BLASTX nr result
ID: Coptis25_contig00014243
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00014243 (867 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002311376.1| predicted protein [Populus trichocarpa] gi|2... 175 1e-41 ref|XP_002519259.1| poly(A) polymerase, putative [Ricinus commun... 173 4e-41 ref|XP_002279844.1| PREDICTED: poly(A) polymerase [Vitis vinifer... 172 7e-41 emb|CAN79659.1| hypothetical protein VITISV_014509 [Vitis vinifera] 172 7e-41 ref|XP_002882480.1| polynucleotide adenylyltransferase [Arabidop... 134 3e-29 >ref|XP_002311376.1| predicted protein [Populus trichocarpa] gi|222851196|gb|EEE88743.1| predicted protein [Populus trichocarpa] Length = 483 Score = 175 bits (443), Expect = 1e-41 Identities = 84/145 (57%), Positives = 97/145 (66%) Frame = +2 Query: 2 ELGNWVGWVKSRFRCLLLKLEEVQGLCDPNPTVYVDPDLGIPNTVFYWGLQPGRTNFRDA 181 ELG+WVGWVKS FRCLLLKLE VQG CDPNP YVD D PN VFYWGL R NF Sbjct: 336 ELGDWVGWVKSHFRCLLLKLEAVQGFCDPNPMEYVDMDASEPNVVFYWGLNRSRCNFVYI 395 Query: 182 GLVEEYFMKHITNGYQGSIATLELSIVDSAQLPKDTHFDSVNGNASKGYWRMFDCNQHRI 361 VEE F + I GY G +ELSIV +++LPK+ FDS NG K W+M D NQ R Sbjct: 396 EPVEEDFSRSIYCGYYGIRGKMELSIVQASELPKNARFDSGNGKKMKACWKMLDYNQRRT 455 Query: 362 PIYSDYLPDYVVGYMAINGDSEHPT 436 P YS +LP Y VGY+ NGD+E+P+ Sbjct: 456 PAYSQHLPSYFVGYVESNGDTEYPS 480 >ref|XP_002519259.1| poly(A) polymerase, putative [Ricinus communis] gi|223541574|gb|EEF43123.1| poly(A) polymerase, putative [Ricinus communis] Length = 492 Score = 173 bits (439), Expect = 4e-41 Identities = 81/145 (55%), Positives = 104/145 (71%) Frame = +2 Query: 2 ELGNWVGWVKSRFRCLLLKLEEVQGLCDPNPTVYVDPDLGIPNTVFYWGLQPGRTNFRDA 181 E+G+WVGWVKSRFR LLLKLE +QG CDP+P Y D D+ PN VFYWGL P R+N+ D Sbjct: 346 EVGDWVGWVKSRFRALLLKLEGLQGQCDPSPVEYADRDVSEPNVVFYWGLNPSRSNYIDL 405 Query: 182 GLVEEYFMKHITNGYQGSIATLELSIVDSAQLPKDTHFDSVNGNASKGYWRMFDCNQHRI 361 VEE F+++I +GY G+ LELSIV +A+LPK+ F+S NG K YW++ D + R Sbjct: 406 ESVEEDFLRNIYSGYHGTRRKLELSIVKAAELPKNAQFNSGNGKKMKAYWKVVD-KEQRT 464 Query: 362 PIYSDYLPDYVVGYMAINGDSEHPT 436 P YS +LP Y VGY+A NGD+E P+ Sbjct: 465 PAYSQHLPGYFVGYLATNGDTECPS 489 >ref|XP_002279844.1| PREDICTED: poly(A) polymerase [Vitis vinifera] gi|296083219|emb|CBI22855.3| unnamed protein product [Vitis vinifera] Length = 563 Score = 172 bits (437), Expect = 7e-41 Identities = 79/143 (55%), Positives = 106/143 (74%), Gaps = 1/143 (0%) Frame = +2 Query: 2 ELGNWVGWVKSRFRCLLLKLEEVQGLCDPNPTVYVDPDLGIPNTVFYWGLQPGRTNFRDA 181 ELG+WVGWVKSRFR LL K+EEVQGLCDPNPT ++DPD G PN VF+WG+QPGR NF D Sbjct: 415 ELGDWVGWVKSRFRFLLAKVEEVQGLCDPNPTEFIDPDAGGPNVVFFWGVQPGRINFSDI 474 Query: 182 GLVEEYFMKHITN-GYQGSIATLELSIVDSAQLPKDTHFDSVNGNASKGYWRMFDCNQHR 358 +VE+ FM++I N GYQG + LS++ ++QLP D+ + N +K WRMF+ +Q R Sbjct: 475 DVVEDDFMQNINNGGYQGPPGKMNLSVIPTSQLPGYAQLDTGSRNRTKACWRMFNYHQPR 534 Query: 359 IPIYSDYLPDYVVGYMAINGDSE 427 +P++S +LP Y VGY A + D++ Sbjct: 535 VPVFSQHLPLYFVGYAATDKDAK 557 >emb|CAN79659.1| hypothetical protein VITISV_014509 [Vitis vinifera] Length = 604 Score = 172 bits (437), Expect = 7e-41 Identities = 79/143 (55%), Positives = 106/143 (74%), Gaps = 1/143 (0%) Frame = +2 Query: 2 ELGNWVGWVKSRFRCLLLKLEEVQGLCDPNPTVYVDPDLGIPNTVFYWGLQPGRTNFRDA 181 ELG+WVGWVKSRFR LL K+EEVQGLCDPNPT ++DPD G PN VF+WG+QPGR NF D Sbjct: 456 ELGDWVGWVKSRFRFLLAKVEEVQGLCDPNPTEFIDPDAGEPNVVFFWGVQPGRINFSDI 515 Query: 182 GLVEEYFMKHITN-GYQGSIATLELSIVDSAQLPKDTHFDSVNGNASKGYWRMFDCNQHR 358 +VE+ FM++I N GYQG + LS++ ++QLP D+ + N +K WRMF+ +Q R Sbjct: 516 DVVEDDFMQNINNGGYQGPPGKMNLSVIPTSQLPGYAXLDTGSRNRTKACWRMFNYHQPR 575 Query: 359 IPIYSDYLPDYVVGYMAINGDSE 427 +P++S +LP Y VGY A + D++ Sbjct: 576 VPVFSQHLPLYFVGYAATDKDAK 598 >ref|XP_002882480.1| polynucleotide adenylyltransferase [Arabidopsis lyrata subsp. lyrata] gi|297328320|gb|EFH58739.1| polynucleotide adenylyltransferase [Arabidopsis lyrata subsp. lyrata] Length = 507 Score = 134 bits (337), Expect = 3e-29 Identities = 68/138 (49%), Positives = 92/138 (66%), Gaps = 4/138 (2%) Frame = +2 Query: 2 ELGNWVGWVKSRFRCLLLKLEEVQGLCDPNPTVYVDPDLGIPNTVFYWGLQPGRTNFRDA 181 +L +WVGWVKSRFRCLL K+EEV G+CDPNPT YV+ PN VFYWGLQ N D Sbjct: 357 DLSDWVGWVKSRFRCLLSKIEEVYGICDPNPTEYVETYTKQPNIVFYWGLQLRTINVSDI 416 Query: 182 GLVEEYFMKHITNG-YQGSIATLELSIVDSAQLPKDTHFDSVNGN--ASKGYWRMFDCNQ 352 VE F+K++ +G +QG + ++LS+V +QLPK+ S N + +K WR+ + Q Sbjct: 417 ESVETEFLKNLNSGSFQGPVGRIQLSVVKESQLPKNGECASNNRSKKVTKTCWRIRENKQ 476 Query: 353 -HRIPIYSDYLPDYVVGY 403 + +P+YS +LP YVVGY Sbjct: 477 CNNVPVYSHHLPGYVVGY 494