BLASTX nr result

ID: Coptis25_contig00014260 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00014260
         (576 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN64544.1| hypothetical protein VITISV_033383 [Vitis vinifera]    96   9e-39
ref|XP_002264112.2| PREDICTED: LOW QUALITY PROTEIN: transcriptio...    96   6e-38
emb|CBI29731.3| unnamed protein product [Vitis vinifera]               96   6e-38
ref|XP_003592963.1| TCP family transcription factor-like protein...    94   1e-37
ref|XP_003539396.1| PREDICTED: transcription factor TCP8-like [G...    94   2e-37

>emb|CAN64544.1| hypothetical protein VITISV_033383 [Vitis vinifera]
          Length = 550

 Score = 95.5 bits (236), Expect(2) = 9e-39
 Identities = 52/61 (85%), Positives = 53/61 (86%)
 Frame = +1

Query: 367 HKSDGETIEWLLQQAEPAIIAATGTGTIPANFSTLNVSLRSGGGSSTIATPMPSKSIASS 546
           HKSDGETIEWLLQQAEPAIIAATGTGTIPANFSTLNVSLRS G  STI+ P PSKS   S
Sbjct: 212 HKSDGETIEWLLQQAEPAIIAATGTGTIPANFSTLNVSLRSSG--STISAP-PSKSAPHS 268

Query: 547 F 549
           F
Sbjct: 269 F 269



 Score = 90.5 bits (223), Expect(2) = 9e-39
 Identities = 44/59 (74%), Positives = 47/59 (79%)
 Frame = +3

Query: 129 QEQEQXXXXXXXXXXXXRSSKDRHTKVDGRGRRIRMPATCAARVFQLTRELGHKSDGET 305
           Q+Q+Q            RS+KDRHTKVDGRGRRIRMPATCAARVFQLTRELGHKSDGET
Sbjct: 160 QQQQQQQLTIGTNPPAKRSTKDRHTKVDGRGRRIRMPATCAARVFQLTRELGHKSDGET 218


>ref|XP_002264112.2| PREDICTED: LOW QUALITY PROTEIN: transcription factor TCP8-like
           [Vitis vinifera]
          Length = 538

 Score = 95.5 bits (236), Expect(2) = 6e-38
 Identities = 52/61 (85%), Positives = 53/61 (86%)
 Frame = +1

Query: 367 HKSDGETIEWLLQQAEPAIIAATGTGTIPANFSTLNVSLRSGGGSSTIATPMPSKSIASS 546
           HKSDGETIEWLLQQAEPAIIAATGTGTIPANFSTLNVSLRS G  STI+ P PSKS   S
Sbjct: 200 HKSDGETIEWLLQQAEPAIIAATGTGTIPANFSTLNVSLRSSG--STISAP-PSKSAPHS 256

Query: 547 F 549
           F
Sbjct: 257 F 257



 Score = 87.8 bits (216), Expect(2) = 6e-38
 Identities = 41/42 (97%), Positives = 42/42 (100%)
 Frame = +3

Query: 180 RSSKDRHTKVDGRGRRIRMPATCAARVFQLTRELGHKSDGET 305
           RS+KDRHTKVDGRGRRIRMPATCAARVFQLTRELGHKSDGET
Sbjct: 165 RSTKDRHTKVDGRGRRIRMPATCAARVFQLTRELGHKSDGET 206


>emb|CBI29731.3| unnamed protein product [Vitis vinifera]
          Length = 387

 Score = 95.5 bits (236), Expect(2) = 6e-38
 Identities = 52/61 (85%), Positives = 53/61 (86%)
 Frame = +1

Query: 367 HKSDGETIEWLLQQAEPAIIAATGTGTIPANFSTLNVSLRSGGGSSTIATPMPSKSIASS 546
           HKSDGETIEWLLQQAEPAIIAATGTGTIPANFSTLNVSLRS G  STI+ P PSKS   S
Sbjct: 147 HKSDGETIEWLLQQAEPAIIAATGTGTIPANFSTLNVSLRSSG--STISAP-PSKSAPHS 203

Query: 547 F 549
           F
Sbjct: 204 F 204



 Score = 87.8 bits (216), Expect(2) = 6e-38
 Identities = 41/42 (97%), Positives = 42/42 (100%)
 Frame = +3

Query: 180 RSSKDRHTKVDGRGRRIRMPATCAARVFQLTRELGHKSDGET 305
           RS+KDRHTKVDGRGRRIRMPATCAARVFQLTRELGHKSDGET
Sbjct: 112 RSTKDRHTKVDGRGRRIRMPATCAARVFQLTRELGHKSDGET 153


>ref|XP_003592963.1| TCP family transcription factor-like protein [Medicago truncatula]
           gi|357445449|ref|XP_003593002.1| TCP family
           transcription factor-like protein [Medicago truncatula]
           gi|355482011|gb|AES63214.1| TCP family transcription
           factor-like protein [Medicago truncatula]
           gi|355482050|gb|AES63253.1| TCP family transcription
           factor-like protein [Medicago truncatula]
          Length = 487

 Score = 94.4 bits (233), Expect(2) = 1e-37
 Identities = 51/61 (83%), Positives = 53/61 (86%)
 Frame = +1

Query: 367 HKSDGETIEWLLQQAEPAIIAATGTGTIPANFSTLNVSLRSGGGSSTIATPMPSKSIASS 546
           HKSDGETIEWLLQQAEPAIIAATGTGTIPANFSTLNVSLRS G  ST++ P PSKS   S
Sbjct: 163 HKSDGETIEWLLQQAEPAIIAATGTGTIPANFSTLNVSLRSSG--STLSAP-PSKSAPLS 219

Query: 547 F 549
           F
Sbjct: 220 F 220



 Score = 87.8 bits (216), Expect(2) = 1e-37
 Identities = 41/42 (97%), Positives = 42/42 (100%)
 Frame = +3

Query: 180 RSSKDRHTKVDGRGRRIRMPATCAARVFQLTRELGHKSDGET 305
           RS+KDRHTKVDGRGRRIRMPATCAARVFQLTRELGHKSDGET
Sbjct: 128 RSTKDRHTKVDGRGRRIRMPATCAARVFQLTRELGHKSDGET 169


>ref|XP_003539396.1| PREDICTED: transcription factor TCP8-like [Glycine max]
          Length = 420

 Score = 93.6 bits (231), Expect(2) = 2e-37
 Identities = 50/61 (81%), Positives = 53/61 (86%)
 Frame = +1

Query: 367 HKSDGETIEWLLQQAEPAIIAATGTGTIPANFSTLNVSLRSGGGSSTIATPMPSKSIASS 546
           HKSDGETIEWLLQQAEPAIIAATGTGTIPANFSTLNVSLRS G  ST++ P PSKS   +
Sbjct: 96  HKSDGETIEWLLQQAEPAIIAATGTGTIPANFSTLNVSLRSSG--STLSAP-PSKSAPHT 152

Query: 547 F 549
           F
Sbjct: 153 F 153



 Score = 87.8 bits (216), Expect(2) = 2e-37
 Identities = 41/42 (97%), Positives = 42/42 (100%)
 Frame = +3

Query: 180 RSSKDRHTKVDGRGRRIRMPATCAARVFQLTRELGHKSDGET 305
           RS+KDRHTKVDGRGRRIRMPATCAARVFQLTRELGHKSDGET
Sbjct: 61  RSTKDRHTKVDGRGRRIRMPATCAARVFQLTRELGHKSDGET 102


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