BLASTX nr result

ID: Coptis25_contig00014241 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00014241
         (1009 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266544.1| PREDICTED: reticulon-like protein B22 [Vitis...   201   2e-49
ref|XP_002311895.1| predicted protein [Populus trichocarpa] gi|2...   198   2e-48
gb|AFK42356.1| unknown [Medicago truncatula]                          197   3e-48
ref|XP_004164355.1| PREDICTED: reticulon-like protein B22-like [...   193   5e-47
gb|AFK48784.1| unknown [Lotus japonicus]                              193   5e-47

>ref|XP_002266544.1| PREDICTED: reticulon-like protein B22 [Vitis vinifera]
           gi|297735759|emb|CBI18446.3| unnamed protein product
           [Vitis vinifera]
          Length = 160

 Score =  201 bits (512), Expect = 2e-49
 Identities = 99/149 (66%), Positives = 116/149 (77%)
 Frame = +1

Query: 79  PLIVLICGSLVYYHCAFRNXXXXXXXXXXXXXXXXXXAILGMLFRQMNISVPVDPLEWQI 258
           P+IV+ICG+L+YYHCA+RN                  AILG+LFRQ+NISVPVDPLEWQI
Sbjct: 10  PVIVMICGTLIYYHCAYRNSTLLTLVSDVLIVLLCSLAILGLLFRQINISVPVDPLEWQI 69

Query: 259 SQDAANAIIAWFANTVGAAESVLRVAATGHDKRLFLKVVAILYLLSALGRVASGATVAYT 438
           SQD AN I+A  ANT+GAAESVLRVAATGHDKRLF+KVV  LY+LSALGRV SG TVAY 
Sbjct: 70  SQDTANNIVACMANTIGAAESVLRVAATGHDKRLFVKVVVCLYVLSALGRVVSGVTVAYA 129

Query: 439 GLCFFCLYFFAQSSQSLGACTSQFLGRRD 525
           GL  FCLY FA++SQ++ AC S+F+ RRD
Sbjct: 130 GLWLFCLYMFAENSQTICACMSRFMRRRD 158


>ref|XP_002311895.1| predicted protein [Populus trichocarpa] gi|222851715|gb|EEE89262.1|
           predicted protein [Populus trichocarpa]
          Length = 182

 Score =  198 bits (503), Expect = 2e-48
 Identities = 96/146 (65%), Positives = 112/146 (76%)
 Frame = +1

Query: 82  LIVLICGSLVYYHCAFRNXXXXXXXXXXXXXXXXXXAILGMLFRQMNISVPVDPLEWQIS 261
           LI L+ G+LVYYHCA+R+                  AILG+LFRQ+NISVPVDPLEWQIS
Sbjct: 26  LIGLVSGTLVYYHCAYRDSSLFSLMSDVLIVLLCSLAILGLLFRQLNISVPVDPLEWQIS 85

Query: 262 QDAANAIIAWFANTVGAAESVLRVAATGHDKRLFLKVVAILYLLSALGRVASGATVAYTG 441
           QD AN+I+AWFANT+GAAESVLRVAATGHDKRLF KV+  LY+LSALGR+ SG T+AY  
Sbjct: 86  QDTANSIVAWFANTIGAAESVLRVAATGHDKRLFFKVIVCLYVLSALGRLVSGVTIAYAA 145

Query: 442 LCFFCLYFFAQSSQSLGACTSQFLGR 519
           LC FCLY  A++SQS  AC S+FLGR
Sbjct: 146 LCLFCLYMLAENSQSGSACISRFLGR 171


>gb|AFK42356.1| unknown [Medicago truncatula]
          Length = 180

 Score =  197 bits (502), Expect = 3e-48
 Identities = 96/148 (64%), Positives = 111/148 (75%)
 Frame = +1

Query: 82  LIVLICGSLVYYHCAFRNXXXXXXXXXXXXXXXXXXAILGMLFRQMNISVPVDPLEWQIS 261
           +I L+CG+LVYYHCAF+N                  AILG+LFRQM I VPVDPLEWQIS
Sbjct: 23  IIALVCGTLVYYHCAFKNSAIVSLFSDVFIVLLCSLAILGLLFRQMTIQVPVDPLEWQIS 82

Query: 262 QDAANAIIAWFANTVGAAESVLRVAATGHDKRLFLKVVAILYLLSALGRVASGATVAYTG 441
           QD AN I+A FANTVGAAESVLRVAATGHDKRLF KV+  LY LSALGR+A G T+AY G
Sbjct: 83  QDTANTIVASFANTVGAAESVLRVAATGHDKRLFFKVILCLYALSALGRLALGITIAYAG 142

Query: 442 LCFFCLYFFAQSSQSLGACTSQFLGRRD 525
           LC FCLY FA+ SQS+ +C + FLGR++
Sbjct: 143 LCLFCLYMFAECSQSISSCLAWFLGRKN 170


>ref|XP_004164355.1| PREDICTED: reticulon-like protein B22-like [Cucumis sativus]
          Length = 188

 Score =  193 bits (491), Expect = 5e-47
 Identities = 95/156 (60%), Positives = 110/156 (70%)
 Frame = +1

Query: 79  PLIVLICGSLVYYHCAFRNXXXXXXXXXXXXXXXXXXAILGMLFRQMNISVPVDPLEWQI 258
           P + LICGSLVYYHCAFRN                  AILG+LFR MN+SVPVDPLEWQ+
Sbjct: 31  PFVALICGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQV 90

Query: 259 SQDAANAIIAWFANTVGAAESVLRVAATGHDKRLFLKVVAILYLLSALGRVASGATVAYT 438
           SQD AN++IAW ANT+GAAESVLRVAATGHDKRLF+KVV  LY LS LGR+ SG TVAYT
Sbjct: 91  SQDTANSMIAWLANTIGAAESVLRVAATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYT 150

Query: 439 GLCFFCLYFFAQSSQSLGACTSQFLGRRDFGLPMQD 546
           GLC  C+Y   ++S+S+ A  S  L R +     QD
Sbjct: 151 GLCMLCIYMVLENSESISAAISPILRRGNERTSHQD 186


>gb|AFK48784.1| unknown [Lotus japonicus]
          Length = 183

 Score =  193 bits (491), Expect = 5e-47
 Identities = 95/155 (61%), Positives = 112/155 (72%)
 Frame = +1

Query: 82  LIVLICGSLVYYHCAFRNXXXXXXXXXXXXXXXXXXAILGMLFRQMNISVPVDPLEWQIS 261
           +I L+CG+LVYYHCA+RN                  AILG+LFRQMNI VPVDPLEWQIS
Sbjct: 25  IIALVCGTLVYYHCAYRNSTVVSLFSDVFIVLLCSLAILGLLFRQMNIQVPVDPLEWQIS 84

Query: 262 QDAANAIIAWFANTVGAAESVLRVAATGHDKRLFLKVVAILYLLSALGRVASGATVAYTG 441
           QD ANAI+A  ANTVGAAESVLRVAATGHDKRLF KV+  LY+LSA+GR+A G T+AY G
Sbjct: 85  QDTANAIVACLANTVGAAESVLRVAATGHDKRLFFKVILCLYVLSAIGRLALGITIAYAG 144

Query: 442 LCFFCLYFFAQSSQSLGACTSQFLGRRDFGLPMQD 546
           LC FCLY  A+ SQS+ +     +GRR++    QD
Sbjct: 145 LCLFCLYMLAECSQSISSGVGWLVGRRNYASGEQD 179


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