BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00014250
         (1546 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285276.2| PREDICTED: transcription initiation factor T...   149   2e-33
ref|XP_003631761.1| PREDICTED: transcription initiation factor T...   149   2e-33
ref|XP_003526182.1| PREDICTED: transcription initiation factor T...   133   1e-28
ref|XP_004145505.1| PREDICTED: transcription initiation factor T...   131   4e-28
ref|XP_002309672.1| predicted protein [Populus trichocarpa] gi|2...   130   9e-28

>ref|XP_002285276.2| PREDICTED: transcription initiation factor TFIID subunit 5-like
           isoform 1 [Vitis vinifera]
          Length = 667

 Score =  149 bits (376), Expect = 2e-33
 Identities = 85/170 (50%), Positives = 111/170 (65%), Gaps = 3/170 (1%)
 Frame = +2

Query: 41  KNKWPLSVCLFSHRQYSYELLLQYLHKTQSITMLGIINEHINFQVSPGQPISISDDADAV 220
           ++K  + +C     QYSYELLLQYLHKTQSITMLG+INEHINFQVSPGQP SISDDA+ V
Sbjct: 151 QSKVSIKIC-----QYSYELLLQYLHKTQSITMLGVINEHINFQVSPGQPASISDDAEVV 205

Query: 221 ILVGSRYSKADK*ERITLG---VACRFY*RSSREGE*FAVRF*EKLKAKSKRGMWMKTRR 391
            L+GS    A++  +  +    +      R  + G   +    EK + + K     + ++
Sbjct: 206 TLIGSSQDDANQINQKEIHWGLLEGSLEERLEKAGGLLSDS--EKAEGEVKETDTEENKK 263

Query: 392 N*GDGGKQGISVKKLKKDKIVGTTGKSVCSESNTVSMAPRVKPELTLPIL 541
              +GGKQG S+KKLKKDK+VG  GK+   E+N VSMAPRVKPEL LP++
Sbjct: 264 RSAEGGKQGSSIKKLKKDKVVGAAGKTARPEANAVSMAPRVKPELALPVM 313


>ref|XP_003631761.1| PREDICTED: transcription initiation factor TFIID subunit 5-like
           isoform 2 [Vitis vinifera] gi|296082065|emb|CBI21070.3|
           unnamed protein product [Vitis vinifera]
          Length = 676

 Score =  149 bits (376), Expect = 2e-33
 Identities = 85/170 (50%), Positives = 111/170 (65%), Gaps = 3/170 (1%)
 Frame = +2

Query: 41  KNKWPLSVCLFSHRQYSYELLLQYLHKTQSITMLGIINEHINFQVSPGQPISISDDADAV 220
           ++K  + +C     QYSYELLLQYLHKTQSITMLG+INEHINFQVSPGQP SISDDA+ V
Sbjct: 158 QSKVSIKIC-----QYSYELLLQYLHKTQSITMLGVINEHINFQVSPGQPASISDDAEVV 212

Query: 221 ILVGSRYSKADK*ERITLG---VACRFY*RSSREGE*FAVRF*EKLKAKSKRGMWMKTRR 391
            L+GS    A++  +  +    +      R  + G   +    EK + + K     + ++
Sbjct: 213 TLIGSSQDDANQINQKEIHWGLLEGSLEERLEKAGGLLSDS--EKAEGEVKETDTEENKK 270

Query: 392 N*GDGGKQGISVKKLKKDKIVGTTGKSVCSESNTVSMAPRVKPELTLPIL 541
              +GGKQG S+KKLKKDK+VG  GK+   E+N VSMAPRVKPEL LP++
Sbjct: 271 RSAEGGKQGSSIKKLKKDKVVGAAGKTARPEANAVSMAPRVKPELALPVM 320


>ref|XP_003526182.1| PREDICTED: transcription initiation factor TFIID subunit 5-like
           [Glycine max]
          Length = 663

 Score =  133 bits (335), Expect = 1e-28
 Identities = 80/170 (47%), Positives = 108/170 (63%), Gaps = 3/170 (1%)
 Frame = +2

Query: 41  KNKWPLSVCLFSHRQYSYELLLQYLHKTQSITMLGIINEHINFQVSPGQPISISDDADAV 220
           K+K+ + +C     +YSYELLLQ+LH TQS T+LGIINEHINFQV+PGQP  ISDD +AV
Sbjct: 151 KSKFNIKIC-----EYSYELLLQHLHSTQSTTILGIINEHINFQVTPGQPSLISDDPEAV 205

Query: 221 ILVGSRYSKADK*ERITLG---VACRFY*RSSREGE*FAVRF*EKLKAKSKRGMWMKTRR 391
            L GS    A++  +  +    +      R  + G   +    EK + ++K G   +T++
Sbjct: 206 TLTGSSQEAANQINQKEIHWGLLEDSLEERLEKAGALLSDS--EKGEGEAKEGENDETKK 263

Query: 392 N*GDGGKQGISVKKLKKDKIVGTTGKSVCSESNTVSMAPRVKPELTLPIL 541
              +GGKQG SVKK+KKDK    TGKS   E+NT+  APRVKPEL LP++
Sbjct: 264 RSIEGGKQGASVKKVKKDKGGSATGKSAKPEANTIPSAPRVKPELPLPVI 313


>ref|XP_004145505.1| PREDICTED: transcription initiation factor TFIID subunit 5-like
           [Cucumis sativus] gi|449485181|ref|XP_004157092.1|
           PREDICTED: transcription initiation factor TFIID subunit
           5-like [Cucumis sativus]
          Length = 674

 Score =  131 bits (330), Expect = 4e-28
 Identities = 76/154 (49%), Positives = 100/154 (64%), Gaps = 1/154 (0%)
 Frame = +2

Query: 83  QYSYELLLQYLHKTQSITMLGIINEHINFQVSPGQPISISDDADAVILVGSRYSKADK*E 262
           QYSYE+LLQYLHKTQ+  +LGIINE INFQV PGQP SISDDA+ V L GS    A++  
Sbjct: 162 QYSYEMLLQYLHKTQTTVILGIINERINFQVFPGQPSSISDDAELVTLTGSTQDTANQIN 221

Query: 263 RITLGVACRFY*RSSR-EGE*FAVRF*EKLKAKSKRGMWMKTRRN*GDGGKQGISVKKLK 439
           +  +           R E     +   EK + ++K G   + ++   +GGKQG S+KK+K
Sbjct: 222 KKEVHWGLLEDSLEERLEKAAGLLSDSEKAEGETKDGDVDENKKRTAEGGKQGGSIKKVK 281

Query: 440 KDKIVGTTGKSVCSESNTVSMAPRVKPELTLPIL 541
           KDK    TGK++ +E+N+ SMAPRVKPEL LPI+
Sbjct: 282 KDKTASATGKTLRAEANSASMAPRVKPELALPII 315


>ref|XP_002309672.1| predicted protein [Populus trichocarpa] gi|222855648|gb|EEE93195.1|
           predicted protein [Populus trichocarpa]
          Length = 675

 Score =  130 bits (327), Expect = 9e-28
 Identities = 75/156 (48%), Positives = 100/156 (64%), Gaps = 3/156 (1%)
 Frame = +2

Query: 83  QYSYELLLQYLHKTQSITMLGIINEHINFQVSPGQPISISDDADAVILVGSRYSKADK*E 262
           QYS EL++QYL K++S  +LGI+NEHINFQVSPGQPISISDD DAV L+GS    A++  
Sbjct: 166 QYSDELMMQYLRKSKSTIILGIVNEHINFQVSPGQPISISDDPDAVTLIGSSQDAANQIN 225

Query: 263 RITLG---VACRFY*RSSREGE*FAVRF*EKLKAKSKRGMWMKTRRN*GDGGKQGISVKK 433
           +  +    +      R  + G   +    EK + ++K G   + ++   DGGKQG S+KK
Sbjct: 226 KKEIHWGLLEDSLEERLEKTGGFLSDS--EKTEGETKEGDMDENKKRSMDGGKQGASIKK 283

Query: 434 LKKDKIVGTTGKSVCSESNTVSMAPRVKPELTLPIL 541
            KKDK    T K+V  E+NTV  APRVKPEL LP++
Sbjct: 284 SKKDKAASATAKAVRLEANTVPAAPRVKPELPLPVM 319