BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00014302
         (416 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK48034.1| unknown [Lotus japonicus]                               80   2e-13
gb|AFK42721.1| unknown [Lotus japonicus]                               79   4e-13
ref|XP_002532149.1| Ribulose bisphosphate carboxylase small chai...    78   8e-13
gb|ADB85091.1| ribulose 1,5-bisphosphate carboxylase small subun...    76   2e-12
gb|ABJ74187.1| chloroplast ribulose-1,5-bisphosphate carboxylase...    76   2e-12

>gb|AFK48034.1| unknown [Lotus japonicus]
          Length = 181

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 36/46 (78%), Positives = 41/46 (89%)
 Frame = +2

Query: 2   TDAVQVVNELDEAIKAYPNGFIRIIGFDNVRQVQVITFIAHRPPGY 139
           +DA QV+ ELDEA+KAYPN F+RIIGFDNVRQVQ I+FIAHRP GY
Sbjct: 136 SDATQVLKELDEAVKAYPNAFVRIIGFDNVRQVQCISFIAHRPAGY 181


>gb|AFK42721.1| unknown [Lotus japonicus]
          Length = 182

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 35/46 (76%), Positives = 41/46 (89%)
 Frame = +2

Query: 2   TDAVQVVNELDEAIKAYPNGFIRIIGFDNVRQVQVITFIAHRPPGY 139
           +DA QV+ ELDEA++AYPN F+RIIGFDNVRQVQ I+FIAHRP GY
Sbjct: 137 SDAAQVLKELDEAVRAYPNAFVRIIGFDNVRQVQCISFIAHRPAGY 182


>ref|XP_002532149.1| Ribulose bisphosphate carboxylase small chain, chloroplast
           precursor, putative [Ricinus communis]
           gi|223528159|gb|EEF30223.1| Ribulose bisphosphate
           carboxylase small chain, chloroplast precursor, putative
           [Ricinus communis]
          Length = 185

 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 35/46 (76%), Positives = 42/46 (91%)
 Frame = +2

Query: 2   TDAVQVVNELDEAIKAYPNGFIRIIGFDNVRQVQVITFIAHRPPGY 139
           +DAVQV+ ELDEAIKAYPN F+RIIGFDNVRQVQ I+FIA++PP +
Sbjct: 137 SDAVQVLKELDEAIKAYPNSFVRIIGFDNVRQVQCISFIAYKPPSF 182


>gb|ADB85091.1| ribulose 1,5-bisphosphate carboxylase small subunit [Jatropha
           curcas]
          Length = 181

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 35/45 (77%), Positives = 42/45 (93%)
 Frame = +2

Query: 2   TDAVQVVNELDEAIKAYPNGFIRIIGFDNVRQVQVITFIAHRPPG 136
           TDAVQV+NELDEAIKA+PNGF+RIIGFD+ RQVQ I+FIA++P G
Sbjct: 136 TDAVQVLNELDEAIKAHPNGFVRIIGFDSYRQVQCISFIAYKPKG 180


>gb|ABJ74187.1| chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase small
           subunit [Artemisia annua]
          Length = 90

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 35/46 (76%), Positives = 39/46 (84%)
 Frame = +2

Query: 2   TDAVQVVNELDEAIKAYPNGFIRIIGFDNVRQVQVITFIAHRPPGY 139
           TD+ QV+ EL EA K YPN FIRIIGFDNVRQVQ I+FIAH+PPGY
Sbjct: 45  TDSAQVMKELQEAKKEYPNAFIRIIGFDNVRQVQCISFIAHKPPGY 90