BLASTX nr result

ID: Coptis25_contig00014238 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00014238
         (325 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517213.1| chloride channel clc, putative [Ricinus comm...   109   3e-22
emb|CBI26223.3| unnamed protein product [Vitis vinifera]              108   6e-22
ref|XP_002281606.1| PREDICTED: chloride channel protein CLC-d [V...   108   6e-22
ref|XP_003539246.1| PREDICTED: chloride channel protein CLC-d-li...   104   9e-21
ref|XP_003517583.1| PREDICTED: chloride channel protein CLC-d-li...   104   9e-21

>ref|XP_002517213.1| chloride channel clc, putative [Ricinus communis]
           gi|223543848|gb|EEF45376.1| chloride channel clc,
           putative [Ricinus communis]
          Length = 794

 Score =  109 bits (272), Expect = 3e-22
 Identities = 62/109 (56%), Positives = 69/109 (63%), Gaps = 1/109 (0%)
 Frame = -1

Query: 325 LESRPKYHMRKMTAREACKRQKVVSFPHVVKVADLVSILRNNKHNGFPMSFASSLVSHHK 146
           LES+PKY MR MTAREAC  QKVVSFP V KVAD+VSILR+NKHNGFP            
Sbjct: 566 LESKPKYQMRTMTAREACGNQKVVSFPRVAKVADVVSILRSNKHNGFP------------ 613

Query: 145 KTSFMLFCNACFMFACFQVVDHGQNGEALVIGLIFRSHLLV-LQSKIDF 2
                             V+DH +NGE LVIGL+ RSHLLV LQSK+DF
Sbjct: 614 ------------------VIDHTRNGETLVIGLMLRSHLLVLLQSKVDF 644


>emb|CBI26223.3| unnamed protein product [Vitis vinifera]
          Length = 800

 Score =  108 bits (269), Expect = 6e-22
 Identities = 61/109 (55%), Positives = 71/109 (65%), Gaps = 1/109 (0%)
 Frame = -1

Query: 325 LESRPKYHMRKMTAREACKRQKVVSFPHVVKVADLVSILRNNKHNGFPMSFASSLVSHHK 146
           LESRPKY MRKMTA+EAC  +KVV FP VVKVAD+VSILR+N+HNGFP            
Sbjct: 572 LESRPKYQMRKMTAKEACGNKKVVYFPRVVKVADVVSILRSNEHNGFP------------ 619

Query: 145 KTSFMLFCNACFMFACFQVVDHGQNGEALVIGLIFRSHLLV-LQSKIDF 2
                             V+DH +NGE+LVIGL+ RSHLLV LQSK+DF
Sbjct: 620 ------------------VIDHTRNGESLVIGLMLRSHLLVLLQSKVDF 650


>ref|XP_002281606.1| PREDICTED: chloride channel protein CLC-d [Vitis vinifera]
           gi|301318138|gb|ADK66984.1| chloride channel ClC6 [Vitis
           vinifera]
          Length = 771

 Score =  108 bits (269), Expect = 6e-22
 Identities = 61/109 (55%), Positives = 71/109 (65%), Gaps = 1/109 (0%)
 Frame = -1

Query: 325 LESRPKYHMRKMTAREACKRQKVVSFPHVVKVADLVSILRNNKHNGFPMSFASSLVSHHK 146
           LESRPKY MRKMTA+EAC  +KVV FP VVKVAD+VSILR+N+HNGFP            
Sbjct: 572 LESRPKYQMRKMTAKEACGNKKVVYFPRVVKVADVVSILRSNEHNGFP------------ 619

Query: 145 KTSFMLFCNACFMFACFQVVDHGQNGEALVIGLIFRSHLLV-LQSKIDF 2
                             V+DH +NGE+LVIGL+ RSHLLV LQSK+DF
Sbjct: 620 ------------------VIDHTRNGESLVIGLMLRSHLLVLLQSKVDF 650


>ref|XP_003539246.1| PREDICTED: chloride channel protein CLC-d-like [Glycine max]
          Length = 774

 Score =  104 bits (259), Expect = 9e-21
 Identities = 59/109 (54%), Positives = 69/109 (63%), Gaps = 1/109 (0%)
 Frame = -1

Query: 325 LESRPKYHMRKMTAREACKRQKVVSFPHVVKVADLVSILRNNKHNGFPMSFASSLVSHHK 146
           LESRPKY MR MTA+EAC   +VVSFP VVKV+D+VSILR+NKHNGFP            
Sbjct: 574 LESRPKYEMRNMTAKEACGSGRVVSFPRVVKVSDVVSILRSNKHNGFP------------ 621

Query: 145 KTSFMLFCNACFMFACFQVVDHGQNGEALVIGLIFRSHLLV-LQSKIDF 2
                             V+DH ++GE LVIGL+ RSHLLV LQSK+DF
Sbjct: 622 ------------------VIDHTRSGEPLVIGLVLRSHLLVILQSKVDF 652


>ref|XP_003517583.1| PREDICTED: chloride channel protein CLC-d-like [Glycine max]
          Length = 801

 Score =  104 bits (259), Expect = 9e-21
 Identities = 59/109 (54%), Positives = 69/109 (63%), Gaps = 1/109 (0%)
 Frame = -1

Query: 325 LESRPKYHMRKMTAREACKRQKVVSFPHVVKVADLVSILRNNKHNGFPMSFASSLVSHHK 146
           LESRPKY MR MTA+EAC   +VVSFP VVKV+D+VSILR+NKHNGFP            
Sbjct: 574 LESRPKYEMRNMTAKEACGSGRVVSFPRVVKVSDVVSILRSNKHNGFP------------ 621

Query: 145 KTSFMLFCNACFMFACFQVVDHGQNGEALVIGLIFRSHLLV-LQSKIDF 2
                             V+DH ++GE LVIGL+ RSHLLV LQSK+DF
Sbjct: 622 ------------------VIDHTRSGEPLVIGLVLRSHLLVILQSKVDF 652


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