BLASTX nr result

ID: Coptis25_contig00014334 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00014334
         (2942 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631305.1| PREDICTED: LOW QUALITY PROTEIN: transcriptio...   555   e-155
emb|CBI27416.3| unnamed protein product [Vitis vinifera]              525   e-146
ref|XP_002314910.1| predicted protein [Populus trichocarpa] gi|2...   523   e-146
ref|XP_002514566.1| conserved hypothetical protein [Ricinus comm...   491   e-136
ref|XP_003520142.1| PREDICTED: transcription factor bHLH49-like ...   438   e-120

>ref|XP_003631305.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor bHLH49-like
            [Vitis vinifera]
          Length = 609

 Score =  555 bits (1431), Expect = e-155
 Identities = 321/582 (55%), Positives = 383/582 (65%), Gaps = 53/582 (9%)
 Frame = -2

Query: 2134 MDSGDKDKF----------------VSPDWRFNDPAG-IASQPLGLVPTENSVAISKGDL 2006
            MD  DKDKF                +S DWRF    G + +  +  V   N +A+ KGDL
Sbjct: 34   MDMSDKDKFELEKRSGDSLNYHSASMSSDWRFGGGGGNLTNTSMSTVQGGNPMAVCKGDL 93

Query: 2005 M------SSSMVDSFCPTLWDHP-NSHSLGFMENNVHQTSTSTSNTAVLRKGVPVTSRSD 1847
            +      S+SMVDSF P LWDHP NS +LGF + NV Q + STS+T  +RKG P + R D
Sbjct: 94   VGSSSCSSASMVDSFGPNLWDHPANSQTLGFCDMNV-QNNASTSSTLGIRKGGPGSLRMD 152

Query: 1846 MENALDMGWNSPNLMLREGAFLQSNARNLPPSLSQFPADSGFIERAARFSCFNGGNFGDI 1667
            ++  LD+GWN P+ ML+ G FL +    LP  LSQFPADSGFIERAARFSCFNGGNF D+
Sbjct: 153  IDKTLDIGWNPPSSMLKGGIFLPNAPGMLPQGLSQFPADSGFIERAARFSCFNGGNFSDM 212

Query: 1666 VNPFNLSEPMNPYSKG----PQDVLSANGMNPLLGAESQKSELNMAEIAKDHSMSVEHGA 1499
            +NPF++ E +NPYS+G     QDV ++NG+  + G +SQK E +MAEI+KD S +V  GA
Sbjct: 213  MNPFSIPESLNPYSRGGGMLQQDVFASNGLKSVPGGQSQKDEPSMAEISKDVSSAVR-GA 271

Query: 1498 AGTSPVKNDIEKRGYGRPSDEARQG---TNPXXXXXXXXXXXXXXXXXXXXXENAGGEPS 1328
               SP+KN+ +     +  +EA+QG   +                       E  GGEPS
Sbjct: 272  MEGSPLKNERKSESLVKSLEEAKQGIGVSGNESDEAEFSGGGGGGQEEPSILEGTGGEPS 331

Query: 1327 SVXXXXXXXXXXXGQNAETDQDKGASQHSGEPAK--------GDDK-----SKTATKPGK 1187
            S            GQ+ E DQ KG+ Q  GE +K        GD       SK   K GK
Sbjct: 332  SGKGLGSKKRKRSGQDPEIDQVKGSPQQPGEASKDNPEIQHKGDQNPSSVPSKNTGKHGK 391

Query: 1186 DGSQASDAPKEDYIHIRARRGQATNSHSLAERVRREKISERMKFLQELVPGCSKVTGKAV 1007
             G+QASD PKE+YIH+RARRGQATNSHSLAERVRREKISERMKFLQ+LVPGCSKVTGKAV
Sbjct: 392  QGAQASDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAV 451

Query: 1006 MLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEGILAKD--------ILQSRVGP-ST 854
            MLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEG+L KD        ILQSRVGP ST
Sbjct: 452  MLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEGMLGKDVSEIAXQKILQSRVGPSST 511

Query: 853  LGFSPDMNMVHPQLHPSQQSLIQGGISGLVNSSDALRRTINSQLAALNSGYKDFMPQNHQ 674
            +GFSP+  M +PQLHPSQ  LIQ G+ GL NSSDA+RRTINSQLAA++ GYK+  P    
Sbjct: 512  MGFSPETTMPYPQLHPSQPGLIQVGLPGLGNSSDAIRRTINSQLAAMSGGYKESAP---- 567

Query: 673  QIPSGWDDELHNVVQMSYGANGPFNNQDLNGSLPPGHMKVEL 548
            Q+P+ W+DELHNVVQM +    P N+QDLNGSLPPGHMK EL
Sbjct: 568  QLPNVWEDELHNVVQMGFSTGAPLNSQDLNGSLPPGHMKAEL 609


>emb|CBI27416.3| unnamed protein product [Vitis vinifera]
          Length = 496

 Score =  525 bits (1351), Expect = e-146
 Identities = 300/557 (53%), Positives = 356/557 (63%), Gaps = 28/557 (5%)
 Frame = -2

Query: 2134 MDSGDKDKF----------------VSPDWRFNDPAGIASQPLGLVPTENSVAISKGDLM 2003
            MD  DKDKF                +S DWRF                     + KGDL+
Sbjct: 1    MDMSDKDKFELEKRSGDSLNYHSASMSSDWRFG-------------------GVCKGDLV 41

Query: 2002 ------SSSMVDSFCPTLWDHP-NSHSLGFMENNVHQTSTSTSNTAVLRKGVPVTSRSDM 1844
                  S+SMVDSF P LWDHP NS +LGF + NV Q + STS+T  +RKG P + R D+
Sbjct: 42   GSSSCSSASMVDSFGPNLWDHPANSQTLGFCDMNV-QNNASTSSTLGIRKGGPGSLRMDI 100

Query: 1843 ENALDMGWNSPNLMLREGAFLQSNARNLPPSLSQFPADSGFIERAARFSCFNGGNFGDIV 1664
            +  LD+GWN P+ ML+ G FL +    LP  LSQFPADSGFIERAARFSCFNGGNF D++
Sbjct: 101  DKTLDIGWNPPSSMLKGGIFLPNAPGMLPQGLSQFPADSGFIERAARFSCFNGGNFSDMM 160

Query: 1663 NPFNLSEPMNPYSKG----PQDVLSANGMNPLLGAESQKSELNMAEIAKDHSMSVEHGAA 1496
            NPF++ E +NPYS+G     QDV ++NG+  + G +SQK E +MAEI+KD S + ++   
Sbjct: 161  NPFSIPESLNPYSRGGGMLQQDVFASNGLKSVPGGQSQKDEPSMAEISKDVSSAKQNKEL 220

Query: 1495 GTSPVKNDIEKRGYGRPSDEARQGTNPXXXXXXXXXXXXXXXXXXXXXENAGGEPSSVXX 1316
            G     +    +G G    + R G +P                         G P     
Sbjct: 221  GCGEPSSG---KGLGSKKRK-RSGQDPEID-------------------QVKGSPQ---- 253

Query: 1315 XXXXXXXXXGQNAETDQDKGASQHSGEPAKGDDKSKTATKPGKDGSQASDAPKEDYIHIR 1136
                      Q  E  +D    QH G+       SK   K GK G+QASD PKE+YIH+R
Sbjct: 254  ----------QPGEASKDNPEIQHKGDQNPSSVPSKNTGKHGKQGAQASDPPKEEYIHVR 303

Query: 1135 ARRGQATNSHSLAERVRREKISERMKFLQELVPGCSKVTGKAVMLDEIINYVQSLQRQVE 956
            ARRGQATNSHSLAERVRREKISERMKFLQ+LVPGCSKVTGKAVMLDEIINYVQSLQRQVE
Sbjct: 304  ARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVE 363

Query: 955  FLSMKLATVNPRLDFNIEGILAKDILQSRVGP-STLGFSPDMNMVHPQLHPSQQSLIQGG 779
            FLSMKLATVNPRLDFNIEG+L KDILQSRVGP ST+GFSP+  M +PQLHPSQ  LIQ G
Sbjct: 364  FLSMKLATVNPRLDFNIEGMLGKDILQSRVGPSSTMGFSPETTMPYPQLHPSQPGLIQVG 423

Query: 778  ISGLVNSSDALRRTINSQLAALNSGYKDFMPQNHQQIPSGWDDELHNVVQMSYGANGPFN 599
            + GL NSSDA+RRTINSQLAA++ GYK+  P    Q+P+ W+DELHNVVQM +    P N
Sbjct: 424  LPGLGNSSDAIRRTINSQLAAMSGGYKESAP----QLPNVWEDELHNVVQMGFSTGAPLN 479

Query: 598  NQDLNGSLPPGHMKVEL 548
            +QDLNGSLPPGHMK EL
Sbjct: 480  SQDLNGSLPPGHMKAEL 496


>ref|XP_002314910.1| predicted protein [Populus trichocarpa] gi|222863950|gb|EEF01081.1|
            predicted protein [Populus trichocarpa]
          Length = 562

 Score =  523 bits (1348), Expect = e-146
 Identities = 297/569 (52%), Positives = 368/569 (64%), Gaps = 40/569 (7%)
 Frame = -2

Query: 2134 MDSGDKDKF-----------------VSPDWRFNDPAGIASQPLGLVPTENSVAISKGDL 2006
            MD  DKDKF                 +S DWRFN  + I +  LGLVP +N +++ +GDL
Sbjct: 1    MDMSDKDKFELGKSNDNPINYHSPGGLSSDWRFNSTS-IPNSSLGLVPIDNQMSVCRGDL 59

Query: 2005 M------SSSMVDSFCPTLWDHP-NSHSLGFMENNVHQTSTSTSNTAVLRKGVPVTSRSD 1847
            +      S+S++DSF P +W+HP NS +L F + NV Q   S+SNT  + KG P + R+ 
Sbjct: 60   VGAASCSSASVIDSFGPAMWEHPTNSQNLVFCDINV-QNIASSSNTVGIGKGAPASLRNG 118

Query: 1846 MENALDMGWNSPNLMLREGAFLQSNARNLPPSLSQFPADSGFIERAARFSCFNGGNFGDI 1667
            ++  L+MGWN PN ML+ G FL +    LP SLSQFPADS FIERAARFSCFNGG+FGD+
Sbjct: 119  IDRTLEMGWNPPNSMLKGGNFLPNAPGMLPQSLSQFPADSAFIERAARFSCFNGGDFGDM 178

Query: 1666 VNPFNLSEPMNPYSKG------PQDVLSANGMNPLLGAESQKSELNMAEIAKDHSMSVEH 1505
            VNPF + E M  +S+G      P +V   +GM  + G ++QK+ +N  E +KD SMSV+H
Sbjct: 179  VNPFGVPESMGLFSRGGGMMQGPGEVFVGSGMKSVSGGQAQKNVMNAGEASKDVSMSVDH 238

Query: 1504 GAAGTSPVKNDIEKRGYGRPSDEARQGTNPXXXXXXXXXXXXXXXXXXXXXENAGGEPSS 1325
             A   SP+KN+ ++    R  DEA++G                                S
Sbjct: 239  MATEGSPLKNETKRESLARSRDEAKKGVGGSGNDSDEAEFSGGSGQDEPSLLEGNCGELS 298

Query: 1324 VXXXXXXXXXXXGQNAETDQDKGASQHS-GEPA---KGDDK-----SKTATKPGKDGSQA 1172
                        G++AE DQ KG  Q + G P    KGD K     SK + K GK GSQ 
Sbjct: 299  AKSLGSKKRKRSGEDAELDQAKGTPQSAKGSPETQQKGDQKPTSTTSKASGKQGKQGSQG 358

Query: 1171 SDAPKEDYIHIRARRGQATNSHSLAERVRREKISERMKFLQELVPGCSKVTGKAVMLDEI 992
            SD PKE+YIH+RARRGQATNSHSLAERVRREKISERMKFLQ+LVPGCSKVTGKAVMLDEI
Sbjct: 359  SDQPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEI 418

Query: 991  INYVQSLQRQVEFLSMKLATVNPRLDFNIEGILAKDILQSR-VGPSTLGFSPDMNMVHPQ 815
            INYVQSLQRQVEFLSMKLATVNPRLDFNIEG+LAKDILQSR V PS+L FS +M M +P 
Sbjct: 419  INYVQSLQRQVEFLSMKLATVNPRLDFNIEGLLAKDILQSRAVPPSSLAFSSEMPMAYPA 478

Query: 814  LHPSQQSLIQGGISGLVNSSDALRRTINSQLAALNSGYKDFMPQNHQQIPSGWDDELHNV 635
            LH SQ  LI     G+ + SD +RRTINSQL A+ +G+K+       Q+P+ WDDELHNV
Sbjct: 479  LHQSQPGLIPTAFPGMESHSDIIRRTINSQLTAMTAGFKE-----PAQLPNVWDDELHNV 533

Query: 634  VQMSYGANGPFNNQDLNGSLPPGHMKVEL 548
            VQM+YG + P ++QD+N  LPPGH+KVEL
Sbjct: 534  VQMTYGTSAPQDSQDVNEPLPPGHLKVEL 562


>ref|XP_002514566.1| conserved hypothetical protein [Ricinus communis]
            gi|223546170|gb|EEF47672.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 566

 Score =  491 bits (1265), Expect = e-136
 Identities = 288/548 (52%), Positives = 346/548 (63%), Gaps = 28/548 (5%)
 Frame = -2

Query: 2107 VSPDWRFNDPAGIASQPLGLVPTENSVAISKGDLM------SSSMVDSFCPTLWDHP-NS 1949
            ++ DWRF   + I +  LGLVPT+N + + +GDL+      ++SMVDSF P LWDH  NS
Sbjct: 27   MTSDWRFGS-SNITNTSLGLVPTDNQMPVCRGDLLGASSCSTASMVDSFGPGLWDHSTNS 85

Query: 1948 HSLGFMENNVHQTSTSTSNTAVLRKGVPVTSRSDMENALDMGWNSPNLMLREGAFLQSNA 1769
             +LGF + NV Q   STSNT   RK  P + R   + AL MGWN P+ ML+ G FL S  
Sbjct: 86   LNLGFCDINV-QNHPSTSNTIGHRKSGPTSLRVGTDKALQMGWNPPSSMLKGGIFLPSAP 144

Query: 1768 RNLPPSLSQFPADSGFIERAARFSCFNGGNFGDIVNPFNLSEPMNPYSK------GPQDV 1607
              LP SLSQFPADS FIERAARFSCFNGGNF D++NPF + E M  YS+      GPQ+V
Sbjct: 145  GVLPQSLSQFPADSAFIERAARFSCFNGGNFSDMMNPFGIPESMGLYSRSGGMMQGPQEV 204

Query: 1606 LSANGMNPLLGAESQKSELNMAEIAKDHSMSVEHGAAGTSPVKNDIEKRGYGRPSDEARQ 1427
             +A+G+  + G + Q +   + E +KD SMS+EH A    P+KN+ +     R +DEA+Q
Sbjct: 205  FAASGLKTVTGGQGQNNVTIVGETSKDASMSIEHVAI-EGPLKNERKSDSLVRSNDEAKQ 263

Query: 1426 GTNPXXXXXXXXXXXXXXXXXXXXXENAGGEPSSVXXXXXXXXXXXGQNAETDQDKG--- 1256
            G                            G   S            GQ+ E DQ KG   
Sbjct: 264  GAGGSGDESEEAEFSGGGGQEEASTLEGNGMELSAKSLGLKKRKRNGQDIELDQAKGNLQ 323

Query: 1255 ---------ASQHSGEPAKGDDKSKTATKPGKDGSQASDAPKEDYIHIRARRGQATNSHS 1103
                      +Q  G+       +KT+ K GK GSQASD PKE+YIH+RARRGQATNSHS
Sbjct: 324  SVEAAKDNVEAQQKGDQTPTSTPNKTSGKQGKQGSQASDPPKEEYIHVRARRGQATNSHS 383

Query: 1102 LAERVRREKISERMKFLQELVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNP 923
            LAERVRREKISERMKFLQ+LVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNP
Sbjct: 384  LAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNP 443

Query: 922  RLDFNIEGILAKDILQSRVGP-STLGFSPDMNMVHPQLHPSQQSLIQGGISGLVNSSDAL 746
            RLDFNIEG+LAKDIL SR  P STL FSPDM M +P  + SQ  LIQ    G+ + SD L
Sbjct: 444  RLDFNIEGLLAKDILHSRAVPSSTLAFSPDMIMAYPPFNTSQPGLIQASFPGMESHSDVL 503

Query: 745  RRTINSQLAALNSGYKDFMPQNHQQIPSGWDDELHNVVQMSYGANGPFNNQDLN-GSLP- 572
            RRTI+SQL  L+  +K+       Q+P+ WDDELHNVVQM YG     ++QD+N GSLP 
Sbjct: 504  RRTISSQLTPLSGVFKE-----PTQLPNAWDDELHNVVQMGYGTGTTQDSQDVNAGSLPA 558

Query: 571  PGHMKVEL 548
             G MK EL
Sbjct: 559  AGQMKAEL 566


>ref|XP_003520142.1| PREDICTED: transcription factor bHLH49-like [Glycine max]
          Length = 551

 Score =  438 bits (1127), Expect = e-120
 Identities = 274/571 (47%), Positives = 344/571 (60%), Gaps = 28/571 (4%)
 Frame = -2

Query: 2176 RDRYPSSRSCSVVGMDSGDKDKFVSPDWRFNDPAGIASQPLGLVPT-ENSVAISKGDLM- 2003
            ++++   R+   V   SG     +  DWRF   + +A+  +G V    NS+ +S+GDL+ 
Sbjct: 4    KEKFEVDRNEDHVSYSSG-----MHSDWRFGG-SNLANSSVGFVGLGNNSMNVSRGDLIG 57

Query: 2002 -----SSSMVDSFCPTLWDHP-NSHSLGFME-NNVHQTSTSTSNTAVLRKGVPVTS-RSD 1847
                 S+SMVDS  P  W++P +S  LGF + NNVH    S+S  A+ + G        D
Sbjct: 58   SSSCSSASMVDSLSPNYWENPTSSQKLGFCDINNVHNNGGSSSTVAIRKDGFGFGRVGQD 117

Query: 1846 MENALDMGWNSPNLMLREGAFLQSNARNLPPSLSQFPADSGFIERAARFSCFNGGNFGDI 1667
                L+MGWN  N ML  G  +       P SLSQFP DSGFIERAARFSCF+GGNFGD+
Sbjct: 118  HHGTLEMGWNHANSMLPNGPVM------FPHSLSQFPTDSGFIERAARFSCFSGGNFGDM 171

Query: 1666 VNPFNLSEPMNPYSKGPQDVLSANGMNPLL-GAESQKSELNMAEIAKDHSMSVEH-GAAG 1493
            VN + +++ M  Y  G +D ++ +G+  ++ G +SQ  ++N+ E   D   SVEH  AA 
Sbjct: 172  VNSYGIAQSMGLY--GARDAIAGHGLKSVIAGGQSQGGDMNVVE---DVPPSVEHLVAAK 226

Query: 1492 TSPVKNDIEKRGYGRPSDEARQGT--NPXXXXXXXXXXXXXXXXXXXXXENAGGEPSSVX 1319
             SP+K+D    G+    DE +Q    N                      E   GEPSS  
Sbjct: 227  GSPLKSDRRSEGHVIFQDEGKQSLVRNANESDRAESSDDGGGQDDSPMLEGTSGEPSS-K 285

Query: 1318 XXXXXXXXXXGQNAETDQDKGASQHSGEPAKGDDKS-------------KTATKPGKDGS 1178
                      G++ + D+  GA +   E AKG+ ++             K   K  K GS
Sbjct: 286  GLNSKKRKRSGRDGDNDKANGAQELPSEGAKGNSENQQKGDQQPISTANKACGKNAKLGS 345

Query: 1177 QASDAPKEDYIHIRARRGQATNSHSLAERVRREKISERMKFLQELVPGCSKVTGKAVMLD 998
            QASD PKE+YIH+RARRGQATNSHSLAERVRREKISERMKFLQ+LVPGCSKVTGKAVMLD
Sbjct: 346  QASDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLD 405

Query: 997  EIINYVQSLQRQVEFLSMKLATVNPRLDFNIEGILAKDILQSRVGPST-LGFSPDMNMVH 821
            EIINYVQSLQRQVEFLSMKLATVNPRLDFNIEG+LAKDILQ R  PST LGF  DM+M  
Sbjct: 406  EIINYVQSLQRQVEFLSMKLATVNPRLDFNIEGLLAKDILQQRPDPSTALGFPLDMSMAF 465

Query: 820  PQLHPSQQSLIQGGISGLVNSSDALRRTINSQLAALNSGYKDFMPQNHQQIPSGWDDELH 641
            P LHP Q  LI   I  + NSSD L+RTI+ QLA LN G+K+       Q+P  W+DELH
Sbjct: 466  PPLHPPQPGLIHPVIPNMTNSSDILQRTIHPQLAPLNGGFKE-----PNQLPDVWEDELH 520

Query: 640  NVVQMSYGANGPFNNQDLNGSLPPGHMKVEL 548
            NVVQMS+    P  +QD++G+ P   MKVEL
Sbjct: 521  NVVQMSFATTAPPTSQDVDGTGPASQMKVEL 551


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