BLASTX nr result

ID: Coptis25_contig00014206 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00014206
         (599 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACK44526.1| AT5G09995-like protein [Arabidopsis arenosa]           189   2e-46
ref|NP_974759.1| uncharacterized protein [Arabidopsis thaliana] ...   187   1e-45
ref|NP_974760.1| uncharacterized protein [Arabidopsis thaliana] ...   187   1e-45
ref|NP_568225.1| uncharacterized protein [Arabidopsis thaliana] ...   187   1e-45
gb|AAM62717.1| unknown [Arabidopsis thaliana]                         187   1e-45

>gb|ACK44526.1| AT5G09995-like protein [Arabidopsis arenosa]
          Length = 256

 Score =  189 bits (481), Expect = 2e-46
 Identities = 97/134 (72%), Positives = 111/134 (82%)
 Frame = +2

Query: 194 FSSLSIQSDAPLLTTSVGSPPPSLSQWNLTNRHITLLNAVACVAAISTSWLFFSAIPALL 373
           +S+    S +P LT+SVG PP  LSQW  T +H  LLN VAC+ AIS SWLFF+AIP LL
Sbjct: 63  YSNPQEPSISPQLTSSVGQPPLQLSQWTFTQKHFILLNVVACITAISASWLFFAAIPTLL 122

Query: 374 AFRKAALSLEKLMDVMREELPDTMAAVRLSGMEISDLTMELSDLGQEITKGVRNSTQAVR 553
           AF+KAA SLEKL+DV REELPDTMAAVRLSGMEISDLTMELSDLGQ IT+GV++ST+A+R
Sbjct: 123 AFKKAAESLEKLLDVTREELPDTMAAVRLSGMEISDLTMELSDLGQGITQGVKSSTRAIR 182

Query: 554 VAEDRLRRLTTMVP 595
           VAEDRLRRLT M P
Sbjct: 183 VAEDRLRRLTNMNP 196


>ref|NP_974759.1| uncharacterized protein [Arabidopsis thaliana]
           gi|332004094|gb|AED91477.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 257

 Score =  187 bits (475), Expect = 1e-45
 Identities = 95/122 (77%), Positives = 105/122 (86%)
 Frame = +2

Query: 230 LTTSVGSPPPSLSQWNLTNRHITLLNAVACVAAISTSWLFFSAIPALLAFRKAALSLEKL 409
           LT+SVG PP  LSQW  T +H  LLN VACV AIS SWLFF+AIP LLAF+KAA SLEKL
Sbjct: 75  LTSSVGQPPLQLSQWTFTQKHFVLLNVVACVTAISASWLFFAAIPTLLAFKKAAESLEKL 134

Query: 410 MDVMREELPDTMAAVRLSGMEISDLTMELSDLGQEITKGVRNSTQAVRVAEDRLRRLTTM 589
           +DV REELPDTMAAVRLSGMEISDLTMELSDLGQ IT+GV++ST+A+RVAEDRLRRLT M
Sbjct: 135 LDVTREELPDTMAAVRLSGMEISDLTMELSDLGQGITQGVKSSTRAIRVAEDRLRRLTNM 194

Query: 590 VP 595
            P
Sbjct: 195 NP 196


>ref|NP_974760.1| uncharacterized protein [Arabidopsis thaliana]
           gi|332004095|gb|AED91478.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 256

 Score =  187 bits (475), Expect = 1e-45
 Identities = 95/122 (77%), Positives = 105/122 (86%)
 Frame = +2

Query: 230 LTTSVGSPPPSLSQWNLTNRHITLLNAVACVAAISTSWLFFSAIPALLAFRKAALSLEKL 409
           LT+SVG PP  LSQW  T +H  LLN VACV AIS SWLFF+AIP LLAF+KAA SLEKL
Sbjct: 75  LTSSVGQPPLQLSQWTFTQKHFVLLNVVACVTAISASWLFFAAIPTLLAFKKAAESLEKL 134

Query: 410 MDVMREELPDTMAAVRLSGMEISDLTMELSDLGQEITKGVRNSTQAVRVAEDRLRRLTTM 589
           +DV REELPDTMAAVRLSGMEISDLTMELSDLGQ IT+GV++ST+A+RVAEDRLRRLT M
Sbjct: 135 LDVTREELPDTMAAVRLSGMEISDLTMELSDLGQGITQGVKSSTRAIRVAEDRLRRLTNM 194

Query: 590 VP 595
            P
Sbjct: 195 NP 196


>ref|NP_568225.1| uncharacterized protein [Arabidopsis thaliana]
           gi|26453006|dbj|BAC43579.1| unknown protein [Arabidopsis
           thaliana] gi|28973017|gb|AAO63833.1| unknown protein
           [Arabidopsis thaliana] gi|332004096|gb|AED91479.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 205

 Score =  187 bits (475), Expect = 1e-45
 Identities = 95/122 (77%), Positives = 105/122 (86%)
 Frame = +2

Query: 230 LTTSVGSPPPSLSQWNLTNRHITLLNAVACVAAISTSWLFFSAIPALLAFRKAALSLEKL 409
           LT+SVG PP  LSQW  T +H  LLN VACV AIS SWLFF+AIP LLAF+KAA SLEKL
Sbjct: 75  LTSSVGQPPLQLSQWTFTQKHFVLLNVVACVTAISASWLFFAAIPTLLAFKKAAESLEKL 134

Query: 410 MDVMREELPDTMAAVRLSGMEISDLTMELSDLGQEITKGVRNSTQAVRVAEDRLRRLTTM 589
           +DV REELPDTMAAVRLSGMEISDLTMELSDLGQ IT+GV++ST+A+RVAEDRLRRLT M
Sbjct: 135 LDVTREELPDTMAAVRLSGMEISDLTMELSDLGQGITQGVKSSTRAIRVAEDRLRRLTNM 194

Query: 590 VP 595
            P
Sbjct: 195 NP 196


>gb|AAM62717.1| unknown [Arabidopsis thaliana]
          Length = 205

 Score =  187 bits (475), Expect = 1e-45
 Identities = 95/122 (77%), Positives = 105/122 (86%)
 Frame = +2

Query: 230 LTTSVGSPPPSLSQWNLTNRHITLLNAVACVAAISTSWLFFSAIPALLAFRKAALSLEKL 409
           LT+SVG PP  LSQW  T +H  LLN VACV AIS SWLFF+AIP LLAF+KAA SLEKL
Sbjct: 75  LTSSVGQPPLQLSQWTFTQKHFVLLNVVACVTAISASWLFFAAIPTLLAFKKAAESLEKL 134

Query: 410 MDVMREELPDTMAAVRLSGMEISDLTMELSDLGQEITKGVRNSTQAVRVAEDRLRRLTTM 589
           +DV REELPDTMAAVRLSGMEISDLTMELSDLGQ IT+GV++ST+A+RVAEDRLRRLT M
Sbjct: 135 LDVTREELPDTMAAVRLSGMEISDLTMELSDLGQGITQGVKSSTRAIRVAEDRLRRLTNM 194

Query: 590 VP 595
            P
Sbjct: 195 NP 196


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