BLASTX nr result

ID: Coptis25_contig00014345 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00014345
         (278 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADL36786.1| MYBR domain class transcription factor [Malus x d...   119   3e-25
gb|ADG56764.1| putative MYB transcription factor [Rosa rugosa]        118   4e-25
gb|AFK46031.1| unknown [Medicago truncatula]                          117   1e-24
ref|XP_004137958.1| PREDICTED: transcription factor ASG4-like [C...   115   3e-24
ref|XP_002525193.1| DNA binding protein, putative [Ricinus commu...   115   4e-24

>gb|ADL36786.1| MYBR domain class transcription factor [Malus x domestica]
          Length = 350

 Score =  119 bits (298), Expect = 3e-25
 Identities = 57/73 (78%), Positives = 61/73 (83%)
 Frame = -1

Query: 221 TMASAAFETCSSDVSSRSKKIRKPYTITKSRESWTDEEHDKFLEALHLFDRDWKKIEDFI 42
           T +SAA    S     +SKKIRKPYTITKSRESWTD+EHDKFLEAL LFDRDWKKIE F+
Sbjct: 52  TASSAAANAASMSADDQSKKIRKPYTITKSRESWTDQEHDKFLEALQLFDRDWKKIESFV 111

Query: 41  GSKTVIQIRSHAQ 3
           GSKTVIQIRSHAQ
Sbjct: 112 GSKTVIQIRSHAQ 124


>gb|ADG56764.1| putative MYB transcription factor [Rosa rugosa]
          Length = 324

 Score =  118 bits (296), Expect = 4e-25
 Identities = 59/78 (75%), Positives = 63/78 (80%)
 Frame = -1

Query: 236 FA*LSTMASAAFETCSSDVSSRSKKIRKPYTITKSRESWTDEEHDKFLEALHLFDRDWKK 57
           FA ++T A+    T SS     SKKIRKPYTITKSRESWT+ EHDKFLEAL LFDRDWKK
Sbjct: 27  FASVATAATTTASTTSSSAEDLSKKIRKPYTITKSRESWTEPEHDKFLEALQLFDRDWKK 86

Query: 56  IEDFIGSKTVIQIRSHAQ 3
           IE FIGSKTVIQIRSHAQ
Sbjct: 87  IEAFIGSKTVIQIRSHAQ 104


>gb|AFK46031.1| unknown [Medicago truncatula]
          Length = 206

 Score =  117 bits (292), Expect = 1e-24
 Identities = 55/74 (74%), Positives = 63/74 (85%)
 Frame = -1

Query: 224 STMASAAFETCSSDVSSRSKKIRKPYTITKSRESWTDEEHDKFLEALHLFDRDWKKIEDF 45
           ++MA+    T +S   +  KK+RKPYTITKSRESW+DEEHDKFLEAL LFDRDWKKIEDF
Sbjct: 6   NSMAAPTTTTTTSGGDASGKKVRKPYTITKSRESWSDEEHDKFLEALQLFDRDWKKIEDF 65

Query: 44  IGSKTVIQIRSHAQ 3
           +GSKTVIQIRSHAQ
Sbjct: 66  VGSKTVIQIRSHAQ 79


>ref|XP_004137958.1| PREDICTED: transcription factor ASG4-like [Cucumis sativus]
           gi|449519124|ref|XP_004166585.1| PREDICTED:
           transcription factor ASG4-like [Cucumis sativus]
          Length = 288

 Score =  115 bits (289), Expect = 3e-24
 Identities = 54/65 (83%), Positives = 58/65 (89%)
 Frame = -1

Query: 197 TCSSDVSSRSKKIRKPYTITKSRESWTDEEHDKFLEALHLFDRDWKKIEDFIGSKTVIQI 18
           T S+   S  KK+RKPYTITKSRESWT+EEHDKFLEAL LFDRDWKKIEDF+GSKTVIQI
Sbjct: 13  TSSTAADSSGKKVRKPYTITKSRESWTEEEHDKFLEALQLFDRDWKKIEDFVGSKTVIQI 72

Query: 17  RSHAQ 3
           RSHAQ
Sbjct: 73  RSHAQ 77


>ref|XP_002525193.1| DNA binding protein, putative [Ricinus communis]
           gi|223535490|gb|EEF37159.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 317

 Score =  115 bits (288), Expect = 4e-24
 Identities = 55/74 (74%), Positives = 63/74 (85%)
 Frame = -1

Query: 224 STMASAAFETCSSDVSSRSKKIRKPYTITKSRESWTDEEHDKFLEALHLFDRDWKKIEDF 45
           +T ++AA    ++ V    KK+RKPYTITKSRESWT+EEHDKFLEAL LFDRDWKKIEDF
Sbjct: 45  TTTSTAAPPINTAAVDGSGKKVRKPYTITKSRESWTEEEHDKFLEALQLFDRDWKKIEDF 104

Query: 44  IGSKTVIQIRSHAQ 3
           +GSKTVIQIRSHAQ
Sbjct: 105 VGSKTVIQIRSHAQ 118


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