BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00014220
         (1413 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268905.1| PREDICTED: probable ATP-dependent RNA helica...   386   e-105
emb|CBI36896.3| unnamed protein product [Vitis vinifera]              356   9e-96
ref|XP_004136163.1| PREDICTED: probable ATP-dependent RNA helica...   332   2e-88
ref|XP_004162448.1| PREDICTED: LOW QUALITY PROTEIN: probable ATP...   329   9e-88
ref|XP_002523130.1| ATP-dependent RNA helicase, putative [Ricinu...   318   2e-84

>ref|XP_002268905.1| PREDICTED: probable ATP-dependent RNA helicase DHX37-like [Vitis
            vinifera]
          Length = 1414

 Score =  386 bits (991), Expect = e-105
 Identities = 186/250 (74%), Positives = 209/250 (83%), Gaps = 1/250 (0%)
 Frame = -3

Query: 1411 GQAICAGWADRVARHDRVVSGSTDGDRKANAVRYQACMVKETVFLHRWSSVARSSPEFLV 1232
            GQAICAGWADRVA+  R +SGS++GDRKA A RYQACMVKETVFLHRWSS+ARS+PEFLV
Sbjct: 1158 GQAICAGWADRVAKRTRAISGSSEGDRKAKAARYQACMVKETVFLHRWSSLARSAPEFLV 1217

Query: 1231 YSELLQTKRPYMHGVTSVKADWLVKYAGSLCTFTR-LTDPKPYYDPLTDQVLCWARPLFG 1055
            YSELLQTKRPYMHGVT+VK DWLVKYA  LC+F+  LTDPKPYY+PL DQV CW  P FG
Sbjct: 1218 YSELLQTKRPYMHGVTNVKPDWLVKYAAPLCSFSAPLTDPKPYYEPLADQVFCWVIPTFG 1277

Query: 1054 PHLWELPLHTLPIKSDDHQRVAAFACALLEGQVLPCLRSVQQFLAAPPASILRAESLGQR 875
            PHLW LPLH +PI SD+ QRV+ FA ALLEGQVLPCL SV++++AAPPASILR E+LGQR
Sbjct: 1278 PHLWRLPLHGVPI-SDNAQRVSVFAYALLEGQVLPCLGSVRKYMAAPPASILRPEALGQR 1336

Query: 874  RVGNLLNKLGGRSKKIDSRAMLKETWNDNPHELQSEILDWFQERLRDRFEELWKQMHREV 695
            RVGNLL+KL  R K IDS  ML+E W +NP EL SEILDWFQE    +FE LW QMH EV
Sbjct: 1337 RVGNLLSKLKSRPKTIDSCLMLREAWRENPRELHSEILDWFQETFHKQFEVLWSQMHLEV 1396

Query: 694  LLDPQELYPK 665
            LLDPQE +PK
Sbjct: 1397 LLDPQERFPK 1406


>emb|CBI36896.3| unnamed protein product [Vitis vinifera]
          Length = 1098

 Score =  356 bits (913), Expect = 9e-96
 Identities = 172/232 (74%), Positives = 194/232 (83%), Gaps = 1/232 (0%)
 Frame = -3

Query: 1357 VSGSTDGDRKANAVRYQACMVKETVFLHRWSSVARSSPEFLVYSELLQTKRPYMHGVTSV 1178
            +SGS++GDRKA A RYQACMVKETVFLHRWSS+ARS+PEFLVYSELLQTKRPYMHGVT+V
Sbjct: 860  ISGSSEGDRKAKAARYQACMVKETVFLHRWSSLARSAPEFLVYSELLQTKRPYMHGVTNV 919

Query: 1177 KADWLVKYAGSLCTFTR-LTDPKPYYDPLTDQVLCWARPLFGPHLWELPLHTLPIKSDDH 1001
            K DWLVKYA  LC+F+  LTDPKPYY+PL DQV CW  P FGPHLW LPLH +PI SD+ 
Sbjct: 920  KPDWLVKYAAPLCSFSAPLTDPKPYYEPLADQVFCWVIPTFGPHLWRLPLHGVPI-SDNA 978

Query: 1000 QRVAAFACALLEGQVLPCLRSVQQFLAAPPASILRAESLGQRRVGNLLNKLGGRSKKIDS 821
            QRV+ FA ALLEGQVLPCL SV++++AAPPASILR E+LGQRRVGNLL+KL  R K IDS
Sbjct: 979  QRVSVFAYALLEGQVLPCLGSVRKYMAAPPASILRPEALGQRRVGNLLSKLKSRPKTIDS 1038

Query: 820  RAMLKETWNDNPHELQSEILDWFQERLRDRFEELWKQMHREVLLDPQELYPK 665
              ML+E W +NP EL SEILDWFQE    +FE LW QMH EVLLDPQE +PK
Sbjct: 1039 CLMLREAWRENPRELHSEILDWFQETFHKQFEVLWSQMHLEVLLDPQERFPK 1090


>ref|XP_004136163.1| PREDICTED: probable ATP-dependent RNA helicase DHX37-like [Cucumis
            sativus]
          Length = 1333

 Score =  332 bits (850), Expect = 2e-88
 Identities = 165/250 (66%), Positives = 194/250 (77%), Gaps = 1/250 (0%)
 Frame = -3

Query: 1411 GQAICAGWADRVARHDRVVSGSTDGDRKANAVRYQACMVKETVFLHRWSSVARSSPEFLV 1232
            GQAICAGW DRVA+  R +S S + DRK  A +YQACMVKE VF++RWSSV+RS+P+FLV
Sbjct: 1076 GQAICAGWPDRVAKRIREISKSVEADRKERAGKYQACMVKENVFVNRWSSVSRSAPKFLV 1135

Query: 1231 YSELLQTKRPYMHGVTSVKADWLVKYAGSLCTFTR-LTDPKPYYDPLTDQVLCWARPLFG 1055
            Y+ELL+TKRPYMHG+TSV+ DWLVKYA SLC F+  LTDPKPYYD   D V  W  P FG
Sbjct: 1136 YNELLRTKRPYMHGLTSVQPDWLVKYASSLCAFSAPLTDPKPYYDSQNDTVYSWVAPTFG 1195

Query: 1054 PHLWELPLHTLPIKSDDHQRVAAFACALLEGQVLPCLRSVQQFLAAPPASILRAESLGQR 875
            PHLWELPLH +PIK D+ Q VA FACALL+G+VLPCL SV +FLAA P+SILR E+LGQ+
Sbjct: 1196 PHLWELPLHNVPIK-DNAQGVAVFACALLKGKVLPCLTSVSEFLAARPSSILRPEALGQK 1254

Query: 874  RVGNLLNKLGGRSKKIDSRAMLKETWNDNPHELQSEILDWFQERLRDRFEELWKQMHREV 695
            RVGNLL+KL  RSKKI+SRA L+  W DNP+EL  EILDWFQ+     FE+LW QM  EV
Sbjct: 1255 RVGNLLSKL--RSKKINSRATLRAVWKDNPYELHLEILDWFQKSYHSHFEDLWSQMLCEV 1312

Query: 694  LLDPQELYPK 665
             L  + L  K
Sbjct: 1313 QLPQKRLIKK 1322


>ref|XP_004162448.1| PREDICTED: LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase
            DHX37-like [Cucumis sativus]
          Length = 1333

 Score =  329 bits (844), Expect = 9e-88
 Identities = 164/250 (65%), Positives = 193/250 (77%), Gaps = 1/250 (0%)
 Frame = -3

Query: 1411 GQAICAGWADRVARHDRVVSGSTDGDRKANAVRYQACMVKETVFLHRWSSVARSSPEFLV 1232
            GQAICAGW DRVA+  R +S S + DRK  A +YQACMVKE VF++RWSSV+RS+P+FLV
Sbjct: 1076 GQAICAGWPDRVAKRIREISKSVEADRKERAGKYQACMVKENVFVNRWSSVSRSAPKFLV 1135

Query: 1231 YSELLQTKRPYMHGVTSVKADWLVKYAGSLCTFTR-LTDPKPYYDPLTDQVLCWARPLFG 1055
            Y+ELL+TKRPYMHG+TSV+ DWLVKYA SLC F+  LTDPKPYYD   D V  W  P FG
Sbjct: 1136 YNELLRTKRPYMHGLTSVQPDWLVKYASSLCAFSAPLTDPKPYYDSQNDTVYSWVAPTFG 1195

Query: 1054 PHLWELPLHTLPIKSDDHQRVAAFACALLEGQVLPCLRSVQQFLAAPPASILRAESLGQR 875
            PHLWELPLH +PIK D+ Q VA FACALL+G+VLPCL SV +FLAA P+SILR E+LG +
Sbjct: 1196 PHLWELPLHNVPIK-DNAQGVAVFACALLKGKVLPCLTSVSEFLAARPSSILRPEALGXK 1254

Query: 874  RVGNLLNKLGGRSKKIDSRAMLKETWNDNPHELQSEILDWFQERLRDRFEELWKQMHREV 695
            RVGNLL+KL  RSKKI+SRA L+  W DNP+EL  EILDWFQ+     FE+LW QM  EV
Sbjct: 1255 RVGNLLSKL--RSKKINSRATLRAVWKDNPYELHLEILDWFQKSYHSHFEDLWSQMLCEV 1312

Query: 694  LLDPQELYPK 665
             L  + L  K
Sbjct: 1313 QLPQKRLIKK 1322


>ref|XP_002523130.1| ATP-dependent RNA helicase, putative [Ricinus communis]
            gi|223537692|gb|EEF39315.1| ATP-dependent RNA helicase,
            putative [Ricinus communis]
          Length = 868

 Score =  318 bits (816), Expect = 2e-84
 Identities = 155/248 (62%), Positives = 187/248 (75%)
 Frame = -3

Query: 1408 QAICAGWADRVARHDRVVSGSTDGDRKANAVRYQACMVKETVFLHRWSSVARSSPEFLVY 1229
            QAICAGWADR+A+  R  S S++GDR+ N+VRYQAC VKE VFLHRWS ++ S PEFLVY
Sbjct: 623  QAICAGWADRIAKRIRGDSKSSEGDRRVNSVRYQACKVKEDVFLHRWSYLSSSPPEFLVY 682

Query: 1228 SELLQTKRPYMHGVTSVKADWLVKYAGSLCTFTRLTDPKPYYDPLTDQVLCWARPLFGPH 1049
            SELL TKRPY+HG TSVK +W+VKYAGSLC  + + DPKPYY+P TDQV CW RP F PH
Sbjct: 683  SELLHTKRPYIHGATSVKPEWIVKYAGSLCRLSTVEDPKPYYEPETDQVYCWLRPTFKPH 742

Query: 1048 LWELPLHTLPIKSDDHQRVAAFACALLEGQVLPCLRSVQQFLAAPPASILRAESLGQRRV 869
            LW+LPL +LPI S+D  RV  FACALLEGQVLPCLR  ++ +AA P+ IL  E+ G+ RV
Sbjct: 743  LWQLPLCSLPI-SNDIDRVKVFACALLEGQVLPCLRPCREHMAARPSIILNQEAAGESRV 801

Query: 868  GNLLNKLGGRSKKIDSRAMLKETWNDNPHELQSEILDWFQERLRDRFEELWKQMHREVLL 689
            GNLL KL   +K +DS AML+E W  NP EL SEIL WF++    +F ELW +MH EV L
Sbjct: 802  GNLLYKL--NTKFVDSCAMLRELWKQNPDELHSEILHWFKKTYYSKFGELWSRMHIEVQL 859

Query: 688  DPQELYPK 665
            +P E + K
Sbjct: 860  EPHERFSK 867