BLASTX nr result

ID: Coptis25_contig00014191 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00014191
         (262 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269369.1| PREDICTED: uncharacterized protein LOC100258...    64   1e-08
ref|XP_004161429.1| PREDICTED: uncharacterized LOC101207232 [Cuc...    63   3e-08
ref|XP_004139573.1| PREDICTED: uncharacterized protein LOC101207...    63   3e-08
ref|XP_002264375.1| PREDICTED: uncharacterized protein LOC100266...    57   1e-06
ref|XP_002522665.1| structural constituent of cell wall, putativ...    55   5e-06

>ref|XP_002269369.1| PREDICTED: uncharacterized protein LOC100258455 [Vitis vinifera]
          Length = 442

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 33/62 (53%), Positives = 39/62 (62%), Gaps = 4/62 (6%)
 Frame = +1

Query: 1   SMPIMGGNKEFSSSGLFATDCKXXXXXXXXXXXXS----ETGEYASLSCESGMDGRGVVC 168
           +MPI+GG KEF+SSGLF TDC                  E  EYA+L+C SG+DGRGVVC
Sbjct: 381 AMPILGGEKEFASSGLFTTDCAVARFSGRLPSGDDAYSLEKFEYANLNCVSGIDGRGVVC 440

Query: 169 KR 174
           KR
Sbjct: 441 KR 442


>ref|XP_004161429.1| PREDICTED: uncharacterized LOC101207232 [Cucumis sativus]
          Length = 466

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 30/60 (50%), Positives = 40/60 (66%), Gaps = 2/60 (3%)
 Frame = +1

Query: 1   SMPIMGGNKEFSSSGLFATDCKXXXXXXXXXXXXS--ETGEYASLSCESGMDGRGVVCKR 174
           +MP++GG+KEF+SS +FATDC+            S  E   YA++SC S MDG+GVVCKR
Sbjct: 407 AMPVLGGDKEFASSSIFATDCEVTRFTKEMDEKESYVEAAAYANMSCGSDMDGQGVVCKR 466


>ref|XP_004139573.1| PREDICTED: uncharacterized protein LOC101207232 [Cucumis sativus]
          Length = 456

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 30/60 (50%), Positives = 40/60 (66%), Gaps = 2/60 (3%)
 Frame = +1

Query: 1   SMPIMGGNKEFSSSGLFATDCKXXXXXXXXXXXXS--ETGEYASLSCESGMDGRGVVCKR 174
           +MP++GG+KEF+SS +FATDC+            S  E   YA++SC S MDG+GVVCKR
Sbjct: 397 AMPVLGGDKEFASSSIFATDCEVTRFTKEMDEKESYVEAAAYANMSCGSDMDGQGVVCKR 456


>ref|XP_002264375.1| PREDICTED: uncharacterized protein LOC100266044 [Vitis vinifera]
           gi|296090432|emb|CBI40251.3| unnamed protein product
           [Vitis vinifera]
          Length = 333

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 28/57 (49%), Positives = 35/57 (61%)
 Frame = +1

Query: 4   MPIMGGNKEFSSSGLFATDCKXXXXXXXXXXXXSETGEYASLSCESGMDGRGVVCKR 174
           MP++GG  +FSSS +FATDC             + TGEY SL C SG+ G GVVCK+
Sbjct: 278 MPVLGGLHKFSSSNIFATDCPASQFGNHALPE-NRTGEYPSLHCSSGLKGTGVVCKK 333


>ref|XP_002522665.1| structural constituent of cell wall, putative [Ricinus communis]
           gi|223538141|gb|EEF39752.1| structural constituent of
           cell wall, putative [Ricinus communis]
          Length = 535

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 29/60 (48%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
 Frame = +1

Query: 4   MPIMGGNKEFSSSGLFATDC---KXXXXXXXXXXXXSETGEYASLSCESGMDGRGVVCKR 174
           MP+MGGNKEF +S L A DC   +             +  E   LSC SGMDG GVVCKR
Sbjct: 476 MPVMGGNKEFQTSSLLAADCAVARFNGGNGFNAEGSLQGFELPGLSCASGMDGEGVVCKR 535


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