BLASTX nr result

ID: Coptis25_contig00014196 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00014196
         (245 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284773.2| PREDICTED: coatomer subunit beta'-2-like [Vi...    60   7e-19
emb|CBI36167.3| unnamed protein product [Vitis vinifera]               60   7e-19
ref|XP_002299635.1| predicted protein [Populus trichocarpa] gi|2...    62   7e-19
ref|XP_002889315.1| hypothetical protein ARALYDRAFT_895999 [Arab...    61   7e-19
emb|CAN59846.1| hypothetical protein VITISV_004513 [Vitis vinifera]    60   7e-19

>ref|XP_002284773.2| PREDICTED: coatomer subunit beta'-2-like [Vitis vinifera]
          Length = 952

 Score = 60.1 bits (144), Expect(2) = 7e-19
 Identities = 30/41 (73%), Positives = 36/41 (87%), Gaps = 1/41 (2%)
 Frame = -2

Query: 145 EIATELQSESRWKQLGELAMSI*KLDMAEKCF-HATDLNGL 26
           +IATE+QSES+WKQLGELAMS  KL+MAE+C  HA DL+GL
Sbjct: 708 DIATEVQSESKWKQLGELAMSTGKLEMAEECLKHAMDLSGL 748



 Score = 58.5 bits (140), Expect(2) = 7e-19
 Identities = 26/32 (81%), Positives = 31/32 (96%)
 Frame = -3

Query: 243 LLSLIEYKTLVIRGDIEQANEILPTIPKEQHN 148
           LLSLIEYKTLV+RGD+E+ANE+LP+IPKE HN
Sbjct: 637 LLSLIEYKTLVMRGDLERANELLPSIPKEHHN 668


>emb|CBI36167.3| unnamed protein product [Vitis vinifera]
          Length = 933

 Score = 60.1 bits (144), Expect(2) = 7e-19
 Identities = 30/41 (73%), Positives = 36/41 (87%), Gaps = 1/41 (2%)
 Frame = -2

Query: 145 EIATELQSESRWKQLGELAMSI*KLDMAEKCF-HATDLNGL 26
           +IATE+QSES+WKQLGELAMS  KL+MAE+C  HA DL+GL
Sbjct: 685 DIATEVQSESKWKQLGELAMSTGKLEMAEECLKHAMDLSGL 725



 Score = 58.5 bits (140), Expect(2) = 7e-19
 Identities = 26/32 (81%), Positives = 31/32 (96%)
 Frame = -3

Query: 243 LLSLIEYKTLVIRGDIEQANEILPTIPKEQHN 148
           LLSLIEYKTLV+RGD+E+ANE+LP+IPKE HN
Sbjct: 614 LLSLIEYKTLVMRGDLERANELLPSIPKEHHN 645


>ref|XP_002299635.1| predicted protein [Populus trichocarpa] gi|222846893|gb|EEE84440.1|
           predicted protein [Populus trichocarpa]
          Length = 922

 Score = 61.6 bits (148), Expect(2) = 7e-19
 Identities = 31/41 (75%), Positives = 37/41 (90%), Gaps = 1/41 (2%)
 Frame = -2

Query: 145 EIATELQSESRWKQLGELAMSI*KLDMAEKCF-HATDLNGL 26
           EIA+E+QSES+WKQLGELAMS  KL+MAE+C  HATDL+GL
Sbjct: 660 EIASEVQSESKWKQLGELAMSSGKLEMAEECMRHATDLSGL 700



 Score = 57.0 bits (136), Expect(2) = 7e-19
 Identities = 25/32 (78%), Positives = 31/32 (96%)
 Frame = -3

Query: 243 LLSLIEYKTLVIRGDIEQANEILPTIPKEQHN 148
           LLSLIEYKTLV+RGD+E+A+E+LP+IPKE HN
Sbjct: 589 LLSLIEYKTLVMRGDLERASEVLPSIPKEHHN 620


>ref|XP_002889315.1| hypothetical protein ARALYDRAFT_895999 [Arabidopsis lyrata subsp.
           lyrata] gi|297335156|gb|EFH65574.1| hypothetical protein
           ARALYDRAFT_895999 [Arabidopsis lyrata subsp. lyrata]
          Length = 910

 Score = 60.8 bits (146), Expect(2) = 7e-19
 Identities = 28/32 (87%), Positives = 31/32 (96%)
 Frame = -3

Query: 243 LLSLIEYKTLVIRGDIEQANEILPTIPKEQHN 148
           LLSLIEYKTLV+RGD+EQANEILP+IPKE HN
Sbjct: 581 LLSLIEYKTLVMRGDLEQANEILPSIPKEHHN 612



 Score = 57.8 bits (138), Expect(2) = 7e-19
 Identities = 29/41 (70%), Positives = 34/41 (82%), Gaps = 1/41 (2%)
 Frame = -2

Query: 145 EIATELQSESRWKQLGELAMSI*KLDMAEKCF-HATDLNGL 26
           +IA E Q+ES+WKQLGELAMS  KLDMAE+C  HA DL+GL
Sbjct: 652 DIAVEAQNESKWKQLGELAMSTGKLDMAEECMRHAMDLSGL 692


>emb|CAN59846.1| hypothetical protein VITISV_004513 [Vitis vinifera]
          Length = 901

 Score = 60.1 bits (144), Expect(2) = 7e-19
 Identities = 30/41 (73%), Positives = 36/41 (87%), Gaps = 1/41 (2%)
 Frame = -2

Query: 145 EIATELQSESRWKQLGELAMSI*KLDMAEKCF-HATDLNGL 26
           +IATE+QSES+WKQLGELAMS  KL+MAE+C  HA DL+GL
Sbjct: 653 DIATEVQSESKWKQLGELAMSTGKLEMAEECLKHAMDLSGL 693



 Score = 58.5 bits (140), Expect(2) = 7e-19
 Identities = 26/32 (81%), Positives = 31/32 (96%)
 Frame = -3

Query: 243 LLSLIEYKTLVIRGDIEQANEILPTIPKEQHN 148
           LLSLIEYKTLV+RGD+E+ANE+LP+IPKE HN
Sbjct: 582 LLSLIEYKTLVMRGDLERANELLPSIPKEHHN 613


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