BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00014239
         (764 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269617.1| PREDICTED: ferredoxin-1, chloroplastic-like ...   172   7e-41
gb|AEI83424.1| chloroplast ferredoxin I [Camellia sinensis]           166   4e-39
gb|AFK35324.1| unknown [Lotus japonicus]                              161   2e-37
ref|NP_001234059.1| ferredoxin-1, chloroplastic [Solanum lycoper...   157   3e-36
gb|AFK49089.1| unknown [Lotus japonicus]                              155   7e-36

>ref|XP_002269617.1| PREDICTED: ferredoxin-1, chloroplastic-like [Vitis vinifera]
          Length = 142

 Score =  172 bits (436), Expect = 7e-41
 Identities = 84/137 (61%), Positives = 99/137 (72%)
 Frame = +2

Query: 107 TLSGTMFNTSFVRRQPAMSLRSLPNVGQALFGVKAGRGRITAMASYKVTLITPEGKEEFE 286
           TLSG M +TSF+RRQP  SLR+LPNVGQALFG+KAGRGR+TAMA YKV LITPEG +EFE
Sbjct: 3   TLSGAMVSTSFIRRQPVTSLRALPNVGQALFGLKAGRGRVTAMAVYKVKLITPEGAKEFE 62

Query: 287 CPDDVYILDQAEEVGIDVPYXXXXXXXXXXXXKIVAGAVXXXXXXXXXXXXIGAGFVLTC 466
           CPDDVY+LD AEE+GID+PY            ++V G V            +  G+VLTC
Sbjct: 63  CPDDVYVLDHAEEIGIDLPYSCRAGSCSSCAGRVVEGTVDQSDGSFLEDEQMEEGWVLTC 122

Query: 467 IAYPTSDVTIETHKEEE 517
           +AYP SD+ IETHKEEE
Sbjct: 123 VAYPQSDLVIETHKEEE 139


>gb|AEI83424.1| chloroplast ferredoxin I [Camellia sinensis]
          Length = 147

 Score =  166 bits (421), Expect = 4e-39
 Identities = 87/144 (60%), Positives = 101/144 (70%), Gaps = 2/144 (1%)
 Frame = +2

Query: 92  MAASTTLSGTMFNTSFVRRQ-PAMSLRSLPNVGQALFGVKAGRG-RITAMASYKVTLITP 265
           MA + +LS TM +TSF++RQ P  SLRSLPNVGQALFGVK GRG R+TAMA YKV L+TP
Sbjct: 1   MAMAASLSSTMVSTSFLQRQQPVTSLRSLPNVGQALFGVKGGRGGRVTAMAMYKVKLLTP 60

Query: 266 EGKEEFECPDDVYILDQAEEVGIDVPYXXXXXXXXXXXXKIVAGAVXXXXXXXXXXXXIG 445
           EG +EFECPDDVYILDQAEE+GID+PY            K+  G V            + 
Sbjct: 61  EGPQEFECPDDVYILDQAEEIGIDLPYSCRAGSCSSCAGKLTGGKVDQSDGSFLDDDQMD 120

Query: 446 AGFVLTCIAYPTSDVTIETHKEEE 517
            G+VLTC+AYP SDV IETHKEEE
Sbjct: 121 GGWVLTCVAYPQSDVVIETHKEEE 144


>gb|AFK35324.1| unknown [Lotus japonicus]
          Length = 142

 Score =  161 bits (407), Expect = 2e-37
 Identities = 85/142 (59%), Positives = 95/142 (66%)
 Frame = +2

Query: 92  MAASTTLSGTMFNTSFVRRQPAMSLRSLPNVGQALFGVKAGRGRITAMASYKVTLITPEG 271
           MA +  LSGTM NTSF+RRQP   L++ PNVGQALFG+K+G G    MA+YKV LITPEG
Sbjct: 1   MATTPALSGTMVNTSFLRRQP---LKAFPNVGQALFGLKSGCGGRVTMAAYKVKLITPEG 57

Query: 272 KEEFECPDDVYILDQAEEVGIDVPYXXXXXXXXXXXXKIVAGAVXXXXXXXXXXXXIGAG 451
             EFECPDDVYILD AEE GID+PY            K+V G V            I AG
Sbjct: 58  PFEFECPDDVYILDHAEEQGIDIPYSCRAGSCSSCAGKVVGGNVDQSDGSFLDDDQIDAG 117

Query: 452 FVLTCIAYPTSDVTIETHKEEE 517
           FVLTC+AYP SDV IETHKEEE
Sbjct: 118 FVLTCVAYPQSDVVIETHKEEE 139


>ref|NP_001234059.1| ferredoxin-1, chloroplastic [Solanum lycopersicum]
           gi|3023752|sp|Q43517.1|FER1_SOLLC RecName:
           Full=Ferredoxin-1, chloroplastic; AltName:
           Full=Ferredoxin I; Flags: Precursor
           gi|1418982|emb|CAA99756.1| ferredoxin-I [Solanum
           lycopersicum]
          Length = 144

 Score =  157 bits (396), Expect = 3e-36
 Identities = 83/139 (59%), Positives = 99/139 (71%), Gaps = 2/139 (1%)
 Frame = +2

Query: 107 TLSGTMFNTSFVRRQPAM-SLRSLPNVGQALFGVKAGR-GRITAMASYKVTLITPEGKEE 280
           ++SGTM +TSF+ R+PA+ SL+++ NVG+ALFG+K+GR GRIT MASYKV LITPEG  E
Sbjct: 3   SISGTMISTSFLPRKPAVTSLKAISNVGEALFGLKSGRNGRITCMASYKVKLITPEGPIE 62

Query: 281 FECPDDVYILDQAEEVGIDVPYXXXXXXXXXXXXKIVAGAVXXXXXXXXXXXXIGAGFVL 460
           FECPDDVYILDQAEE G D+PY            K+ AG+V              AGFVL
Sbjct: 63  FECPDDVYILDQAEEEGHDLPYSCRAGSCSSCAGKVTAGSVDQSDGNFLDEDQEAAGFVL 122

Query: 461 TCIAYPTSDVTIETHKEEE 517
           TC+AYP  DVTIETHKEEE
Sbjct: 123 TCVAYPKGDVTIETHKEEE 141


>gb|AFK49089.1| unknown [Lotus japonicus]
          Length = 143

 Score =  155 bits (393), Expect = 7e-36
 Identities = 82/146 (56%), Positives = 94/146 (64%), Gaps = 1/146 (0%)
 Frame = +2

Query: 92  MAASTTLSGTMFNTSFVRRQPAMSLRSLPNVGQALFGVKAG-RGRITAMASYKVTLITPE 268
           MA +   SG   +TSF+RRQP   + + PNVGQ +FGVK G RG    MA+YKV LITPE
Sbjct: 1   MATAPAFSGATVSTSFLRRQP---VAAFPNVGQVMFGVKGGSRGGRVTMAAYKVKLITPE 57

Query: 269 GKEEFECPDDVYILDQAEEVGIDVPYXXXXXXXXXXXXKIVAGAVXXXXXXXXXXXXIGA 448
           G +EFECPDDVYILDQAEEVGID+PY            K+V GAV            +  
Sbjct: 58  GPQEFECPDDVYILDQAEEVGIDIPYSCRAGSCSSCAGKVVEGAVNQSDGSFLDDDQVEG 117

Query: 449 GFVLTCIAYPTSDVTIETHKEEECVG 526
           GFVLTC+AYP SDV IETHKEEE  G
Sbjct: 118 GFVLTCVAYPKSDVVIETHKEEELTG 143