BLASTX nr result

ID: Coptis25_contig00014200 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00014200
         (857 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN63582.1| hypothetical protein VITISV_033336 [Vitis vinifera]    84   3e-14
ref|XP_004137812.1| PREDICTED: DNA-binding protein S1FA2-like [C...    83   7e-14
ref|XP_002285011.1| PREDICTED: DNA-binding protein S1FA2 isoform...    83   7e-14
ref|XP_002525167.1| DNA-binding protein S1FA, putative [Ricinus ...    81   3e-13
ref|XP_004143239.1| PREDICTED: DNA-binding protein S1FA1-like [C...    80   5e-13

>emb|CAN63582.1| hypothetical protein VITISV_033336 [Vitis vinifera]
          Length = 108

 Score = 84.3 bits (207), Expect = 3e-14
 Identities = 43/73 (58%), Positives = 51/73 (69%)
 Frame = -2

Query: 538 IKGNVMKDVEAKGFNPGLIVLLVVASLMLVFLVGNYALYMYAQXXXXXXXXXXXXXXXXX 359
           ++GNV+KD +AKGFNPGLIVLL+V  L+LVFLVGNYALY+YAQ                 
Sbjct: 36  LQGNVIKDADAKGFNPGLIVLLLVVGLLLVFLVGNYALYVYAQKTLPPRKKKPVSKKKMK 95

Query: 358 XXKLKQGVSAPGE 320
             +LKQGVSAPGE
Sbjct: 96  KERLKQGVSAPGE 108


>ref|XP_004137812.1| PREDICTED: DNA-binding protein S1FA2-like [Cucumis sativus]
           gi|449516221|ref|XP_004165146.1| PREDICTED: DNA-binding
           protein S1FA2-like [Cucumis sativus]
          Length = 78

 Score = 83.2 bits (204), Expect = 7e-14
 Identities = 42/72 (58%), Positives = 49/72 (68%)
 Frame = -2

Query: 535 KGNVMKDVEAKGFNPGLIVLLVVASLMLVFLVGNYALYMYAQXXXXXXXXXXXXXXXXXX 356
           KGNV+ D+EAKGFNP LIVLL+V  L+L+FLVGNYALY+YAQ                  
Sbjct: 7   KGNVINDIEAKGFNPALIVLLLVGGLLLIFLVGNYALYLYAQKNLPPKKKKPVSKKKMKR 66

Query: 355 XKLKQGVSAPGE 320
            +LKQGVSAPGE
Sbjct: 67  ERLKQGVSAPGE 78


>ref|XP_002285011.1| PREDICTED: DNA-binding protein S1FA2 isoform 1 [Vitis vinifera]
           gi|225435257|ref|XP_002285012.1| PREDICTED: DNA-binding
           protein S1FA2 isoform 2 [Vitis vinifera]
           gi|297746228|emb|CBI16284.3| unnamed protein product
           [Vitis vinifera]
          Length = 89

 Score = 83.2 bits (204), Expect = 7e-14
 Identities = 43/71 (60%), Positives = 49/71 (69%)
 Frame = -2

Query: 532 GNVMKDVEAKGFNPGLIVLLVVASLMLVFLVGNYALYMYAQXXXXXXXXXXXXXXXXXXX 353
           GNV+KD +AKGFNPGLIVLL+V  L+LVFLVGNYALY+YAQ                   
Sbjct: 19  GNVIKDADAKGFNPGLIVLLLVVGLLLVFLVGNYALYVYAQKTLPPRKKKPVSKKKMKKE 78

Query: 352 KLKQGVSAPGE 320
           +LKQGVSAPGE
Sbjct: 79  RLKQGVSAPGE 89


>ref|XP_002525167.1| DNA-binding protein S1FA, putative [Ricinus communis]
           gi|223535464|gb|EEF37133.1| DNA-binding protein S1FA,
           putative [Ricinus communis]
          Length = 89

 Score = 80.9 bits (198), Expect = 3e-13
 Identities = 40/71 (56%), Positives = 47/71 (66%)
 Frame = -2

Query: 532 GNVMKDVEAKGFNPGLIVLLVVASLMLVFLVGNYALYMYAQXXXXXXXXXXXXXXXXXXX 353
           GNV+KDVE KGFNPGLIVLLV+  ++L FL+GNY LYMYAQ                   
Sbjct: 19  GNVVKDVETKGFNPGLIVLLVIGGIVLTFLIGNYVLYMYAQKTLPPKKKKPVSKKKMKRE 78

Query: 352 KLKQGVSAPGE 320
           +L+QGVSAPGE
Sbjct: 79  RLRQGVSAPGE 89


>ref|XP_004143239.1| PREDICTED: DNA-binding protein S1FA1-like [Cucumis sativus]
           gi|449482509|ref|XP_004156305.1| PREDICTED: DNA-binding
           protein S1FA1-like [Cucumis sativus]
          Length = 89

 Score = 80.5 bits (197), Expect = 5e-13
 Identities = 42/71 (59%), Positives = 47/71 (66%)
 Frame = -2

Query: 532 GNVMKDVEAKGFNPGLIVLLVVASLMLVFLVGNYALYMYAQXXXXXXXXXXXXXXXXXXX 353
           GNV++D EA+GFNPGLIVLLVV  L+  FLVGNYALYMYAQ                   
Sbjct: 19  GNVIRDGEARGFNPGLIVLLVVGGLLFAFLVGNYALYMYAQKTLPPKKKKPVSKKKMKRE 78

Query: 352 KLKQGVSAPGE 320
           +LKQGVSAPGE
Sbjct: 79  RLKQGVSAPGE 89


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