BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00014228
         (1481 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273726.1| PREDICTED: chromo domain protein LHP1 [Vitis...   222   2e-55
dbj|BAF75819.1| terminal flower 2 protein [Malus x domestica]         215   3e-53
dbj|BAF75818.1| terminal flower 2 protein [Malus x domestica]         213   1e-52
dbj|BAF75821.1| like heterochromatin protein 1 [Malus x domestica]    211   5e-52
ref|XP_002319745.1| chromodomain protein [Populus trichocarpa] g...   204   6e-50

>ref|XP_002273726.1| PREDICTED: chromo domain protein LHP1 [Vitis vinifera]
            gi|296090196|emb|CBI40015.3| unnamed protein product
            [Vitis vinifera]
          Length = 424

 Score =  222 bits (565), Expect = 2e-55
 Identities = 147/375 (39%), Positives = 195/375 (52%), Gaps = 6/375 (1%)
 Frame = +1

Query: 1    RRKRIRKGKVQYLIKWRGWPEAANTWEPVENLLSCIDIIDAFE------RTXXXXXXXXX 162
            RR+R+RKG++QYLIKWRGWPE ANTWEP+ENL +C D+IDAFE      R          
Sbjct: 102  RRRRVRKGQLQYLIKWRGWPENANTWEPLENLQACSDVIDAFEDRLRSKRNRSSRKRKRK 161

Query: 163  XQGNSIPQPKKKQQRSVSTSPSAKVNYNKFTHLGFTSPHPIPHDGVEEGKSAESSGNVDR 342
              G++   PKKKQQRS +++           HL  T  + + H  +E    A ++  + +
Sbjct: 162  SGGSAQTLPKKKQQRSGASNVRGVHFRINDEHLLSTHVNTLGHADIEGVNGAVNNVEMTK 221

Query: 343  ELSYGNVGPNNAGHVGKELCYSNRGPNYAGDVDKEMDYAHAGTTDHLAENGDTHICLEKS 522
            E +                                             ENG   + L+  
Sbjct: 222  ESN---------------------------------------------ENGSGDVSLQIP 236

Query: 523  QSEEVNVADPHSGELNGVLTHRLDDGNFSIQVPDTRSSGKDGDADEQSKSGFPGNVQSSR 702
            Q EE N +DP   EL G  ++  +   F IQ  + ++   D   +  SK       QSSR
Sbjct: 237  QREEDNDSDPKLIELRG--SNEGNANKFKIQFQEVKALEGDCPMNGHSKVERVEMDQSSR 294

Query: 703  SIGAKRRKSGSVKRFKMDSASNKLNGDQNQNSGSAFGSGHQSQAPVGEDADSSGDNARDG 882
              GA+RRKSGSVKRF  D A  + N  QN  +    GS  + ++P     DS  +N  DG
Sbjct: 295  RTGARRRKSGSVKRFTKDLAPCEPNDIQNTATRIQIGSCGRVESPEFPGNDSGLNNKFDG 354

Query: 883  DRLEDAVDPSTIVKIIRPLSYLTSISNNVQDVSVTFQALRFDGRETVVDNKFLKANNPLM 1062
                 A++ S I +II+P+SY  SISN+ QDVSVTF A+R DG+E +VDNKFLKANNPL+
Sbjct: 355  -----AINMSAITEIIKPISYSASISNDAQDVSVTFMAMRSDGKEVMVDNKFLKANNPLL 409

Query: 1063 LINFYEQHVRYSPPT 1107
            LINFYEQH+RYSP T
Sbjct: 410  LINFYEQHLRYSPTT 424


>dbj|BAF75819.1| terminal flower 2 protein [Malus x domestica]
          Length = 456

 Score =  215 bits (547), Expect = 3e-53
 Identities = 139/377 (36%), Positives = 198/377 (52%), Gaps = 10/377 (2%)
 Frame = +1

Query: 1    RRKRIRKGKVQYLIKWRGWPEAANTWEPVENLLSCIDIIDAFERT--XXXXXXXXXXQGN 174
            RRKR+RKG++QYLIKWRGWPE ANTWEP++NL S  D+++AFE +            QG 
Sbjct: 113  RRKRVRKGQLQYLIKWRGWPETANTWEPLDNLQSIADVVEAFEESLRTGKHRKRKRKQGT 172

Query: 175  SIPQPKKKQQRSVSTSPSAKVNYNKFTHLGFTSPHPIPHDGVEEGKSAESSGNVDRELSY 354
             + QPKK+QQRS                   + P PI         +    G VD+ LS 
Sbjct: 173  PLSQPKKRQQRS-------------------SDPIPI------YNMTDVEIGIVDKALS- 206

Query: 355  GNVGPNNAGHVGKE-------LCYSNRGPNYAGDVDKEMDYAHAGTTDHLAENGDTHICL 513
             +   N +  VG         L        +A +++         T    AENG ++   
Sbjct: 207  -STALNCSKLVGLPPPQQPVVLARDGENDGHANNIE--------ATKKVNAENGCSNTSQ 257

Query: 514  EKSQSEEVNVADPHSGELNG-VLTHRLDDGNFSIQVPDTRSSGKDGDADEQSKSGFPGNV 690
            +     E N  DP   EL     T+ ++    S+   + R+   +G  D  SK      V
Sbjct: 258  QNGGRREENEDDPKLSELRATTFTNVVNWDKVSVPFQEARAPEVNGPTDGLSKVDCAEPV 317

Query: 691  QSSRSIGAKRRKSGSVKRFKMDSASNKLNGDQNQNSGSAFGSGHQSQAPVGEDADSSGDN 870
            QS+RS GAKRRKS SVKRFK +S  ++L    N  +  +   G +      E+ D +G N
Sbjct: 318  QSNRSTGAKRRKSSSVKRFKQESQVSELGATPNATTRVSVRYGGRGSQSGAENLDYAGGN 377

Query: 871  ARDGDRLEDAVDPSTIVKIIRPLSYLTSISNNVQDVSVTFQALRFDGRETVVDNKFLKAN 1050
            +   ++++++ +   I KII+P+ Y TS+SN+VQDV VTF+A+R DG E +VDNK LK N
Sbjct: 378  SSRRNKIDESRNAVRITKIIKPIGYSTSVSNDVQDVLVTFKAMRSDGSEVIVDNKSLKVN 437

Query: 1051 NPLMLINFYEQHVRYSP 1101
            +PL+LI+FYEQH+RY+P
Sbjct: 438  HPLLLIDFYEQHLRYNP 454


>dbj|BAF75818.1| terminal flower 2 protein [Malus x domestica]
          Length = 456

 Score =  213 bits (541), Expect = 1e-52
 Identities = 137/387 (35%), Positives = 197/387 (50%), Gaps = 20/387 (5%)
 Frame = +1

Query: 1    RRKRIRKGKVQYLIKWRGWPEAANTWEPVENLLSCIDIIDAFERT--XXXXXXXXXXQGN 174
            RRKR+RKG++QYLIKWRGWPE ANTWEP++NL S  D+++AFE +            QG 
Sbjct: 113  RRKRVRKGQLQYLIKWRGWPETANTWEPLDNLQSIADVVEAFEESLRTGKHRKRKRKQGT 172

Query: 175  SIPQPKKKQQRSVSTSP-----------------SAKVNYNKFTHLGFTSPHPIPHDGVE 303
             + QPKK+QQRS    P                 S  +N +K   L      P P   V 
Sbjct: 173  PLSQPKKRQQRSSDPIPIYNMTDVEIGIVDKALSSTALNCSKLVGL------PPPQQPVV 226

Query: 304  EGKSAESSGNVDRELSYGNVGPNNAGHVGKELCYSNRGPNYAGDVDKEMDYAHAGTTDHL 483
              +  E+ G+V           NN                   +  K+++          
Sbjct: 227  LARDGENDGHV-----------NNI------------------EATKKVN---------- 247

Query: 484  AENGDTHICLEKSQSEEVNVADPHSGELNG-VLTHRLDDGNFSIQVPDTRSSGKDGDADE 660
             ENG ++   +     E N  DP   EL     T+ ++    S+   + ++   +G  D 
Sbjct: 248  VENGCSNTSQQNGGRREENEDDPKLSELRATTFTNVVNWDKVSVPFQEAKAPEVNGPTDG 307

Query: 661  QSKSGFPGNVQSSRSIGAKRRKSGSVKRFKMDSASNKLNGDQNQNSGSAFGSGHQSQAPV 840
             SK      VQS+RS GAKRRKS SVKRFK +S  ++L    N  +  +   G +     
Sbjct: 308  LSKVDCAEPVQSNRSTGAKRRKSSSVKRFKQESQVSELGATPNATTRVSVRYGGRGSQSG 367

Query: 841  GEDADSSGDNARDGDRLEDAVDPSTIVKIIRPLSYLTSISNNVQDVSVTFQALRFDGRET 1020
             E+ D +G N+   ++++++ +   I KII+P+ Y TS+SN+VQDV VTF+A+R DG E 
Sbjct: 368  AENLDYAGGNSSRRNKIDESRNAVRITKIIKPIGYSTSVSNDVQDVLVTFKAMRSDGSEV 427

Query: 1021 VVDNKFLKANNPLMLINFYEQHVRYSP 1101
            +VDNK LK N+PL+LI+FYEQH+RY+P
Sbjct: 428  IVDNKSLKVNHPLLLIDFYEQHLRYNP 454


>dbj|BAF75821.1| like heterochromatin protein 1 [Malus x domestica]
          Length = 453

 Score =  211 bits (536), Expect = 5e-52
 Identities = 140/370 (37%), Positives = 196/370 (52%), Gaps = 4/370 (1%)
 Frame = +1

Query: 1    RRKRIRKGKVQYLIKWRGWPEAANTWEPVENLLSCIDIIDAFERT--XXXXXXXXXXQGN 174
            RRKR+RKG++QYLIKWRGWPE ANTWEP++NL S  D+++AFE +            QG 
Sbjct: 114  RRKRVRKGQLQYLIKWRGWPETANTWEPLDNLQSIADVVEAFEESLRTGKHRKRKRKQGT 173

Query: 175  SIPQPKKKQQRSVSTSPSAKVNYNKF-THLGFTSPHPIPHDGVEEGKSAESSGNVDRELS 351
             + QPKK+QQR  ST P     YN     +G         D      +   S  VD    
Sbjct: 174  PLSQPKKRQQR--STDPI----YNMTDVEIGIV-------DKALSSTALNCSKLVDLLPP 220

Query: 352  YGNVGPNNAGHVGKELCYSNRGPNYAGDVDKEMDYAHAGTTDHLAENGDTHICLEKSQSE 531
               VG    G  G             G+V+     A        AENG ++I  +  +  
Sbjct: 221  QQPVGLARVGENG-------------GNVNNTETTAKVN-----AENGCSNISQQNGERR 262

Query: 532  EVNVADPHSGELNG-VLTHRLDDGNFSIQVPDTRSSGKDGDADEQSKSGFPGNVQSSRSI 708
            E N  DP   EL     T+ ++    S+   + R+   +G  D  SK      VQS+R  
Sbjct: 263  EENEYDPKLSELKATTFTNVVNLDKLSVPFQEGRAPEVNGPTDGLSKIDCTETVQSNR-- 320

Query: 709  GAKRRKSGSVKRFKMDSASNKLNGDQNQNSGSAFGSGHQSQAPVGEDADSSGDNARDGDR 888
            GAKRRKSGSVKRFK ++  ++L    N  +  +   G +      E+ D +G N+   ++
Sbjct: 321  GAKRRKSGSVKRFKQETQVSELGATTNATTRVSVRYGSRVNQSGAENLDYAGGNSSRRNK 380

Query: 889  LEDAVDPSTIVKIIRPLSYLTSISNNVQDVSVTFQALRFDGRETVVDNKFLKANNPLMLI 1068
            ++++ +   I KII+P+ Y TS+SN+VQDV VTF+A+R DG E +VDNK LK N+PL+LI
Sbjct: 381  IDESRNAVRITKIIKPIGYSTSVSNDVQDVLVTFKAMRSDGSEVIVDNKSLKVNHPLLLI 440

Query: 1069 NFYEQHVRYS 1098
            +FYEQH+RY+
Sbjct: 441  DFYEQHLRYN 450


>ref|XP_002319745.1| chromodomain protein [Populus trichocarpa]
            gi|222858121|gb|EEE95668.1| chromodomain protein [Populus
            trichocarpa]
          Length = 438

 Score =  204 bits (518), Expect = 6e-50
 Identities = 139/384 (36%), Positives = 193/384 (50%), Gaps = 18/384 (4%)
 Frame = +1

Query: 1    RRKRIRKGKVQYLIKWRGWPEAANTWEPVENLLSCIDIIDAFE---RTXXXXXXXXXXQG 171
            RRKR+RKG++QYLIKWRGWPE ANTWEP+ENL SC D+IDAFE   R+           G
Sbjct: 100  RRKRVRKGQLQYLIKWRGWPETANTWEPLENLQSCSDVIDAFEESLRSGRSSRKRKRKHG 159

Query: 172  NSIPQPKKKQQRSVSTS--------------PSAKVNYNKFTHLGFTSPHPIPHDGVEEG 309
                  KKKQ RS +                PSA +N +    L      P P   +  G
Sbjct: 160  APHTPSKKKQPRSSAVYNVMDVEVSIADKHLPSAPLNNSLLADL------PSPSQFIGLG 213

Query: 310  KSAESSGNVDRELSYGNVGPNNAGHVGKELCYSNRGPNYAGDVDKEMDYAHAGTTDHLAE 489
               ESSG+V+      N+  +                                T ++ + 
Sbjct: 214  HGGESSGDVN------NIKTSKQ------------------------------TDENGSI 237

Query: 490  NGDTHICLEKSQSEEVNVADPHSGELNGVLTH-RLDDGNFSIQVPDTRSSGKDGDADEQS 666
            NG  HI   K  +E     DP   EL G + +  ++   F+I   + ++S  +G A+   
Sbjct: 238  NGSKHIFERKEDNEY----DPKLSELIGTIPNIDVNTNKFTIHFQEEKASEDNGIANGLP 293

Query: 667  KSGFPGNVQSSRSIGAKRRKSGSVKRFKMDSASNKLNGDQNQNSGSAFGSGHQSQAPVGE 846
            K  +   VQ+SR  GAK+RKSGSVKRFK DS   +     N +   + GS   +  P  E
Sbjct: 294  KVDYVDLVQNSRCTGAKKRKSGSVKRFKKDSVMCEPVFLPNSSGNFSVGSTGAAAQPGIE 353

Query: 847  DADSSGDNARDGDRLEDAVDPSTIVKIIRPLSYLTSISNNVQDVSVTFQALRFDGRETVV 1026
            +   +  N+       ++++   I KI++P+ +  S+ +NVQDV +TF+ALR DG+E  V
Sbjct: 354  NPSLTWGNSSHMPMTGNSINAFAITKILKPIGFSASVFDNVQDVLITFRALRSDGQEVTV 413

Query: 1027 DNKFLKANNPLMLINFYEQHVRYS 1098
            DNKFLKANNP +LINFYEQH++YS
Sbjct: 414  DNKFLKANNPHLLINFYEQHLKYS 437