BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00014264
         (738 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAT40496.2| Rar1 protein, putative [Solanum demissum]              130   2e-42
gb|ACT98264.1| rar [Malus hupehensis]                                 126   4e-42
ref|XP_002269178.1| PREDICTED: cysteine and histidine-rich domai...   128   7e-42
emb|CBI24497.3| unnamed protein product [Vitis vinifera]              128   7e-42
gb|ACU14236.1| unknown [Glycine max]                                  122   8e-41

>gb|AAT40496.2| Rar1 protein, putative [Solanum demissum]
          Length = 182

 Score =  130 bits (328), Expect(2) = 2e-42
 Identities = 66/130 (50%), Positives = 77/130 (59%), Gaps = 7/130 (5%)
 Frame = +3

Query: 3   CKTGKHTTEKLVITKAVSTTMKPIP------SPLDXXXXXXXXXXXXQGFFCSEHGSQPK 164
           CKTGKHTTEK VI    +T  K IP      +P+             QGFFCS+HGSQP+
Sbjct: 17  CKTGKHTTEKPVIATPSATKNKAIPVPVSVPAPMTNASPKEACPRCHQGFFCSDHGSQPR 76

Query: 165 EENSKXXXXXXXXXXXXXXXXKHD-PAPVKKIVGLNEPQTCRNKGCGKTFKEKDNHDTAC 341
           E   K                + D PAPVKK + +NEPQ C+NK CGKTF EK+NHDTAC
Sbjct: 77  EAIPKASNTVTSVPSGSNTVVQQDHPAPVKKKIDINEPQICKNKSCGKTFTEKENHDTAC 136

Query: 342 SYHPGPAVFH 371
           SYHPGPA+FH
Sbjct: 137 SYHPGPAIFH 146



 Score = 68.2 bits (165), Expect(2) = 2e-42
 Identities = 25/31 (80%), Positives = 28/31 (90%)
 Frame = +2

Query: 458 WKCCDIHVKEFDEFIDIPPCAKGWHNSDPVS 550
           WKCCD+HVKEFDEF+ IP C KGWHN+DPVS
Sbjct: 152 WKCCDVHVKEFDEFMTIPACTKGWHNADPVS 182


>gb|ACT98264.1| rar [Malus hupehensis]
          Length = 225

 Score =  126 bits (316), Expect(2) = 4e-42
 Identities = 63/125 (50%), Positives = 72/125 (57%), Gaps = 2/125 (1%)
 Frame = +3

Query: 3   CKTGKHTTEKLVITKAVSTTMKPIPS--PLDXXXXXXXXXXXXQGFFCSEHGSQPKEENS 176
           CKTGKHTTEK V+ K       P P+  P              QGFFCSEHG+Q KE  S
Sbjct: 65  CKTGKHTTEKPVLAKPKPKAPVPAPTAAPATDASSKQSCSRCRQGFFCSEHGAQAKELKS 124

Query: 177 KXXXXXXXXXXXXXXXXKHDPAPVKKIVGLNEPQTCRNKGCGKTFKEKDNHDTACSYHPG 356
           K                +   AP KKIV +N+PQTC NKGC +TFKEKDNH+ ACSYHPG
Sbjct: 125 KPVNVETTPIPESITDDQGTSAPPKKIVDINQPQTCMNKGCDQTFKEKDNHENACSYHPG 184

Query: 357 PAVFH 371
           PA+FH
Sbjct: 185 PAIFH 189



 Score = 71.6 bits (174), Expect(2) = 4e-42
 Identities = 26/31 (83%), Positives = 29/31 (93%)
 Frame = +2

Query: 458 WKCCDIHVKEFDEFIDIPPCAKGWHNSDPVS 550
           WKCCD+HVKEFDEF+ IPPC KGWHN+DPVS
Sbjct: 195 WKCCDVHVKEFDEFMSIPPCTKGWHNADPVS 225


>ref|XP_002269178.1| PREDICTED: cysteine and histidine-rich domain-containing protein
           RAR1-like [Vitis vinifera]
          Length = 219

 Score =  128 bits (322), Expect(2) = 7e-42
 Identities = 66/124 (53%), Positives = 73/124 (58%), Gaps = 1/124 (0%)
 Frame = +3

Query: 3   CKTGKHTTEKLVITK-AVSTTMKPIPSPLDXXXXXXXXXXXXQGFFCSEHGSQPKEENSK 179
           CKTGKHTTEK V+ K A      P P+P              QGFFCSEHGSQ +E+  +
Sbjct: 64  CKTGKHTTEKPVLAKPAPPKNQVPAPAPAPDASSKQTCSRCQQGFFCSEHGSQAREKRLQ 123

Query: 180 XXXXXXXXXXXXXXXXKHDPAPVKKIVGLNEPQTCRNKGCGKTFKEKDNHDTACSYHPGP 359
                               AP KKIV +N+PQTC NKGCG TFKEKDNHDTACSYHPGP
Sbjct: 124 TDLPAENNTGVQEGLA----APAKKIVDINQPQTCGNKGCGMTFKEKDNHDTACSYHPGP 179

Query: 360 AVFH 371
           AVFH
Sbjct: 180 AVFH 183



 Score = 68.6 bits (166), Expect(2) = 7e-42
 Identities = 25/31 (80%), Positives = 28/31 (90%)
 Frame = +2

Query: 458 WKCCDIHVKEFDEFIDIPPCAKGWHNSDPVS 550
           WKCCDIHVKEFDEF+ IPPC KGWHN++P S
Sbjct: 189 WKCCDIHVKEFDEFMSIPPCTKGWHNANPAS 219


>emb|CBI24497.3| unnamed protein product [Vitis vinifera]
          Length = 200

 Score =  128 bits (322), Expect(2) = 7e-42
 Identities = 66/124 (53%), Positives = 73/124 (58%), Gaps = 1/124 (0%)
 Frame = +3

Query: 3   CKTGKHTTEKLVITK-AVSTTMKPIPSPLDXXXXXXXXXXXXQGFFCSEHGSQPKEENSK 179
           CKTGKHTTEK V+ K A      P P+P              QGFFCSEHGSQ +E+  +
Sbjct: 45  CKTGKHTTEKPVLAKPAPPKNQVPAPAPAPDASSKQTCSRCQQGFFCSEHGSQAREKRLQ 104

Query: 180 XXXXXXXXXXXXXXXXKHDPAPVKKIVGLNEPQTCRNKGCGKTFKEKDNHDTACSYHPGP 359
                               AP KKIV +N+PQTC NKGCG TFKEKDNHDTACSYHPGP
Sbjct: 105 TDLPAENNTGVQEGLA----APAKKIVDINQPQTCGNKGCGMTFKEKDNHDTACSYHPGP 160

Query: 360 AVFH 371
           AVFH
Sbjct: 161 AVFH 164



 Score = 68.6 bits (166), Expect(2) = 7e-42
 Identities = 25/31 (80%), Positives = 28/31 (90%)
 Frame = +2

Query: 458 WKCCDIHVKEFDEFIDIPPCAKGWHNSDPVS 550
           WKCCDIHVKEFDEF+ IPPC KGWHN++P S
Sbjct: 170 WKCCDIHVKEFDEFMSIPPCTKGWHNANPAS 200


>gb|ACU14236.1| unknown [Glycine max]
          Length = 224

 Score =  122 bits (306), Expect(2) = 8e-41
 Identities = 68/129 (52%), Positives = 73/129 (56%), Gaps = 6/129 (4%)
 Frame = +3

Query: 3   CKTGKHTTEKLVITKAVSTTMKPIPSPL----DXXXXXXXXXXXXQGFFCSEHGSQPKEE 170
           CKTGKHTT K VIT    +TM   PSP                  QGFFCS+HGSQ K  
Sbjct: 64  CKTGKHTTVKQVITPVKKSTM---PSPTAVCSTNASSKDSCPRCQQGFFCSDHGSQSKPA 120

Query: 171 N--SKXXXXXXXXXXXXXXXXKHDPAPVKKIVGLNEPQTCRNKGCGKTFKEKDNHDTACS 344
           N                     H P P KKIV +NEPQ C+NKGCG+TFKEKDNHDTACS
Sbjct: 121 NIIGDKAANLAGDASVDNNSSVHAPKP-KKIVDINEPQVCKNKGCGQTFKEKDNHDTACS 179

Query: 345 YHPGPAVFH 371
           YHPGPAVFH
Sbjct: 180 YHPGPAVFH 188



 Score = 71.2 bits (173), Expect(2) = 8e-41
 Identities = 27/31 (87%), Positives = 29/31 (93%)
 Frame = +2

Query: 458 WKCCDIHVKEFDEFIDIPPCAKGWHNSDPVS 550
           WKCCDIHVKEFDEF+ IPPCAKGWHN+DP S
Sbjct: 194 WKCCDIHVKEFDEFMSIPPCAKGWHNADPES 224