BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00014169
         (2130 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN80445.1| hypothetical protein VITISV_043284 [Vitis vinifera]   329   2e-87
ref|XP_003633804.1| PREDICTED: RING-H2 finger protein ATL46-like...   328   3e-87
ref|XP_002265075.2| PREDICTED: RING-H2 finger protein ATL46-like...   319   2e-84
gb|ACI42847.1| RING finger protein [Glycine max]                      318   4e-84
ref|XP_002521028.1| ring finger protein, putative [Ricinus commu...   318   5e-84

>emb|CAN80445.1| hypothetical protein VITISV_043284 [Vitis vinifera]
          Length = 1090

 Score =  329 bits (844), Expect = 2e-87
 Identities = 179/308 (58%), Positives = 209/308 (67%), Gaps = 4/308 (1%)
 Frame = -1

Query: 1530 SGLLHLLVRFLVKQPXXXXXXS-NRYPEMSGSDAXXXXXXXXXXXHDSGLDQAFIDALPV 1354
            SGLLHLLVRFL++ P        NRYPE+S SDA           HDSGLDQAFIDALPV
Sbjct: 788  SGLLHLLVRFLIRHPSSSTSSQSNRYPEISESDALQRQLQQLFHLHDSGLDQAFIDALPV 847

Query: 1353 FLYKEVMGLKEPFDCAVCLCEFSEQDKLRLLPLCGHAFHINCIDTWLLSNSTCPLCRGTL 1174
            FLYKE++GLKEPFDCAVCLCEFSE+DKLRLLP+C HAFHINCIDTWLLSNSTCPLCRGTL
Sbjct: 848  FLYKEIVGLKEPFDCAVCLCEFSEKDKLRLLPVCSHAFHINCIDTWLLSNSTCPLCRGTL 907

Query: 1173 FTPGLAIENPVFDVDLQREEDGRVVQGDCENGFXXXXXXXXXXXXXXXXXVYHVRLGKFK 994
            F PG ++ENP+FD D  REEDG    G  ENGF                 V+ VRLGKF+
Sbjct: 908  FAPGFSMENPIFDFDDLREEDG--FPGHGENGFASGPKTVEIEEVVGEKGVFPVRLGKFR 965

Query: 993  NVSNVGGGVAEETGIAETSSSHLDARRCYSMGSFQYVVADSTLQVAALSHDKDVSGNLKL 814
             V++  G    ET   ETSSS+LDARRCYSMGSFQYVV DS L+VA     +   G +  
Sbjct: 966  KVADXSG----ETAGGETSSSNLDARRCYSMGSFQYVVGDSILRVALNHEQQHPDGKIVK 1021

Query: 813  GERHNTVSSLADGDVDGKKLSGASKGESFSVSKIWLWSKKGSYPGSSN---PNMNSLNIG 643
            G  +N   S+ + + +G + S  +KG+S+SVSKIWLWSKKG +P SS+     M SLN+ 
Sbjct: 1022 GIENNANPSINE-ETEGTRNSFVTKGDSYSVSKIWLWSKKGKFPSSSDNTQTGMPSLNVD 1080

Query: 642  LPLTARTQ 619
            LP   R Q
Sbjct: 1081 LPWMGRKQ 1088


>ref|XP_003633804.1| PREDICTED: RING-H2 finger protein ATL46-like [Vitis vinifera]
          Length = 397

 Score =  328 bits (842), Expect = 3e-87
 Identities = 179/308 (58%), Positives = 209/308 (67%), Gaps = 4/308 (1%)
 Frame = -1

Query: 1530 SGLLHLLVRFLVKQPXXXXXXS-NRYPEMSGSDAXXXXXXXXXXXHDSGLDQAFIDALPV 1354
            SGLLHLLVRFL++ P        NRYPE+S SDA           HDSGLDQAFIDALPV
Sbjct: 95   SGLLHLLVRFLIRHPSSSTSSQSNRYPEISESDALQRQLQQLFHLHDSGLDQAFIDALPV 154

Query: 1353 FLYKEVMGLKEPFDCAVCLCEFSEQDKLRLLPLCGHAFHINCIDTWLLSNSTCPLCRGTL 1174
            FLYKE++GLKEPFDCAVCLCEFSE+DKLRLLP+C HAFHINCIDTWLLSNSTCPLCRGTL
Sbjct: 155  FLYKEIVGLKEPFDCAVCLCEFSEKDKLRLLPVCSHAFHINCIDTWLLSNSTCPLCRGTL 214

Query: 1173 FTPGLAIENPVFDVDLQREEDGRVVQGDCENGFXXXXXXXXXXXXXXXXXVYHVRLGKFK 994
            F PG ++ENP+FD D  REEDG    G  ENGF                 V+ VRLGKF+
Sbjct: 215  FAPGFSMENPIFDFDDLREEDG--FPGHGENGFASGPKTVEIEEVVGEKGVFPVRLGKFR 272

Query: 993  NVSNVGGGVAEETGIAETSSSHLDARRCYSMGSFQYVVADSTLQVAALSHDKDVSGNLKL 814
             V++  G    ET   ETSSS+LDARRCYSMGSFQYVV DS L+VA     +   G +  
Sbjct: 273  KVADGSG----ETAGGETSSSNLDARRCYSMGSFQYVVGDSILRVALNHEQQHPDGKIVK 328

Query: 813  GERHNTVSSLADGDVDGKKLSGASKGESFSVSKIWLWSKKGSYPGSSN---PNMNSLNIG 643
            G  +N   S+ + + +G + S  +KG+S+SVSKIWLWSKKG +P SS+     M SLN+ 
Sbjct: 329  GIENNANPSINE-ETEGTRNSFVTKGDSYSVSKIWLWSKKGKFPSSSDNTQTGMPSLNVD 387

Query: 642  LPLTARTQ 619
            LP   R Q
Sbjct: 388  LPWMGRKQ 395


>ref|XP_002265075.2| PREDICTED: RING-H2 finger protein ATL46-like [Vitis vinifera]
          Length = 393

 Score =  319 bits (818), Expect = 2e-84
 Identities = 182/326 (55%), Positives = 211/326 (64%), Gaps = 20/326 (6%)
 Frame = -1

Query: 1530 SGLLHLLVRFLVK-QPXXXXXXSNRYPEMSGSDAXXXXXXXXXXXHDSGLDQAFIDALPV 1354
            SGLLHLLVRFLVK +       SNRY E S S A           HDSGLDQAFIDALPV
Sbjct: 72   SGLLHLLVRFLVKHRSSSSISQSNRYQETSSSHAFQRQLQQLFHLHDSGLDQAFIDALPV 131

Query: 1353 FLYKEVMGLKEPFDCAVCLCEFSEQDKLRLLPLCGHAFHINCIDTWLLSNSTCPLCRGTL 1174
            FLYK+++GLKEPFDCAVCLCEFS++DKLRLLP+C HAFHI CIDTWLLSNSTCPLCRGTL
Sbjct: 132  FLYKDIVGLKEPFDCAVCLCEFSQEDKLRLLPMCSHAFHIECIDTWLLSNSTCPLCRGTL 191

Query: 1173 FTPGLAIENPVFDVDLQREEDGRVVQGDCENGFXXXXXXXXXXXXXXXXXVYHVRLGKFK 994
            F PGLA+EN VFD +  REE G    GD  +                   V+ VRLGKF+
Sbjct: 192  FNPGLAMENSVFDFEDSREEGGLSSNGDGVSS----AQKPPEDDIASEKRVFSVRLGKFR 247

Query: 993  NVSNVGGGVA--------------EETGIAETSSSHLDARRCYSMGSFQYVVADSTLQVA 856
             ++  GGG                 E G  ETS S+LDARRC+SMGSFQYVVA+S LQVA
Sbjct: 248  GLNGGGGGGGGGGGGGGGGEGEGEGERGGGETSCSNLDARRCFSMGSFQYVVANSDLQVA 307

Query: 855  ALSHDKDVSGN----LKLGERHNTVSSLADGDVDGKKLSGASKGESFSVSKIWLWSKKGS 688
               +  D   +    L  G   +T +S  DGDV+GKK+S  SK ESFSVSKIWLW KKG 
Sbjct: 308  LCPNRADAGSDAVVKLMKGRGGHTGNSSTDGDVEGKKISIGSKDESFSVSKIWLWPKKGK 367

Query: 687  YPGSSNPNMN-SLNIGLPLTARTQGS 613
            +P SS+ ++  S+N+G P T RTQ S
Sbjct: 368  FPSSSDTHIGPSVNVGFPWTERTQAS 393


>gb|ACI42847.1| RING finger protein [Glycine max]
          Length = 392

 Score =  318 bits (815), Expect = 4e-84
 Identities = 178/316 (56%), Positives = 211/316 (66%), Gaps = 10/316 (3%)
 Frame = -1

Query: 1530 SGLLHLLVRFLVKQPXXXXXXSNRYPEMSGSDAXXXXXXXXXXXHDSGLDQAFIDALPVF 1351
            SGLLHLL+RFL+K P      SNR+ E+S SDA           HDSGLDQAFIDALPVF
Sbjct: 83   SGLLHLLIRFLIKHPSSASAQSNRHQELSTSDALQRQLQQLFHLHDSGLDQAFIDALPVF 142

Query: 1350 LYKEVMGLKEPFDCAVCLCEFSEQDKLRLLPLCGHAFHINCIDTWLLSNSTCPLCRGTLF 1171
             YKE++GLKEPFDCAVCLCEFSE+DKLRLLP+C HAFHI+CIDTWLLSNSTCPLCRGTL 
Sbjct: 143  QYKEIVGLKEPFDCAVCLCEFSEKDKLRLLPMCSHAFHISCIDTWLLSNSTCPLCRGTLL 202

Query: 1170 TPGLAIENPVFDVDLQREEDGRVVQGDCENGF-XXXXXXXXXXXXXXXXXVYHVRLGKFK 994
            T G +IENP+FD D  RE++G    G  ENGF                  V+ VRLGKFK
Sbjct: 203  TQGFSIENPIFDFDDLREDEGCPCNG--ENGFNTRQKTVVVEESVEKEKGVFPVRLGKFK 260

Query: 993  NVSNVGGGVAEETGIAETSSSHLDARRCYSMGSFQYVVADSTLQVAALSHDKDVSGNL-- 820
             +S  GGG   E+ + ETSSS+LDARRCYSMGS+QYVV +S L+V  L+HD+   G +  
Sbjct: 261  KLSVKGGG---ESEVGETSSSNLDARRCYSMGSYQYVVGNSDLRV-TLNHDEIGKGQVTR 316

Query: 819  --KLGERHNTVSSLADGDVDGKKLSGASKGESFSVSKIWLWSKKGSYPGS-----SNPNM 661
              K  E  +   S+ +GDV+ KK+S  SKG+SFSVSKIWLW KKG  P S       P  
Sbjct: 317  LTKGMELDDGKVSVEEGDVEAKKISSVSKGDSFSVSKIWLWPKKGKLPTSLDGQFGRPMP 376

Query: 660  NSLNIGLPLTARTQGS 613
            + LN G P     +G+
Sbjct: 377  SYLNTGFPRMREPEGA 392


>ref|XP_002521028.1| ring finger protein, putative [Ricinus communis]
            gi|223539865|gb|EEF41445.1| ring finger protein, putative
            [Ricinus communis]
          Length = 374

 Score =  318 bits (814), Expect = 5e-84
 Identities = 185/313 (59%), Positives = 212/313 (67%), Gaps = 10/313 (3%)
 Frame = -1

Query: 1530 SGLLHLLVRFLVKQ---PXXXXXXSNRYPEMSGSDAXXXXXXXXXXXHDSGLDQAFIDAL 1360
            SGLLHLLVRFL+K           SNRYPEMSGSDA           HDSGLDQAFIDAL
Sbjct: 67   SGLLHLLVRFLIKHRSSSSSSVSESNRYPEMSGSDAFQRQLQQLFHLHDSGLDQAFIDAL 126

Query: 1359 PVFLYKEVMGLKEPFDCAVCLCEFSEQDKLRLLPLCGHAFHINCIDTWLLSNSTCPLCRG 1180
            PVFLYKE+MGLKEPFDCAVCLCE+SE+DKLRLLP C HAFHI+CIDTWLLSNSTCPLCRG
Sbjct: 127  PVFLYKEIMGLKEPFDCAVCLCEYSEKDKLRLLPACSHAFHIDCIDTWLLSNSTCPLCRG 186

Query: 1179 TLFTPGLAIENPVFDVDLQREEDGRVVQGDCENGFXXXXXXXXXXXXXXXXXVYHVRLGK 1000
            TL+TPGL+ ENPVFD +  REE+G  +  +  NG                  V+ VRLGK
Sbjct: 187  TLYTPGLSFENPVFDFEESREEEG--LSSNVGNGI-SVGQKPAENERINSKRVFSVRLGK 243

Query: 999  FKNVSNVGGGVAEETGIAETSSSHLDARRCYSMGSFQYVVADSTLQVAALSHDKDVSGNL 820
            FK+ SNV     +     ETSSS+LDARRC+SMGS+QYVVAD  LQVA        +G+ 
Sbjct: 244  FKS-SNV---EVDRVVEGETSSSNLDARRCFSMGSYQYVVADLNLQVALCPGRNVGTGSF 299

Query: 819  KL-----GERHNTVSSLADGDVDGKKLSGASKGESFSVSKIWLWSKKGSYPGSSNPNMNS 655
            KL     G+  NT SS   GD +GKK++  SKGESFSVSKIW WS+KG  P SS+  M S
Sbjct: 300  KLVKSKNGQNGNT-SSNDIGDAEGKKINIRSKGESFSVSKIWQWSRKGKLPSSSDTYMGS 358

Query: 654  --LNIGLPLTART 622
              L +GLP + RT
Sbjct: 359  SPLAVGLPWSDRT 371