BLASTX nr result

ID: Coptis25_contig00014277 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00014277
         (1543 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264075.1| PREDICTED: WPP domain-associated protein-lik...   170   4e-55
emb|CBI31022.3| unnamed protein product [Vitis vinifera]              170   4e-55
ref|XP_002523187.1| Early endosome antigen, putative [Ricinus co...   162   4e-47
ref|XP_002330600.1| predicted protein [Populus trichocarpa] gi|2...   142   3e-42
ref|XP_004134899.1| PREDICTED: WPP domain-associated protein-lik...   150   4e-41

>ref|XP_002264075.1| PREDICTED: WPP domain-associated protein-like [Vitis vinifera]
          Length = 902

 Score =  170 bits (431), Expect(2) = 4e-55
 Identities = 88/148 (59%), Positives = 111/148 (75%)
 Frame = +2

Query: 611  RFKENALSLVVARESGQKKQVE*LSTYVQRLFKTAADFEGQTMEIVEKNNLRLKRIKFQC 790
            R  +NALSLV ARE    KQ+E +  ++  L K  A+FEG+  + +++N+ RL+    Q 
Sbjct: 755  RETQNALSLVEAREREHSKQMESIIVFMNGLSKVMAEFEGRVEKDIKRNSFRLEHANSQL 814

Query: 791  DALVQNAALSRKTELVYKQRLERRYSDLQKAEAEVDLLGDEVNALLSLNEKIYIGLNHYS 970
              L+Q A + R+T L YKQRLERRYSDLQKAE EVDLLGDEV+ALLSL EKIYI L+HYS
Sbjct: 815  TPLIQKANILRRTSLRYKQRLERRYSDLQKAETEVDLLGDEVDALLSLLEKIYIALDHYS 874

Query: 971  PILQHYPGIMEILKLIKRELSGESCKAI 1054
            PILQHYPG++EILKL++RELS ES K +
Sbjct: 875  PILQHYPGVIEILKLVRRELSAESTKPV 902



 Score = 72.8 bits (177), Expect(2) = 4e-55
 Identities = 53/166 (31%), Positives = 85/166 (51%), Gaps = 22/166 (13%)
 Frame = +3

Query: 186  RWGIEDSCMESVIMQEIRGTIFKEAAQDAERRLYLMKMKYEGQSERLVSLEA*VLESEKA 365
            ++ IEDS ME +IMQ +   I++E  +DAE +L +M +KY+  +E  VS+E  V+E EKA
Sbjct: 575  KYEIEDSDMEFIIMQGLSAIIYREVMKDAEAKLNIMNVKYDCANEARVSIEIKVVEKEKA 634

Query: 366  LNSXXXXXXXXXXXXXXXSALLEEKER-----ADQIY----------QDLSSFKDQAI*Q 500
            L                  A LEEKER     AD +           Q+L++ ++    Q
Sbjct: 635  LRLEFDEKERLKQEIILLEASLEEKERSALEIADALVKEKEQFELASQELNNLREHTNQQ 694

Query: 501  EKLVS-------VIKSKFEETLGQTHLYEDKIAKLEKTLKLTIEDL 617
            +KL+S       + K    E L Q  L + +I +L++ L++T ++L
Sbjct: 695  QKLISESSREADITKGNLVEALEQIDLQKVEICELKQKLEITRKEL 740


>emb|CBI31022.3| unnamed protein product [Vitis vinifera]
          Length = 807

 Score =  170 bits (431), Expect(2) = 4e-55
 Identities = 88/148 (59%), Positives = 111/148 (75%)
 Frame = +2

Query: 611  RFKENALSLVVARESGQKKQVE*LSTYVQRLFKTAADFEGQTMEIVEKNNLRLKRIKFQC 790
            R  +NALSLV ARE    KQ+E +  ++  L K  A+FEG+  + +++N+ RL+    Q 
Sbjct: 660  RETQNALSLVEAREREHSKQMESIIVFMNGLSKVMAEFEGRVEKDIKRNSFRLEHANSQL 719

Query: 791  DALVQNAALSRKTELVYKQRLERRYSDLQKAEAEVDLLGDEVNALLSLNEKIYIGLNHYS 970
              L+Q A + R+T L YKQRLERRYSDLQKAE EVDLLGDEV+ALLSL EKIYI L+HYS
Sbjct: 720  TPLIQKANILRRTSLRYKQRLERRYSDLQKAETEVDLLGDEVDALLSLLEKIYIALDHYS 779

Query: 971  PILQHYPGIMEILKLIKRELSGESCKAI 1054
            PILQHYPG++EILKL++RELS ES K +
Sbjct: 780  PILQHYPGVIEILKLVRRELSAESTKPV 807



 Score = 72.8 bits (177), Expect(2) = 4e-55
 Identities = 53/166 (31%), Positives = 85/166 (51%), Gaps = 22/166 (13%)
 Frame = +3

Query: 186 RWGIEDSCMESVIMQEIRGTIFKEAAQDAERRLYLMKMKYEGQSERLVSLEA*VLESEKA 365
           ++ IEDS ME +IMQ +   I++E  +DAE +L +M +KY+  +E  VS+E  V+E EKA
Sbjct: 480 KYEIEDSDMEFIIMQGLSAIIYREVMKDAEAKLNIMNVKYDCANEARVSIEIKVVEKEKA 539

Query: 366 LNSXXXXXXXXXXXXXXXSALLEEKER-----ADQIY----------QDLSSFKDQAI*Q 500
           L                  A LEEKER     AD +           Q+L++ ++    Q
Sbjct: 540 LRLEFDEKERLKQEIILLEASLEEKERSALEIADALVKEKEQFELASQELNNLREHTNQQ 599

Query: 501 EKLVS-------VIKSKFEETLGQTHLYEDKIAKLEKTLKLTIEDL 617
           +KL+S       + K    E L Q  L + +I +L++ L++T ++L
Sbjct: 600 QKLISESSREADITKGNLVEALEQIDLQKVEICELKQKLEITRKEL 645


>ref|XP_002523187.1| Early endosome antigen, putative [Ricinus communis]
            gi|223537594|gb|EEF39218.1| Early endosome antigen,
            putative [Ricinus communis]
          Length = 903

 Score =  162 bits (410), Expect(2) = 4e-47
 Identities = 87/145 (60%), Positives = 107/145 (73%)
 Frame = +2

Query: 620  ENALSLVVARESGQKKQVE*LSTYVQRLFKTAADFEGQTMEIVEKNNLRLKRIKFQCDAL 799
            +N L LV ARE   +KQ+      VQ L K   DFE +T E +  N+LRL+ +  Q  +L
Sbjct: 759  QNTLVLVEAREIEYRKQINSTIILVQELSKAVTDFECRTTEDLRVNSLRLEHLSSQLSSL 818

Query: 800  VQNAALSRKTELVYKQRLERRYSDLQKAEAEVDLLGDEVNALLSLNEKIYIGLNHYSPIL 979
            VQ+A   R+T L+YKQ+LE R SDL+KAEAEVDLLGDEV+ LLSL EKIYI L+HYSPIL
Sbjct: 819  VQDANKLRRTGLMYKQKLEVRCSDLRKAEAEVDLLGDEVDTLLSLLEKIYIALDHYSPIL 878

Query: 980  QHYPGIMEILKLIKRELSGESCKAI 1054
            QHYPGIME+LKL++RELSGES K +
Sbjct: 879  QHYPGIMEVLKLVRRELSGESVKPV 903



 Score = 53.9 bits (128), Expect(2) = 4e-47
 Identities = 40/166 (24%), Positives = 77/166 (46%), Gaps = 22/166 (13%)
 Frame = +3

Query: 198  EDSCMESVIMQEIRGTIFKEAAQDAERRLYLMKMKYEGQSERLVSLEA*VLESEKALN-- 371
            +DS +ES+IM  +   + +E+ ++AE +     ++Y  ++E  VS E   LE E+AL   
Sbjct: 580  DDSVIESIIMPGLCEIVLRESFKEAEEKAVTWNLRYINENEARVSFEMAALEKEQALRLN 639

Query: 372  -------------SXXXXXXXXXXXXXXXSALLEEKERADQIYQDLSSFKDQAI*QEKLV 512
                                          AL +EKE+ +   Q L + + Q + Q++LV
Sbjct: 640  IAEKDKLEQEMLLLRAVIDDKTNLVLEVTGALAQEKEKYELASQKLDNLRVQTMHQKELV 699

Query: 513  S-------VIKSKFEETLGQTHLYEDKIAKLEKTLKLTIEDLRKML 629
            S       ++K   ++ L +  + + +I+KL + LK+  + LR+ +
Sbjct: 700  SKYDGELQIVKDDLDKALEKIKMDKGEISKLREQLKIVTQKLREAI 745


>ref|XP_002330600.1| predicted protein [Populus trichocarpa] gi|222872158|gb|EEF09289.1|
            predicted protein [Populus trichocarpa]
          Length = 660

 Score =  142 bits (357), Expect(2) = 3e-42
 Identities = 73/141 (51%), Positives = 101/141 (71%)
 Frame = +2

Query: 632  SLVVARESGQKKQVE*LSTYVQRLFKTAADFEGQTMEIVEKNNLRLKRIKFQCDALVQNA 811
            SLV ARE   ++Q++ +   V  L +   DFE +  + +++++LRL+ +  Q  +L+Q A
Sbjct: 520  SLVEAREREHREQLDSIVVLVNGLSRAVTDFESRATKEIKRSSLRLENLSSQSGSLIQKA 579

Query: 812  ALSRKTELVYKQRLERRYSDLQKAEAEVDLLGDEVNALLSLNEKIYIGLNHYSPILQHYP 991
             +  +   ++KQ+LE R SDLQKAEAEVDLLGDEV  LLSL EKIYI L+HYSPIL+HY 
Sbjct: 580  GILTRMGFLHKQKLESRCSDLQKAEAEVDLLGDEVENLLSLLEKIYIALDHYSPILKHYS 639

Query: 992  GIMEILKLIKRELSGESCKAI 1054
            GI EILKL++REL+GES K +
Sbjct: 640  GITEILKLVRRELNGESMKPV 660



 Score = 58.2 bits (139), Expect(2) = 3e-42
 Identities = 46/172 (26%), Positives = 81/172 (47%), Gaps = 22/172 (12%)
 Frame = +3

Query: 174 KAIFRWGIEDSCMESVIMQEIRGTIFKEAAQDAERRLYLMKMKYEGQSERLVSLEA*VLE 353
           K+  +  IEDS MES+I Q +     +EA ++AE +L  +  KY  +++  ++LE   +E
Sbjct: 332 KSASKLEIEDSDMESIITQGLLEVGLQEAFKEAEEKLGSLNQKYVDENKVRLTLEMEAME 391

Query: 354 SEKALNSXXXXXXXXXXXXXXXSALLE---------------EKERADQIYQDLSSFKDQ 488
            EKAL                 +A ++               EKE  +   ++L + + Q
Sbjct: 392 KEKALRMSIAEKEKLDQDIHLLTATIQEKDKLVRESTDALEKEKENLELASRELGNLRAQ 451

Query: 489 AI*QEKLVS-------VIKSKFEETLGQTHLYEDKIAKLEKTLKLTIEDLRK 623
              Q  L+S       +IK    E L +  L E++I+KL++ ++L  E+LR+
Sbjct: 452 TSQQRLLISQNSEESEIIKHDLLEALDKNKLCEEEISKLQEKIQLVTENLRE 503


>ref|XP_004134899.1| PREDICTED: WPP domain-associated protein-like [Cucumis sativus]
          Length = 881

 Score =  150 bits (379), Expect(2) = 4e-41
 Identities = 74/135 (54%), Positives = 104/135 (77%)
 Frame = +2

Query: 647  RESGQKKQVE*LSTYVQRLFKTAADFEGQTMEIVEKNNLRLKRIKFQCDALVQNAALSRK 826
            +E   +KQ+E +   VQ L K   DFE + ++ + +NN RL+ + F+  +L+Q+A++ ++
Sbjct: 746  KEKEYRKQMEMVIFVVQELSKEVFDFEHRVIDYISRNNERLESLSFETKSLIQDASMVKR 805

Query: 827  TELVYKQRLERRYSDLQKAEAEVDLLGDEVNALLSLNEKIYIGLNHYSPILQHYPGIMEI 1006
              L+YKQRLE+R SDLQKAEAEVDLLGDEV+ALL L EK+YI L+HYSPIL+HYPGI+E 
Sbjct: 806  DGLIYKQRLEKRCSDLQKAEAEVDLLGDEVDALLRLLEKMYIALDHYSPILKHYPGIVET 865

Query: 1007 LKLIKRELSGESCKA 1051
            LKL+KREL G++ +A
Sbjct: 866  LKLVKRELRGDTMEA 880



 Score = 45.8 bits (107), Expect(2) = 4e-41
 Identities = 39/160 (24%), Positives = 70/160 (43%), Gaps = 22/160 (13%)
 Frame = +3

Query: 213  ESVIMQEIRGTIFKEAAQDAERRLYLMKMKYEGQSERLVSLEA*VLESEKALNSXXXXXX 392
            ES+IMQ +   + +E+ ++AE ++  +  +Y  +    +SLE  VL   +AL        
Sbjct: 563  ESIIMQALLEVVLQESLREAEEKIISLHNRYMQEMSTRLSLEKEVLHCGQALEIEIFKNK 622

Query: 393  XXXXXXXXXSALLEEKERADQ---------------IYQDLSSFKDQAI*QEKLV----- 512
                      ALL+EKE   Q                 +++ S KDQ   QE L+     
Sbjct: 623  KLEAELISSRALLKEKEELVQEITFVLEDEKKKLALACEEVGSLKDQTNSQEILIFKSHE 682

Query: 513  --SVIKSKFEETLGQTHLYEDKIAKLEKTLKLTIEDLRKM 626
              +  K K  E + +  L E++  +L++ L+  + + RK+
Sbjct: 683  ESNTTKRKLTEAMQKVGLLEEENCELKRKLEQAMIEFRKV 722


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