BLASTX nr result
ID: Coptis25_contig00014334
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00014334
(2942 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003631305.1| PREDICTED: LOW QUALITY PROTEIN: transcriptio... 555 e-155
emb|CBI27416.3| unnamed protein product [Vitis vinifera] 525 e-146
ref|XP_002314910.1| predicted protein [Populus trichocarpa] gi|2... 523 e-146
ref|XP_002514566.1| conserved hypothetical protein [Ricinus comm... 491 e-136
ref|XP_003520142.1| PREDICTED: transcription factor bHLH49-like ... 438 e-120
>ref|XP_003631305.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor bHLH49-like
[Vitis vinifera]
Length = 609
Score = 555 bits (1431), Expect = e-155
Identities = 321/582 (55%), Positives = 383/582 (65%), Gaps = 53/582 (9%)
Frame = -2
Query: 2134 MDSGDKDKF----------------VSPDWRFNDPAG-IASQPLGLVPTENSVAISKGDL 2006
MD DKDKF +S DWRF G + + + V N +A+ KGDL
Sbjct: 34 MDMSDKDKFELEKRSGDSLNYHSASMSSDWRFGGGGGNLTNTSMSTVQGGNPMAVCKGDL 93
Query: 2005 M------SSSMVDSFCPTLWDHP-NSHSLGFMENNVHQTSTSTSNTAVLRKGVPVTSRSD 1847
+ S+SMVDSF P LWDHP NS +LGF + NV Q + STS+T +RKG P + R D
Sbjct: 94 VGSSSCSSASMVDSFGPNLWDHPANSQTLGFCDMNV-QNNASTSSTLGIRKGGPGSLRMD 152
Query: 1846 MENALDMGWNSPNLMLREGAFLQSNARNLPPSLSQFPADSGFIERAARFSCFNGGNFGDI 1667
++ LD+GWN P+ ML+ G FL + LP LSQFPADSGFIERAARFSCFNGGNF D+
Sbjct: 153 IDKTLDIGWNPPSSMLKGGIFLPNAPGMLPQGLSQFPADSGFIERAARFSCFNGGNFSDM 212
Query: 1666 VNPFNLSEPMNPYSKG----PQDVLSANGMNPLLGAESQKSELNMAEIAKDHSMSVEHGA 1499
+NPF++ E +NPYS+G QDV ++NG+ + G +SQK E +MAEI+KD S +V GA
Sbjct: 213 MNPFSIPESLNPYSRGGGMLQQDVFASNGLKSVPGGQSQKDEPSMAEISKDVSSAVR-GA 271
Query: 1498 AGTSPVKNDIEKRGYGRPSDEARQG---TNPXXXXXXXXXXXXXXXXXXXXXENAGGEPS 1328
SP+KN+ + + +EA+QG + E GGEPS
Sbjct: 272 MEGSPLKNERKSESLVKSLEEAKQGIGVSGNESDEAEFSGGGGGGQEEPSILEGTGGEPS 331
Query: 1327 SVXXXXXXXXXXXGQNAETDQDKGASQHSGEPAK--------GDDK-----SKTATKPGK 1187
S GQ+ E DQ KG+ Q GE +K GD SK K GK
Sbjct: 332 SGKGLGSKKRKRSGQDPEIDQVKGSPQQPGEASKDNPEIQHKGDQNPSSVPSKNTGKHGK 391
Query: 1186 DGSQASDAPKEDYIHIRARRGQATNSHSLAERVRREKISERMKFLQELVPGCSKVTGKAV 1007
G+QASD PKE+YIH+RARRGQATNSHSLAERVRREKISERMKFLQ+LVPGCSKVTGKAV
Sbjct: 392 QGAQASDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAV 451
Query: 1006 MLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEGILAKD--------ILQSRVGP-ST 854
MLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEG+L KD ILQSRVGP ST
Sbjct: 452 MLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEGMLGKDVSEIAXQKILQSRVGPSST 511
Query: 853 LGFSPDMNMVHPQLHPSQQSLIQGGISGLVNSSDALRRTINSQLAALNSGYKDFMPQNHQ 674
+GFSP+ M +PQLHPSQ LIQ G+ GL NSSDA+RRTINSQLAA++ GYK+ P
Sbjct: 512 MGFSPETTMPYPQLHPSQPGLIQVGLPGLGNSSDAIRRTINSQLAAMSGGYKESAP---- 567
Query: 673 QIPSGWDDELHNVVQMSYGANGPFNNQDLNGSLPPGHMKVEL 548
Q+P+ W+DELHNVVQM + P N+QDLNGSLPPGHMK EL
Sbjct: 568 QLPNVWEDELHNVVQMGFSTGAPLNSQDLNGSLPPGHMKAEL 609
>emb|CBI27416.3| unnamed protein product [Vitis vinifera]
Length = 496
Score = 525 bits (1351), Expect = e-146
Identities = 300/557 (53%), Positives = 356/557 (63%), Gaps = 28/557 (5%)
Frame = -2
Query: 2134 MDSGDKDKF----------------VSPDWRFNDPAGIASQPLGLVPTENSVAISKGDLM 2003
MD DKDKF +S DWRF + KGDL+
Sbjct: 1 MDMSDKDKFELEKRSGDSLNYHSASMSSDWRFG-------------------GVCKGDLV 41
Query: 2002 ------SSSMVDSFCPTLWDHP-NSHSLGFMENNVHQTSTSTSNTAVLRKGVPVTSRSDM 1844
S+SMVDSF P LWDHP NS +LGF + NV Q + STS+T +RKG P + R D+
Sbjct: 42 GSSSCSSASMVDSFGPNLWDHPANSQTLGFCDMNV-QNNASTSSTLGIRKGGPGSLRMDI 100
Query: 1843 ENALDMGWNSPNLMLREGAFLQSNARNLPPSLSQFPADSGFIERAARFSCFNGGNFGDIV 1664
+ LD+GWN P+ ML+ G FL + LP LSQFPADSGFIERAARFSCFNGGNF D++
Sbjct: 101 DKTLDIGWNPPSSMLKGGIFLPNAPGMLPQGLSQFPADSGFIERAARFSCFNGGNFSDMM 160
Query: 1663 NPFNLSEPMNPYSKG----PQDVLSANGMNPLLGAESQKSELNMAEIAKDHSMSVEHGAA 1496
NPF++ E +NPYS+G QDV ++NG+ + G +SQK E +MAEI+KD S + ++
Sbjct: 161 NPFSIPESLNPYSRGGGMLQQDVFASNGLKSVPGGQSQKDEPSMAEISKDVSSAKQNKEL 220
Query: 1495 GTSPVKNDIEKRGYGRPSDEARQGTNPXXXXXXXXXXXXXXXXXXXXXENAGGEPSSVXX 1316
G + +G G + R G +P G P
Sbjct: 221 GCGEPSSG---KGLGSKKRK-RSGQDPEID-------------------QVKGSPQ---- 253
Query: 1315 XXXXXXXXXGQNAETDQDKGASQHSGEPAKGDDKSKTATKPGKDGSQASDAPKEDYIHIR 1136
Q E +D QH G+ SK K GK G+QASD PKE+YIH+R
Sbjct: 254 ----------QPGEASKDNPEIQHKGDQNPSSVPSKNTGKHGKQGAQASDPPKEEYIHVR 303
Query: 1135 ARRGQATNSHSLAERVRREKISERMKFLQELVPGCSKVTGKAVMLDEIINYVQSLQRQVE 956
ARRGQATNSHSLAERVRREKISERMKFLQ+LVPGCSKVTGKAVMLDEIINYVQSLQRQVE
Sbjct: 304 ARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVE 363
Query: 955 FLSMKLATVNPRLDFNIEGILAKDILQSRVGP-STLGFSPDMNMVHPQLHPSQQSLIQGG 779
FLSMKLATVNPRLDFNIEG+L KDILQSRVGP ST+GFSP+ M +PQLHPSQ LIQ G
Sbjct: 364 FLSMKLATVNPRLDFNIEGMLGKDILQSRVGPSSTMGFSPETTMPYPQLHPSQPGLIQVG 423
Query: 778 ISGLVNSSDALRRTINSQLAALNSGYKDFMPQNHQQIPSGWDDELHNVVQMSYGANGPFN 599
+ GL NSSDA+RRTINSQLAA++ GYK+ P Q+P+ W+DELHNVVQM + P N
Sbjct: 424 LPGLGNSSDAIRRTINSQLAAMSGGYKESAP----QLPNVWEDELHNVVQMGFSTGAPLN 479
Query: 598 NQDLNGSLPPGHMKVEL 548
+QDLNGSLPPGHMK EL
Sbjct: 480 SQDLNGSLPPGHMKAEL 496
>ref|XP_002314910.1| predicted protein [Populus trichocarpa] gi|222863950|gb|EEF01081.1|
predicted protein [Populus trichocarpa]
Length = 562
Score = 523 bits (1348), Expect = e-146
Identities = 297/569 (52%), Positives = 368/569 (64%), Gaps = 40/569 (7%)
Frame = -2
Query: 2134 MDSGDKDKF-----------------VSPDWRFNDPAGIASQPLGLVPTENSVAISKGDL 2006
MD DKDKF +S DWRFN + I + LGLVP +N +++ +GDL
Sbjct: 1 MDMSDKDKFELGKSNDNPINYHSPGGLSSDWRFNSTS-IPNSSLGLVPIDNQMSVCRGDL 59
Query: 2005 M------SSSMVDSFCPTLWDHP-NSHSLGFMENNVHQTSTSTSNTAVLRKGVPVTSRSD 1847
+ S+S++DSF P +W+HP NS +L F + NV Q S+SNT + KG P + R+
Sbjct: 60 VGAASCSSASVIDSFGPAMWEHPTNSQNLVFCDINV-QNIASSSNTVGIGKGAPASLRNG 118
Query: 1846 MENALDMGWNSPNLMLREGAFLQSNARNLPPSLSQFPADSGFIERAARFSCFNGGNFGDI 1667
++ L+MGWN PN ML+ G FL + LP SLSQFPADS FIERAARFSCFNGG+FGD+
Sbjct: 119 IDRTLEMGWNPPNSMLKGGNFLPNAPGMLPQSLSQFPADSAFIERAARFSCFNGGDFGDM 178
Query: 1666 VNPFNLSEPMNPYSKG------PQDVLSANGMNPLLGAESQKSELNMAEIAKDHSMSVEH 1505
VNPF + E M +S+G P +V +GM + G ++QK+ +N E +KD SMSV+H
Sbjct: 179 VNPFGVPESMGLFSRGGGMMQGPGEVFVGSGMKSVSGGQAQKNVMNAGEASKDVSMSVDH 238
Query: 1504 GAAGTSPVKNDIEKRGYGRPSDEARQGTNPXXXXXXXXXXXXXXXXXXXXXENAGGEPSS 1325
A SP+KN+ ++ R DEA++G S
Sbjct: 239 MATEGSPLKNETKRESLARSRDEAKKGVGGSGNDSDEAEFSGGSGQDEPSLLEGNCGELS 298
Query: 1324 VXXXXXXXXXXXGQNAETDQDKGASQHS-GEPA---KGDDK-----SKTATKPGKDGSQA 1172
G++AE DQ KG Q + G P KGD K SK + K GK GSQ
Sbjct: 299 AKSLGSKKRKRSGEDAELDQAKGTPQSAKGSPETQQKGDQKPTSTTSKASGKQGKQGSQG 358
Query: 1171 SDAPKEDYIHIRARRGQATNSHSLAERVRREKISERMKFLQELVPGCSKVTGKAVMLDEI 992
SD PKE+YIH+RARRGQATNSHSLAERVRREKISERMKFLQ+LVPGCSKVTGKAVMLDEI
Sbjct: 359 SDQPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEI 418
Query: 991 INYVQSLQRQVEFLSMKLATVNPRLDFNIEGILAKDILQSR-VGPSTLGFSPDMNMVHPQ 815
INYVQSLQRQVEFLSMKLATVNPRLDFNIEG+LAKDILQSR V PS+L FS +M M +P
Sbjct: 419 INYVQSLQRQVEFLSMKLATVNPRLDFNIEGLLAKDILQSRAVPPSSLAFSSEMPMAYPA 478
Query: 814 LHPSQQSLIQGGISGLVNSSDALRRTINSQLAALNSGYKDFMPQNHQQIPSGWDDELHNV 635
LH SQ LI G+ + SD +RRTINSQL A+ +G+K+ Q+P+ WDDELHNV
Sbjct: 479 LHQSQPGLIPTAFPGMESHSDIIRRTINSQLTAMTAGFKE-----PAQLPNVWDDELHNV 533
Query: 634 VQMSYGANGPFNNQDLNGSLPPGHMKVEL 548
VQM+YG + P ++QD+N LPPGH+KVEL
Sbjct: 534 VQMTYGTSAPQDSQDVNEPLPPGHLKVEL 562
>ref|XP_002514566.1| conserved hypothetical protein [Ricinus communis]
gi|223546170|gb|EEF47672.1| conserved hypothetical
protein [Ricinus communis]
Length = 566
Score = 491 bits (1265), Expect = e-136
Identities = 288/548 (52%), Positives = 346/548 (63%), Gaps = 28/548 (5%)
Frame = -2
Query: 2107 VSPDWRFNDPAGIASQPLGLVPTENSVAISKGDLM------SSSMVDSFCPTLWDHP-NS 1949
++ DWRF + I + LGLVPT+N + + +GDL+ ++SMVDSF P LWDH NS
Sbjct: 27 MTSDWRFGS-SNITNTSLGLVPTDNQMPVCRGDLLGASSCSTASMVDSFGPGLWDHSTNS 85
Query: 1948 HSLGFMENNVHQTSTSTSNTAVLRKGVPVTSRSDMENALDMGWNSPNLMLREGAFLQSNA 1769
+LGF + NV Q STSNT RK P + R + AL MGWN P+ ML+ G FL S
Sbjct: 86 LNLGFCDINV-QNHPSTSNTIGHRKSGPTSLRVGTDKALQMGWNPPSSMLKGGIFLPSAP 144
Query: 1768 RNLPPSLSQFPADSGFIERAARFSCFNGGNFGDIVNPFNLSEPMNPYSK------GPQDV 1607
LP SLSQFPADS FIERAARFSCFNGGNF D++NPF + E M YS+ GPQ+V
Sbjct: 145 GVLPQSLSQFPADSAFIERAARFSCFNGGNFSDMMNPFGIPESMGLYSRSGGMMQGPQEV 204
Query: 1606 LSANGMNPLLGAESQKSELNMAEIAKDHSMSVEHGAAGTSPVKNDIEKRGYGRPSDEARQ 1427
+A+G+ + G + Q + + E +KD SMS+EH A P+KN+ + R +DEA+Q
Sbjct: 205 FAASGLKTVTGGQGQNNVTIVGETSKDASMSIEHVAI-EGPLKNERKSDSLVRSNDEAKQ 263
Query: 1426 GTNPXXXXXXXXXXXXXXXXXXXXXENAGGEPSSVXXXXXXXXXXXGQNAETDQDKG--- 1256
G G S GQ+ E DQ KG
Sbjct: 264 GAGGSGDESEEAEFSGGGGQEEASTLEGNGMELSAKSLGLKKRKRNGQDIELDQAKGNLQ 323
Query: 1255 ---------ASQHSGEPAKGDDKSKTATKPGKDGSQASDAPKEDYIHIRARRGQATNSHS 1103
+Q G+ +KT+ K GK GSQASD PKE+YIH+RARRGQATNSHS
Sbjct: 324 SVEAAKDNVEAQQKGDQTPTSTPNKTSGKQGKQGSQASDPPKEEYIHVRARRGQATNSHS 383
Query: 1102 LAERVRREKISERMKFLQELVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNP 923
LAERVRREKISERMKFLQ+LVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNP
Sbjct: 384 LAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNP 443
Query: 922 RLDFNIEGILAKDILQSRVGP-STLGFSPDMNMVHPQLHPSQQSLIQGGISGLVNSSDAL 746
RLDFNIEG+LAKDIL SR P STL FSPDM M +P + SQ LIQ G+ + SD L
Sbjct: 444 RLDFNIEGLLAKDILHSRAVPSSTLAFSPDMIMAYPPFNTSQPGLIQASFPGMESHSDVL 503
Query: 745 RRTINSQLAALNSGYKDFMPQNHQQIPSGWDDELHNVVQMSYGANGPFNNQDLN-GSLP- 572
RRTI+SQL L+ +K+ Q+P+ WDDELHNVVQM YG ++QD+N GSLP
Sbjct: 504 RRTISSQLTPLSGVFKE-----PTQLPNAWDDELHNVVQMGYGTGTTQDSQDVNAGSLPA 558
Query: 571 PGHMKVEL 548
G MK EL
Sbjct: 559 AGQMKAEL 566
>ref|XP_003520142.1| PREDICTED: transcription factor bHLH49-like [Glycine max]
Length = 551
Score = 438 bits (1127), Expect = e-120
Identities = 274/571 (47%), Positives = 344/571 (60%), Gaps = 28/571 (4%)
Frame = -2
Query: 2176 RDRYPSSRSCSVVGMDSGDKDKFVSPDWRFNDPAGIASQPLGLVPT-ENSVAISKGDLM- 2003
++++ R+ V SG + DWRF + +A+ +G V NS+ +S+GDL+
Sbjct: 4 KEKFEVDRNEDHVSYSSG-----MHSDWRFGG-SNLANSSVGFVGLGNNSMNVSRGDLIG 57
Query: 2002 -----SSSMVDSFCPTLWDHP-NSHSLGFME-NNVHQTSTSTSNTAVLRKGVPVTS-RSD 1847
S+SMVDS P W++P +S LGF + NNVH S+S A+ + G D
Sbjct: 58 SSSCSSASMVDSLSPNYWENPTSSQKLGFCDINNVHNNGGSSSTVAIRKDGFGFGRVGQD 117
Query: 1846 MENALDMGWNSPNLMLREGAFLQSNARNLPPSLSQFPADSGFIERAARFSCFNGGNFGDI 1667
L+MGWN N ML G + P SLSQFP DSGFIERAARFSCF+GGNFGD+
Sbjct: 118 HHGTLEMGWNHANSMLPNGPVM------FPHSLSQFPTDSGFIERAARFSCFSGGNFGDM 171
Query: 1666 VNPFNLSEPMNPYSKGPQDVLSANGMNPLL-GAESQKSELNMAEIAKDHSMSVEH-GAAG 1493
VN + +++ M Y G +D ++ +G+ ++ G +SQ ++N+ E D SVEH AA
Sbjct: 172 VNSYGIAQSMGLY--GARDAIAGHGLKSVIAGGQSQGGDMNVVE---DVPPSVEHLVAAK 226
Query: 1492 TSPVKNDIEKRGYGRPSDEARQGT--NPXXXXXXXXXXXXXXXXXXXXXENAGGEPSSVX 1319
SP+K+D G+ DE +Q N E GEPSS
Sbjct: 227 GSPLKSDRRSEGHVIFQDEGKQSLVRNANESDRAESSDDGGGQDDSPMLEGTSGEPSS-K 285
Query: 1318 XXXXXXXXXXGQNAETDQDKGASQHSGEPAKGDDKS-------------KTATKPGKDGS 1178
G++ + D+ GA + E AKG+ ++ K K K GS
Sbjct: 286 GLNSKKRKRSGRDGDNDKANGAQELPSEGAKGNSENQQKGDQQPISTANKACGKNAKLGS 345
Query: 1177 QASDAPKEDYIHIRARRGQATNSHSLAERVRREKISERMKFLQELVPGCSKVTGKAVMLD 998
QASD PKE+YIH+RARRGQATNSHSLAERVRREKISERMKFLQ+LVPGCSKVTGKAVMLD
Sbjct: 346 QASDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLD 405
Query: 997 EIINYVQSLQRQVEFLSMKLATVNPRLDFNIEGILAKDILQSRVGPST-LGFSPDMNMVH 821
EIINYVQSLQRQVEFLSMKLATVNPRLDFNIEG+LAKDILQ R PST LGF DM+M
Sbjct: 406 EIINYVQSLQRQVEFLSMKLATVNPRLDFNIEGLLAKDILQQRPDPSTALGFPLDMSMAF 465
Query: 820 PQLHPSQQSLIQGGISGLVNSSDALRRTINSQLAALNSGYKDFMPQNHQQIPSGWDDELH 641
P LHP Q LI I + NSSD L+RTI+ QLA LN G+K+ Q+P W+DELH
Sbjct: 466 PPLHPPQPGLIHPVIPNMTNSSDILQRTIHPQLAPLNGGFKE-----PNQLPDVWEDELH 520
Query: 640 NVVQMSYGANGPFNNQDLNGSLPPGHMKVEL 548
NVVQMS+ P +QD++G+ P MKVEL
Sbjct: 521 NVVQMSFATTAPPTSQDVDGTGPASQMKVEL 551