BLASTX nr result
ID: Coptis25_contig00014318
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00014318 (890 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002518826.1| conserved hypothetical protein [Ricinus comm... 71 7e-19 ref|XP_003634816.1| PREDICTED: protein strawberry notch-like [Vi... 69 3e-18 ref|XP_003571536.1| PREDICTED: protein strawberry notch-like [Br... 64 2e-15 dbj|BAD02983.1| putative sno protein [Oryza sativa Japonica Group] 63 3e-15 ref|XP_004154610.1| PREDICTED: succinate-semialdehyde dehydrogen... 71 3e-10 >ref|XP_002518826.1| conserved hypothetical protein [Ricinus communis] gi|223541999|gb|EEF43544.1| conserved hypothetical protein [Ricinus communis] Length = 1281 Score = 71.2 bits (173), Expect(2) = 7e-19 Identities = 32/41 (78%), Positives = 34/41 (82%) Frame = -1 Query: 791 EARVIYCSATGTSEPRNLGYMV*VGLWRAGMCFIDFHDFLG 669 EARVIYCSATG SEPRN+GYMV +GLW AG CF DF FLG Sbjct: 415 EARVIYCSATGASEPRNMGYMVRLGLWGAGTCFSDFQKFLG 455 Score = 49.3 bits (116), Expect(2) = 7e-19 Identities = 23/32 (71%), Positives = 27/32 (84%) Frame = -2 Query: 889 REGVIFLTYNSLITSSEKGCARLQQLLHWRNS 794 REGV+FLTY+SLI SSEKG +RLQQL+ W S Sbjct: 343 REGVVFLTYSSLIASSEKGRSRLQQLVQWCGS 374 >ref|XP_003634816.1| PREDICTED: protein strawberry notch-like [Vitis vinifera] Length = 1242 Score = 68.9 bits (167), Expect(2) = 3e-18 Identities = 29/41 (70%), Positives = 35/41 (85%) Frame = -1 Query: 791 EARVIYCSATGTSEPRNLGYMV*VGLWRAGMCFIDFHDFLG 669 +ARVIYCSATG SEPRN+GYM+ +GLW AG CF +F +FLG Sbjct: 372 DARVIYCSATGASEPRNMGYMIRLGLWGAGTCFSNFREFLG 412 Score = 49.3 bits (116), Expect(2) = 3e-18 Identities = 23/32 (71%), Positives = 27/32 (84%) Frame = -2 Query: 889 REGVIFLTYNSLITSSEKGCARLQQLLHWRNS 794 REGV+FLTY+SLI SSEKG +RLQQL+ W S Sbjct: 300 REGVVFLTYSSLIASSEKGRSRLQQLVQWCGS 331 >ref|XP_003571536.1| PREDICTED: protein strawberry notch-like [Brachypodium distachyon] Length = 1311 Score = 63.9 bits (154), Expect(2) = 2e-15 Identities = 29/42 (69%), Positives = 33/42 (78%) Frame = -1 Query: 794 TEARVIYCSATGTSEPRNLGYMV*VGLWRAGMCFIDFHDFLG 669 +EARV+YCSATG SEPRNLGYMV +GLW G F +F FLG Sbjct: 441 SEARVVYCSATGASEPRNLGYMVRLGLWGDGTSFQNFQQFLG 482 Score = 44.7 bits (104), Expect(2) = 2e-15 Identities = 20/30 (66%), Positives = 25/30 (83%) Frame = -2 Query: 883 GVIFLTYNSLITSSEKGCARLQQLLHWRNS 794 GV+F+TY+SLI SSEKG +RLQQL+ W S Sbjct: 372 GVVFVTYSSLIASSEKGYSRLQQLVQWCGS 401 >dbj|BAD02983.1| putative sno protein [Oryza sativa Japonica Group] Length = 1398 Score = 63.2 bits (152), Expect(2) = 3e-15 Identities = 29/41 (70%), Positives = 32/41 (78%) Frame = -1 Query: 791 EARVIYCSATGTSEPRNLGYMV*VGLWRAGMCFIDFHDFLG 669 EARV+YCSATG SEPRNLGYMV +GLW G F +F FLG Sbjct: 444 EARVVYCSATGASEPRNLGYMVRLGLWGDGTSFQNFQKFLG 484 Score = 45.1 bits (105), Expect(2) = 3e-15 Identities = 21/30 (70%), Positives = 25/30 (83%) Frame = -2 Query: 883 GVIFLTYNSLITSSEKGCARLQQLLHWRNS 794 GVIF+TY+SLI SSEKG +RLQQL+ W S Sbjct: 374 GVIFVTYSSLIASSEKGRSRLQQLIEWCGS 403 >ref|XP_004154610.1| PREDICTED: succinate-semialdehyde dehydrogenase, mitochondrial-like [Cucumis sativus] Length = 432 Score = 71.2 bits (173), Expect = 3e-10 Identities = 31/49 (63%), Positives = 37/49 (75%) Frame = -1 Query: 791 EARVIYCSATGTSEPRNLGYMV*VGLWRAGMCFIDFHDFLGLELIASYF 645 EAR+IYCSATG SEPRN+GYMV +GLW G FIDF DFLG+ ++ Sbjct: 357 EARIIYCSATGASEPRNMGYMVRLGLWGTGTSFIDFRDFLGVVSAGKFY 405