BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00014281
         (1153 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI38027.3| unnamed protein product [Vitis vinifera]              219   8e-55
ref|XP_002274081.1| PREDICTED: uncharacterized protein LOC100257...   219   8e-55
ref|XP_002313773.1| predicted protein [Populus trichocarpa] gi|2...   219   1e-54
ref|XP_004148553.1| PREDICTED: RNA-binding protein 28-like [Cucu...   211   4e-52
ref|NP_565513.1| RNA recognition motif-containing protein [Arabi...   207   3e-51

>emb|CBI38027.3| unnamed protein product [Vitis vinifera]
          Length = 918

 Score =  219 bits (559), Expect = 8e-55
 Identities = 110/192 (57%), Positives = 134/192 (69%), Gaps = 3/192 (1%)
 Frame = +3

Query: 450  LAQDGCRMEALAVLYESVRAARASVGVLHQQKVKGGLVWARQLGGEGSKTQKWKLIVRNL 629
            L+QDGC+++A AVLY SV+ A ASV +LHQ+++KGG+VWARQLGGEGSKTQKWKLIVRNL
Sbjct: 211  LSQDGCKIDASAVLYSSVKEAHASVAMLHQKEIKGGIVWARQLGGEGSKTQKWKLIVRNL 270

Query: 630  PFKATVNEISVLFSSAGFVWDVFIPNNLETGLSKGFGFVKFTCKKDAETAIQKVNGQTFG 809
            PFKA V EI  +FSSAGFVWD FIP N ETGLS+GF FVKFT K+DAE AIQK NG+  G
Sbjct: 271  PFKAKVTEIKDIFSSAGFVWDAFIPQNSETGLSRGFAFVKFTSKQDAENAIQKFNGEKIG 330

Query: 810  RRPIAVDWAVPKKLFTAGADTVDVTKGIEC---DAXXXXXXXXXXXXXXXXXXTSPPLHA 980
            +RPIAVDWAVPKK++  GA+ V  ++  +    D                     P    
Sbjct: 331  KRPIAVDWAVPKKIYITGANPVVASEDGQLNGRDGEGDTDSDDLEDDTTDIDNKVPHPQG 390

Query: 981  EGGVPEDANATD 1016
             G  P+D+N T+
Sbjct: 391  VGSAPDDSNTTE 402



 Score = 70.9 bits (172), Expect(2) = 6e-23
 Identities = 32/50 (64%), Positives = 38/50 (76%)
 Frame = +3

Query: 12  MGIRKESEQEQEGVPHSPSTIFVSNLPYSYTNSQLEETFGDVGPVRRCFM 161
           MG + ++E       H PST+FVSN PYS+TNSQLEETF DVGP+RRCFM
Sbjct: 1   MGKKNKTEGGGARDQHCPSTVFVSNFPYSFTNSQLEETFSDVGPIRRCFM 50



 Score = 63.9 bits (154), Expect(2) = 6e-23
 Identities = 32/51 (62%), Positives = 38/51 (74%)
 Frame = +2

Query: 161 GHSKGAAAEDADRAVELKNGALISGRKIRVKHAMHRPPNEQRKAKSNQDSI 313
           G  + A  EDA+RA+ELKNG+ I GRKI VK AMHR P EQR++K NQD I
Sbjct: 63  GFVQFAVKEDANRAIELKNGSSIGGRKIGVKLAMHRTPLEQRRSKENQDDI 113


>ref|XP_002274081.1| PREDICTED: uncharacterized protein LOC100257200 [Vitis vinifera]
          Length = 972

 Score =  219 bits (559), Expect = 8e-55
 Identities = 110/192 (57%), Positives = 134/192 (69%), Gaps = 3/192 (1%)
 Frame = +3

Query: 450  LAQDGCRMEALAVLYESVRAARASVGVLHQQKVKGGLVWARQLGGEGSKTQKWKLIVRNL 629
            L+QDGC+++A AVLY SV+ A ASV +LHQ+++KGG+VWARQLGGEGSKTQKWKLIVRNL
Sbjct: 230  LSQDGCKIDASAVLYSSVKEAHASVAMLHQKEIKGGIVWARQLGGEGSKTQKWKLIVRNL 289

Query: 630  PFKATVNEISVLFSSAGFVWDVFIPNNLETGLSKGFGFVKFTCKKDAETAIQKVNGQTFG 809
            PFKA V EI  +FSSAGFVWD FIP N ETGLS+GF FVKFT K+DAE AIQK NG+  G
Sbjct: 290  PFKAKVTEIKDIFSSAGFVWDAFIPQNSETGLSRGFAFVKFTSKQDAENAIQKFNGEKIG 349

Query: 810  RRPIAVDWAVPKKLFTAGADTVDVTKGIEC---DAXXXXXXXXXXXXXXXXXXTSPPLHA 980
            +RPIAVDWAVPKK++  GA+ V  ++  +    D                     P    
Sbjct: 350  KRPIAVDWAVPKKIYITGANPVVASEDGQLNGRDGEGDTDSDDLEDDTTDIDNKVPHPQG 409

Query: 981  EGGVPEDANATD 1016
             G  P+D+N T+
Sbjct: 410  VGSAPDDSNTTE 421



 Score = 70.9 bits (172), Expect(2) = 5e-22
 Identities = 32/50 (64%), Positives = 38/50 (76%)
 Frame = +3

Query: 12  MGIRKESEQEQEGVPHSPSTIFVSNLPYSYTNSQLEETFGDVGPVRRCFM 161
           MG + ++E       H PST+FVSN PYS+TNSQLEETF DVGP+RRCFM
Sbjct: 1   MGKKNKTEGGGARDQHCPSTVFVSNFPYSFTNSQLEETFSDVGPIRRCFM 50



 Score = 60.8 bits (146), Expect(2) = 5e-22
 Identities = 34/58 (58%), Positives = 40/58 (68%), Gaps = 5/58 (8%)
 Frame = +2

Query: 161 GHSKGAAAEDADRAVELKNGALISGRKIRVKHAMHRPPNEQRKAKSNQ-----DSIKT 319
           G  + A  EDA+RA+ELKNG+ I GRKI VK AMHR P EQR++K NQ     D IKT
Sbjct: 63  GFVQFAVKEDANRAIELKNGSSIGGRKIGVKLAMHRTPLEQRRSKENQAVHSDDIIKT 120


>ref|XP_002313773.1| predicted protein [Populus trichocarpa] gi|222850181|gb|EEE87728.1|
           predicted protein [Populus trichocarpa]
          Length = 974

 Score =  219 bits (557), Expect = 1e-54
 Identities = 102/140 (72%), Positives = 121/140 (86%)
 Frame = +3

Query: 450 LAQDGCRMEALAVLYESVRAARASVGVLHQQKVKGGLVWARQLGGEGSKTQKWKLIVRNL 629
           L QDGCR  A AVL+ SV+ AR+SV +LHQ+++KGG+VWARQLGGEG KTQKWKLI+RNL
Sbjct: 228 LEQDGCRSGASAVLFTSVKEARSSVAMLHQKEIKGGIVWARQLGGEGCKTQKWKLIIRNL 287

Query: 630 PFKATVNEISVLFSSAGFVWDVFIPNNLETGLSKGFGFVKFTCKKDAETAIQKVNGQTFG 809
           PFKA  NEI  +F SAG VWDVF+P+N ETGLSKGF FVKFTCK+DAE AIQK NGQ FG
Sbjct: 288 PFKAKPNEIKGVFESAGCVWDVFVPHNSETGLSKGFAFVKFTCKQDAENAIQKFNGQKFG 347

Query: 810 RRPIAVDWAVPKKLFTAGAD 869
           +RPIAVDWAVPKK++++GA+
Sbjct: 348 KRPIAVDWAVPKKIYSSGAN 367



 Score = 70.1 bits (170), Expect(2) = 2e-22
 Identities = 31/50 (62%), Positives = 38/50 (76%)
 Frame = +3

Query: 12  MGIRKESEQEQEGVPHSPSTIFVSNLPYSYTNSQLEETFGDVGPVRRCFM 161
           MG +K + +      HS ST+FVS+LPYS+T SQLEETF DVGP+RRCFM
Sbjct: 1   MGKKKNTNESGSASEHSSSTLFVSSLPYSFTKSQLEETFSDVGPIRRCFM 50



 Score = 62.8 bits (151), Expect(2) = 2e-22
 Identities = 42/120 (35%), Positives = 58/120 (48%), Gaps = 24/120 (20%)
 Frame = +2

Query: 161 GHSKGAAAEDADRAVELKNGALISGRKIRVKHAMHRPPNEQRKAKSNQ-------DSIKT 319
           G  + A  +DA+RA+E+KNG+ + GRKI VKHAMHR   EQR+AK+ Q       D+ KT
Sbjct: 63  GFVQFALKDDANRAIEIKNGSSVGGRKIAVKHAMHRASLEQRRAKAAQGQGQVQDDATKT 122

Query: 320 XXXXXXXXXXXXXXXXG-----------------QSKVIRKTKALPIELTDKEDCSDKQK 448
                                             + +  RK   L  +LTDKE+CS+KQ+
Sbjct: 123 IDEKGSVASKPEKHVLNVLESGWELWYILSCMLRKPREPRKPAKLVTDLTDKENCSEKQR 182


>ref|XP_004148553.1| PREDICTED: RNA-binding protein 28-like [Cucumis sativus]
          Length = 966

 Score =  211 bits (536), Expect = 4e-52
 Identities = 96/138 (69%), Positives = 121/138 (87%)
 Frame = +3

Query: 450 LAQDGCRMEALAVLYESVRAARASVGVLHQQKVKGGLVWARQLGGEGSKTQKWKLIVRNL 629
           + +DGC+M+  AVL++SV++ARA+V +LHQ+++KGG+VWARQLGGEGSKTQKWK+IVRNL
Sbjct: 243 ILRDGCKMDVSAVLFDSVKSARAAVAILHQKEMKGGVVWARQLGGEGSKTQKWKVIVRNL 302

Query: 630 PFKATVNEISVLFSSAGFVWDVFIPNNLETGLSKGFGFVKFTCKKDAETAIQKVNGQTFG 809
           PFKA   EI   FSSAGFVWDV +P N +TGLSKGF FVKFTCK+DAE+AIQK NG+ FG
Sbjct: 303 PFKAKEKEIKNTFSSAGFVWDVMMPQNSDTGLSKGFAFVKFTCKQDAESAIQKFNGKKFG 362

Query: 810 RRPIAVDWAVPKKLFTAG 863
           +R IAVDWAVPKK++++G
Sbjct: 363 QRTIAVDWAVPKKIYSSG 380



 Score = 68.6 bits (166), Expect(2) = 5e-22
 Identities = 29/35 (82%), Positives = 32/35 (91%)
 Frame = +3

Query: 57  HSPSTIFVSNLPYSYTNSQLEETFGDVGPVRRCFM 161
           H PST+FV+N PYS+TNSQLEETF DVGPVRRCFM
Sbjct: 20  HCPSTVFVNNFPYSFTNSQLEETFSDVGPVRRCFM 54



 Score = 63.2 bits (152), Expect(2) = 5e-22
 Identities = 30/48 (62%), Positives = 36/48 (75%)
 Frame = +2

Query: 161 GHSKGAAAEDADRAVELKNGALISGRKIRVKHAMHRPPNEQRKAKSNQ 304
           G  + A AEDA+RA++LKNG    GRKI VKHAMHR P EQR++K NQ
Sbjct: 67  GFVQFAVAEDANRAIQLKNGLSFEGRKITVKHAMHRAPLEQRRSKENQ 114


>ref|NP_565513.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
           gi|4567275|gb|AAD23688.1| expressed protein [Arabidopsis
           thaliana] gi|16604631|gb|AAL24108.1| unknown protein
           [Arabidopsis thaliana] gi|27754736|gb|AAO22811.1|
           unknown protein [Arabidopsis thaliana]
           gi|330252084|gb|AEC07178.1| RNA recognition
           motif-containing protein [Arabidopsis thaliana]
          Length = 1003

 Score =  207 bits (528), Expect = 3e-51
 Identities = 97/140 (69%), Positives = 113/140 (80%)
 Frame = +3

Query: 450 LAQDGCRMEALAVLYESVRAARASVGVLHQQKVKGGLVWARQLGGEGSKTQKWKLIVRNL 629
           L QDGCR EA AVL+ SV++A A+V  LHQ +VKG L+WARQLGGEGSK QKWKLI+RNL
Sbjct: 279 LTQDGCRAEASAVLFTSVKSACAAVAKLHQTEVKGNLIWARQLGGEGSKAQKWKLIIRNL 338

Query: 630 PFKATVNEISVLFSSAGFVWDVFIPNNLETGLSKGFGFVKFTCKKDAETAIQKVNGQTFG 809
           PF+A  ++I V+FS+ GFVWDVFIP N ETGL KGF FVKFTCKKDA  AI+K NG  FG
Sbjct: 339 PFQAKPSDIKVVFSAVGFVWDVFIPKNFETGLPKGFAFVKFTCKKDAANAIKKFNGHMFG 398

Query: 810 RRPIAVDWAVPKKLFTAGAD 869
           +RPIAVDWAVPK ++   AD
Sbjct: 399 KRPIAVDWAVPKNIYNGAAD 418



 Score = 61.6 bits (148), Expect(2) = 4e-16
 Identities = 26/47 (55%), Positives = 36/47 (76%)
 Frame = +3

Query: 21  RKESEQEQEGVPHSPSTIFVSNLPYSYTNSQLEETFGDVGPVRRCFM 161
           ++E +  +E  PH+ +T+ VS LPYS TN+QLEE F +VGPVRRCF+
Sbjct: 5   KRERKDGEEKSPHAAATVCVSGLPYSITNAQLEEAFSEVGPVRRCFL 51



 Score = 50.1 bits (118), Expect(2) = 4e-16
 Identities = 22/43 (51%), Positives = 31/43 (72%)
 Frame = +2

Query: 170 KGAAAEDADRAVELKNGALISGRKIRVKHAMHRPPNEQRKAKS 298
           K A  ED +RA+ELKNG+ + GR+I VK A HRP  ++R+ K+
Sbjct: 67  KFALQEDVNRAIELKNGSTVGGRRITVKQAAHRPSLQERRTKA 109