYMWED+NEGFVACFLIKKDGSK+GQGRRGYLEEG+WDAIHVI+VGPEEE 
Sbjct: 105 QYYEGGISSVYMWEDDNEGFVACFLIKKDGSKTGQGRRGYLEEGAWDAIHVIEVGPEEEE 164

Query: 592 IAHYCLTSTVMLSLTTHDESSGTFSLSGSIRRQMNMDLAVVEGHLCNMGRMIEEMESKLR 771
             +Y LTSTVML+LTT++ESSGTFSLSGSIRRQM+M L+V +GHLCNMGRMIEEMESKLR
Sbjct: 165 NTNYRLTSTVMLTLTTNNESSGTFSLSGSIRRQMSMKLSVADGHLCNMGRMIEEMESKLR 224

Query: 772 NSLDQVYFGKTREMVCTLRPPAEVAQLRLPDS 867
           NSLDQVYFGKTREMVCTLRPP+EVAQLR+PDS
Sbjct: 225 NSLDQVYFGKTREMVCTLRPPSEVAQLRMPDS 256



 Score =  150 bits (379), Expect(2) = e-110
 Identities = 74/105 (70%), Positives = 77/105 (73%)
 Frame = +2

Query: 95  MEAAMGLMRRIHPKHTETXXXXXXXXXXXXXXXXXXXXXXXXQVLCDMDIGKEFILCEYN 274
           MEAAMGLMRRI PKHTET                        QVLCD++ GKEFILCEYN
Sbjct: 1   MEAAMGLMRRIPPKHTETALSALLSLMPDNSSDLLSQVDQPLQVLCDVECGKEFILCEYN 60

Query: 275 RDADSYRSPWSNKYHPPLEDGQLPSPELRKLEIEANDVFAIYRDQ 409
           RDADSYRSPWSNKYHPPLEDG LPS ELRKLEIEAND+FAIYRDQ
Sbjct: 61  RDADSYRSPWSNKYHPPLEDGSLPSSELRKLEIEANDIFAIYRDQ 105


>gb|AFK48478.1| unknown [Lotus japonicus]
          Length = 256

 Score =  275 bits (703), Expect(2) = e-109
 Identities = 132/152 (86%), Positives = 145/152 (95%)
 Frame = +1

Query: 412 RYYEGGISSVYMWEDENEGFVACFLIKKDGSKSGQGRRGYLEEGSWDAIHVIQVGPEEEG 591
           +YYEGGISSVYMWED+NEGFVACFLIKKDGSK+GQGRRGYLEEG+WDAIHVI+VGPEEE 
Sbjct: 105 QYYEGGISSVYMWEDDNEGFVACFLIKKDGSKTGQGRRGYLEEGAWDAIHVIEVGPEEEE 164

Query: 592 IAHYCLTSTVMLSLTTHDESSGTFSLSGSIRRQMNMDLAVVEGHLCNMGRMIEEMESKLR 771
             +Y LTSTVML+LTT +ESSGTFSLSGSIRRQMNM L+V +GHLCNMGRMIEEMESKLR
Sbjct: 165 NTNYRLTSTVMLTLTTSNESSGTFSLSGSIRRQMNMKLSVADGHLCNMGRMIEEMESKLR 224

Query: 772 NSLDQVYFGKTREMVCTLRPPAEVAQLRLPDS 867
           NSLDQVYFGKTREMVCTLRPPAEVAQ+R+P+S
Sbjct: 225 NSLDQVYFGKTREMVCTLRPPAEVAQMRIPES 256



 Score =  148 bits (374), Expect(2) = e-109
 Identities = 73/105 (69%), Positives = 77/105 (73%)
 Frame = +2

Query: 95  MEAAMGLMRRIHPKHTETXXXXXXXXXXXXXXXXXXXXXXXXQVLCDMDIGKEFILCEYN 274
           MEAAMGLMRRI PKHT+T                        QVLCD+D GKEFILCEYN
Sbjct: 1   MEAAMGLMRRIPPKHTDTALSALLSLMPNHSSDLLSQVDQPLQVLCDVDSGKEFILCEYN 60

Query: 275 RDADSYRSPWSNKYHPPLEDGQLPSPELRKLEIEANDVFAIYRDQ 409
           RDADSYRSPWSNKYHPPLEDG LPS ELRKLEIEA+D+FAIYRDQ
Sbjct: 61  RDADSYRSPWSNKYHPPLEDGSLPSAELRKLEIEASDIFAIYRDQ 105


>gb|AFK38122.1| unknown [Medicago truncatula]
          Length = 256

 Score =  273 bits (699), Expect(2) = e-109
 Identities = 131/152 (86%), Positives = 146/152 (96%)
 Frame = +1

Query: 412 RYYEGGISSVYMWEDENEGFVACFLIKKDGSKSGQGRRGYLEEGSWDAIHVIQVGPEEEG 591
           +YYEGGISSVYMWEDENEGFVACFLIKKDGSK+GQGRRGYLEEG+WDAIHVI+VGPEEE 
Sbjct: 105 QYYEGGISSVYMWEDENEGFVACFLIKKDGSKTGQGRRGYLEEGAWDAIHVIEVGPEEEE 164

Query: 592 IAHYCLTSTVMLSLTTHDESSGTFSLSGSIRRQMNMDLAVVEGHLCNMGRMIEEMESKLR 771
             +Y LTSTVML+LTT++ESSGTFSLSGSIRRQM+M L+V +GHLCNMGRMIEEMESKLR
Sbjct: 165 DTNYRLTSTVMLTLTTNNESSGTFSLSGSIRRQMSMRLSVADGHLCNMGRMIEEMESKLR 224

Query: 772 NSLDQVYFGKTREMVCTLRPPAEVAQLRLPDS 867
           NSLDQVYFGKTREMVCTLRPP+EVAQ+R+P+S
Sbjct: 225 NSLDQVYFGKTREMVCTLRPPSEVAQMRMPES 256



 Score =  150 bits (378), Expect(2) = e-109
 Identities = 74/105 (70%), Positives = 76/105 (72%)
 Frame = +2

Query: 95  MEAAMGLMRRIHPKHTETXXXXXXXXXXXXXXXXXXXXXXXXQVLCDMDIGKEFILCEYN 274
           MEAAMGLMRRI PKHTET                        QVLCD+D GKEFILCEYN
Sbjct: 1   MEAAMGLMRRIPPKHTETALSALLSLMPNHSSDLLSQVDQPLQVLCDVDCGKEFILCEYN 60

Query: 275 RDADSYRSPWSNKYHPPLEDGQLPSPELRKLEIEANDVFAIYRDQ 409
           RDADSYR PWSNKYHPPLEDG LPS ELRKLEIEAND+FAIYRDQ
Sbjct: 61  RDADSYRPPWSNKYHPPLEDGSLPSSELRKLEIEANDIFAIYRDQ 105


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