BLASTX nr result

ID: Coptis25_contig00014207 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00014207
         (1530 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17911.3| unnamed protein product [Vitis vinifera]              543   e-152
ref|XP_002263886.1| PREDICTED: APO protein 3, mitochondrial-like...   543   e-152
ref|XP_003537145.1| PREDICTED: APO protein 3, mitochondrial-like...   505   e-140
ref|XP_002518315.1| APO protein 3, mitochondrial precursor, puta...   504   e-140
ref|XP_003518143.1| PREDICTED: LOW QUALITY PROTEIN: APO protein ...   486   e-135

>emb|CBI17911.3| unnamed protein product [Vitis vinifera]
          Length = 454

 Score =  543 bits (1398), Expect = e-152
 Identities = 271/415 (65%), Positives = 324/415 (78%)
 Frame = +1

Query: 64   QVVEKMLSRRIGKVVSSRDVVIQSIVVKFGGIWKGWCPQVSFSSALSDASKCVELPKKLK 243
            ++V +ML RRI  +   R +V+Q+       + K   P  SFS+     S C ELP+KLK
Sbjct: 48   ELVRRMLPRRIRNL---RKIVVQNSFASLIELGKFKLPFRSFSTN----STCKELPRKLK 100

Query: 244  KSERKPLVTGINVLKRRARLEKKIRQEVRETVPKPPENGLLVEKLIPVAHDVYNARSMLF 423
            KSERKP VT +N LK +ARL+K+ RQEV E   +PPENGLLV+ L+P AH+VY AR+ LF
Sbjct: 101  KSERKPWVTSVNELKCKARLQKQARQEVSEITLRPPENGLLVKGLVPFAHEVYAARAKLF 160

Query: 424  TCVSKVMKSIPVYTCGLCGEVHVGLRPNKIKSCIVPGNPSRKEHRWEKASVEHVLPLVES 603
            TCVS V+KS  +Y+C LCGEVHVG  P+KI++C V G+P+ KEH WE   VEHVLPLVES
Sbjct: 161  TCVSMVVKSTIIYSCRLCGEVHVGHPPHKIRTCNVTGSPASKEHVWEIGGVEHVLPLVES 220

Query: 604  FHLYDRVGRAVSHGECLEVDRIPAIVELCVQAGLDIPEYPTRRRTIPVYIVAGKIKDFEK 783
            FHLYDR+GRAVSH E L+VD+IPAIVELC+QAGLDIPEYPTRRRT PVY VAG++ DFE+
Sbjct: 221  FHLYDRLGRAVSHNERLQVDQIPAIVELCIQAGLDIPEYPTRRRTFPVYNVAGRMIDFER 280

Query: 784  RFPQFDSSGNDINEFGFWEKHEKPGRENKSLDLPLDDLQGVAVQGMKAWEKMRSGTLKLI 963
            RFP++DS G DIN +GFWEK  +   ENKS+ L  DD+QG A+QGM+AWEKM  G  KL+
Sbjct: 281  RFPKYDSPGKDINAYGFWEKRNQ-SSENKSMHLLADDVQGFAIQGMEAWEKMWLGASKLM 339

Query: 964  QKYAVQTCGYCPEVQVGPKGHRVRQCQAFKHQMRDGQHAWQEATFDDLVPPVYVWHVQDA 1143
            QKYAVQTCGYC EVQVGPKGHRVR CQA+KHQMRDGQHAWQEAT DDL+PPV+VWHV+D 
Sbjct: 340  QKYAVQTCGYCSEVQVGPKGHRVRNCQAYKHQMRDGQHAWQEATVDDLIPPVHVWHVRDV 399

Query: 1144 NGSNPVLDQLKRYYGKLPAVVELFAQAGAQVGEHYSNVMRGDVAVPALHEEKLVV 1308
                P+++ L+RYYGKLPAVVELFAQAGA VGE+Y  +MR DVAVP L EEK VV
Sbjct: 400  QDGGPLVNGLQRYYGKLPAVVELFAQAGANVGENYVAMMREDVAVPGLDEEKWVV 454


>ref|XP_002263886.1| PREDICTED: APO protein 3, mitochondrial-like [Vitis vinifera]
          Length = 481

 Score =  543 bits (1398), Expect = e-152
 Identities = 271/415 (65%), Positives = 324/415 (78%)
 Frame = +1

Query: 64   QVVEKMLSRRIGKVVSSRDVVIQSIVVKFGGIWKGWCPQVSFSSALSDASKCVELPKKLK 243
            ++V +ML RRI  +   R +V+Q+       + K   P  SFS+     S C ELP+KLK
Sbjct: 75   ELVRRMLPRRIRNL---RKIVVQNSFASLIELGKFKLPFRSFSTN----STCKELPRKLK 127

Query: 244  KSERKPLVTGINVLKRRARLEKKIRQEVRETVPKPPENGLLVEKLIPVAHDVYNARSMLF 423
            KSERKP VT +N LK +ARL+K+ RQEV E   +PPENGLLV+ L+P AH+VY AR+ LF
Sbjct: 128  KSERKPWVTSVNELKCKARLQKQARQEVSEITLRPPENGLLVKGLVPFAHEVYAARAKLF 187

Query: 424  TCVSKVMKSIPVYTCGLCGEVHVGLRPNKIKSCIVPGNPSRKEHRWEKASVEHVLPLVES 603
            TCVS V+KS  +Y+C LCGEVHVG  P+KI++C V G+P+ KEH WE   VEHVLPLVES
Sbjct: 188  TCVSMVVKSTIIYSCRLCGEVHVGHPPHKIRTCNVTGSPASKEHVWEIGGVEHVLPLVES 247

Query: 604  FHLYDRVGRAVSHGECLEVDRIPAIVELCVQAGLDIPEYPTRRRTIPVYIVAGKIKDFEK 783
            FHLYDR+GRAVSH E L+VD+IPAIVELC+QAGLDIPEYPTRRRT PVY VAG++ DFE+
Sbjct: 248  FHLYDRLGRAVSHNERLQVDQIPAIVELCIQAGLDIPEYPTRRRTFPVYNVAGRMIDFER 307

Query: 784  RFPQFDSSGNDINEFGFWEKHEKPGRENKSLDLPLDDLQGVAVQGMKAWEKMRSGTLKLI 963
            RFP++DS G DIN +GFWEK  +   ENKS+ L  DD+QG A+QGM+AWEKM  G  KL+
Sbjct: 308  RFPKYDSPGKDINAYGFWEKRNQ-SSENKSMHLLADDVQGFAIQGMEAWEKMWLGASKLM 366

Query: 964  QKYAVQTCGYCPEVQVGPKGHRVRQCQAFKHQMRDGQHAWQEATFDDLVPPVYVWHVQDA 1143
            QKYAVQTCGYC EVQVGPKGHRVR CQA+KHQMRDGQHAWQEAT DDL+PPV+VWHV+D 
Sbjct: 367  QKYAVQTCGYCSEVQVGPKGHRVRNCQAYKHQMRDGQHAWQEATVDDLIPPVHVWHVRDV 426

Query: 1144 NGSNPVLDQLKRYYGKLPAVVELFAQAGAQVGEHYSNVMRGDVAVPALHEEKLVV 1308
                P+++ L+RYYGKLPAVVELFAQAGA VGE+Y  +MR DVAVP L EEK VV
Sbjct: 427  QDGGPLVNGLQRYYGKLPAVVELFAQAGANVGENYVAMMREDVAVPGLDEEKWVV 481


>ref|XP_003537145.1| PREDICTED: APO protein 3, mitochondrial-like [Glycine max]
          Length = 404

 Score =  505 bits (1301), Expect = e-140
 Identities = 252/410 (61%), Positives = 301/410 (73%)
 Frame = +1

Query: 79   MLSRRIGKVVSSRDVVIQSIVVKFGGIWKGWCPQVSFSSALSDASKCVELPKKLKKSERK 258
            ML R +  + S  + V+Q  V +  GI         F    S  S C ELP+KL K ERK
Sbjct: 1    MLPRHVQTIGSLLERVMQVHVAQLRGI------NTHFCLWYSSVSTCNELPRKLNKYERK 54

Query: 259  PLVTGINVLKRRARLEKKIRQEVRETVPKPPENGLLVEKLIPVAHDVYNARSMLFTCVSK 438
            P VT  N LKR+ARLE+K RQ+V E   +PPENGLLVE LIP+AH+VY AR  L + VS+
Sbjct: 55   PPVTSFNELKRQARLERKERQKVHENKLQPPENGLLVEHLIPIAHEVYAARCELISTVSR 114

Query: 439  VMKSIPVYTCGLCGEVHVGLRPNKIKSCIVPGNPSRKEHRWEKASVEHVLPLVESFHLYD 618
            ++  I +YTC LCGEVHVG  P++I++C V G+PS KEH W K  VEHVLPLVESFHLYD
Sbjct: 115  LVNYIAIYTCSLCGEVHVGHPPHQIRTCDVRGSPSSKEHSWVKGGVEHVLPLVESFHLYD 174

Query: 619  RVGRAVSHGECLEVDRIPAIVELCVQAGLDIPEYPTRRRTIPVYIVAGKIKDFEKRFPQF 798
            R+GRAVSH E LEVDRIPAIVELC+QAG DIPEYPTRRR+ PVY VAG+I DFEKRFP+ 
Sbjct: 175  RIGRAVSHNEMLEVDRIPAIVELCIQAGFDIPEYPTRRRSFPVYCVAGRIIDFEKRFPKE 234

Query: 799  DSSGNDINEFGFWEKHEKPGRENKSLDLPLDDLQGVAVQGMKAWEKMRSGTLKLIQKYAV 978
             S G DI   GFW K ++      S+ +  DD+Q +AV+GMKAWEKM  G  KL++KYAV
Sbjct: 235  ISLGEDIEAHGFWFKKKRVDVNTNSMAMQSDDIQAIAVRGMKAWEKMHGGASKLMEKYAV 294

Query: 979  QTCGYCPEVQVGPKGHRVRQCQAFKHQMRDGQHAWQEATFDDLVPPVYVWHVQDANGSNP 1158
            QTCGYCPEVQVGPKGHR R CQAFKHQMRDGQHAWQEA  DDL PPVYV+H++D     P
Sbjct: 295  QTCGYCPEVQVGPKGHRGRNCQAFKHQMRDGQHAWQEARIDDLAPPVYVFHIRDDQPRKP 354

Query: 1159 VLDQLKRYYGKLPAVVELFAQAGAQVGEHYSNVMRGDVAVPALHEEKLVV 1308
            ++++LK+YYG LPAVVELFAQAGA V + Y+ +MR DV +P + EEK VV
Sbjct: 355  LVNELKKYYGMLPAVVELFAQAGAPVDKSYACMMREDVVIPQMDEEKWVV 404


>ref|XP_002518315.1| APO protein 3, mitochondrial precursor, putative [Ricinus communis]
            gi|223542535|gb|EEF44075.1| APO protein 3, mitochondrial
            precursor, putative [Ricinus communis]
          Length = 390

 Score =  504 bits (1298), Expect = e-140
 Identities = 235/373 (63%), Positives = 298/373 (79%)
 Frame = +1

Query: 190  SSALSDASKCVELPKKLKKSERKPLVTGINVLKRRARLEKKIRQEVRETVPKPPENGLLV 369
            S+  S  S  VELP+KLKKSERKP VT +N LKR+AR E+K RQ VRE + +PPENGLLV
Sbjct: 18   SALYSTGSTYVELPRKLKKSERKPWVTSVNELKRKAREERKDRQLVRERILRPPENGLLV 77

Query: 370  EKLIPVAHDVYNARSMLFTCVSKVMKSIPVYTCGLCGEVHVGLRPNKIKSCIVPGNPSRK 549
            ++LIPVAH+VY+AR  L +CVSKV++SI VY+C +CGEVHVG  P+KI++C V G+ + K
Sbjct: 78   KELIPVAHEVYSARMELLSCVSKVVESIAVYSCSVCGEVHVGHPPHKIRTCNVIGSQANK 137

Query: 550  EHRWEKASVEHVLPLVESFHLYDRVGRAVSHGECLEVDRIPAIVELCVQAGLDIPEYPTR 729
            EH W    +E+VLPLVESFHLYDR+GRAVSH E ++VDRIPAI+ELC+Q G++IPEYPTR
Sbjct: 138  EHMWNIGGMENVLPLVESFHLYDRLGRAVSHNERIQVDRIPAIMELCIQGGVNIPEYPTR 197

Query: 730  RRTIPVYIVAGKIKDFEKRFPQFDSSGNDINEFGFWEKHEKPGRENKSLDLPLDDLQGVA 909
            RR  P Y VAG+I DFE+RFP+ D+ G  IN  GFWE+  K  + ++ +D   D LQG+A
Sbjct: 198  RRAFPAYSVAGRIMDFERRFPKEDAPGKGINTNGFWERRNKSSKHDEPMDFHSDGLQGIA 257

Query: 910  VQGMKAWEKMRSGTLKLIQKYAVQTCGYCPEVQVGPKGHRVRQCQAFKHQMRDGQHAWQE 1089
            ++GM+AW+K+++G  +L++KYAV TCGYCPEVQVGPKGH+VR CQA+KHQMRDGQHAWQ+
Sbjct: 258  IRGMEAWKKLQTGATELMRKYAVHTCGYCPEVQVGPKGHKVRNCQAYKHQMRDGQHAWQQ 317

Query: 1090 ATFDDLVPPVYVWHVQDANGSNPVLDQLKRYYGKLPAVVELFAQAGAQVGEHYSNVMRGD 1269
            AT +DLVPPVYVWHV+D     P+++ LKRYYG LPAV+ELFAQAGA V + Y+ +MR D
Sbjct: 318  ATVNDLVPPVYVWHVRDQQSGEPLVNNLKRYYGMLPAVLELFAQAGAHVSDDYAGLMRED 377

Query: 1270 VAVPALHEEKLVV 1308
            V VP L EEK V+
Sbjct: 378  VTVPELDEEKWVI 390


>ref|XP_003518143.1| PREDICTED: LOW QUALITY PROTEIN: APO protein 3, mitochondrial-like
            [Glycine max]
          Length = 363

 Score =  486 bits (1251), Expect = e-135
 Identities = 239/366 (65%), Positives = 282/366 (77%)
 Frame = +1

Query: 211  SKCVELPKKLKKSERKPLVTGINVLKRRARLEKKIRQEVRETVPKPPENGLLVEKLIPVA 390
            S C ELP+KL KSERKP VT  N LKR+ARL+KK RQ+V E   +PPENGLLV+ LIP+A
Sbjct: 2    STCNELPRKLNKSERKPPVTSFNDLKRQARLKKKERQKVHENTLQPPENGLLVDHLIPIA 61

Query: 391  HDVYNARSMLFTCVSKVMKSIPVYTCGLCGEVHVGLRPNKIKSCIVPGNPSRKEHRWEKA 570
            H+VY AR  L + VS ++    +YTC LCGEVHVG  P+KI++C V G+PS KEH W K 
Sbjct: 62   HEVYAARCELISSVSTLVNYTAIYTCSLCGEVHVGHAPHKIRTCDVRGSPSSKEHSWAKV 121

Query: 571  SVEHVLPLVESFHLYDRVGRAVSHGECLEVDRIPAIVELCVQAGLDIPEYPTRRRTIPVY 750
             VEHVLPLV+SFHLYDR+GRAVSH E LEVDRIPAIVELCVQAG++IPEYPTRRR+ PVY
Sbjct: 122  GVEHVLPLVDSFHLYDRIGRAVSHNEMLEVDRIPAIVELCVQAGINIPEYPTRRRSSPVY 181

Query: 751  IVAGKIKDFEKRFPQFDSSGNDINEFGFWEKHEKPGRENKSLDLPLDDLQGVAVQGMKAW 930
             VAG+I DFEKRFP+  S G DI   GFW           S+ +  DD+Q  AV+GMKAW
Sbjct: 182  TVAGRIIDFEKRFPKEISLGEDIEAHGFWLMDV----NTNSMAMQSDDIQATAVRGMKAW 237

Query: 931  EKMRSGTLKLIQKYAVQTCGYCPEVQVGPKGHRVRQCQAFKHQMRDGQHAWQEATFDDLV 1110
            EKMR G  KL+ KYAVQTCGY PEVQVGPKGHRVR CQAFKHQ+RDGQ AW  AT DDL 
Sbjct: 238  EKMRGGASKLMGKYAVQTCGYYPEVQVGPKGHRVRNCQAFKHQIRDGQRAWXGATIDDLA 297

Query: 1111 PPVYVWHVQDANGSNPVLDQLKRYYGKLPAVVELFAQAGAQVGEHYSNVMRGDVAVPALH 1290
            PPVYV+H++D     P++++LKRYYG LPAVVELFAQAGA V ++Y+++MR DV +P + 
Sbjct: 298  PPVYVYHIRDDQHRKPLVNELKRYYGMLPAVVELFAQAGAPVDKNYASMMREDVVIPEMD 357

Query: 1291 EEKLVV 1308
            EEKLVV
Sbjct: 358  EEKLVV 363


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