BLASTX nr result
ID: Coptis25_contig00014158
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00014158 (1277 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004139298.1| PREDICTED: topless-related protein 4-like [C... 173 1e-40 ref|XP_003633080.1| PREDICTED: topless-related protein 4-like [V... 172 2e-40 ref|XP_002285341.2| PREDICTED: topless-related protein 4-like is... 172 2e-40 ref|XP_002324641.1| predicted protein [Populus trichocarpa] gi|2... 172 2e-40 ref|XP_002527178.1| WD-repeat protein, putative [Ricinus communi... 170 8e-40 >ref|XP_004139298.1| PREDICTED: topless-related protein 4-like [Cucumis sativus] Length = 1134 Score = 173 bits (438), Expect = 1e-40 Identities = 84/135 (62%), Positives = 105/135 (77%) Frame = -3 Query: 1266 LPVAYDIHWPKHAQSLFSSDELPKNVVTSLNQGSVVRSMDFHPVQ*TLLLVETNVGDIVV 1087 LPV Y H QS +SSD+LPKNVVT+L+QGSVV+SMDFHP Q T+LLV TNVGD+++ Sbjct: 325 LPVGYGNQG--HGQSSYSSDDLPKNVVTTLSQGSVVKSMDFHPQQQTILLVGTNVGDVMI 382 Query: 1086 WELGSRERLAYRNFKV*DIGTRLVPLQTALVKDTAISVNRVA*SPDGALFGVSYNKHIVH 907 WE+G RER+A RNFKV D+ R V LQ +L D S+NRV SPDG LFGV+Y+KHIVH Sbjct: 383 WEVGGRERIAIRNFKVWDLAARSVALQASLASDYTASINRVMWSPDGTLFGVAYSKHIVH 442 Query: 906 VYSYHSSDDIRHHLE 862 +YSY + D++R+HLE Sbjct: 443 IYSYQAGDELRNHLE 457 Score = 109 bits (272), Expect = 2e-21 Identities = 56/112 (50%), Positives = 80/112 (71%), Gaps = 1/112 (0%) Frame = -3 Query: 333 SDWRRTSSLVLYVPSM*SYFYVFFSTHI*S**VYFSFEYI-NLVQIDAHIGSVNDLVFSH 157 SD+ + + V++ P + F V +S HI Y + + + N ++I+AH+GSVNDL F + Sbjct: 414 SDYTASINRVMWSPDG-TLFGVAYSKHIVHIYSYQAGDELRNHLEIEAHVGSVNDLAFLY 472 Query: 156 PNKQLCIVSCGDDKAIKVWDAVTGAKQYMNIMFEGHEAPVLSVCPHYKENIE 1 NKQLC+V+CG+D+ IKVWDAVTG KQ+ FEGH+APV S+CPH+KENI+ Sbjct: 473 ANKQLCLVTCGEDRVIKVWDAVTGVKQF---TFEGHDAPVYSICPHHKENIQ 521 >ref|XP_003633080.1| PREDICTED: topless-related protein 4-like [Vitis vinifera] Length = 1123 Score = 172 bits (436), Expect = 2e-40 Identities = 88/135 (65%), Positives = 105/135 (77%) Frame = -3 Query: 1266 LPVAYDIHWPKHAQSLFSSDELPKNVVTSLNQGSVVRSMDFHPVQ*TLLLVETNVGDIVV 1087 LPVAY H QS +SSD+LPK VV SL QGS VRSMDFHPVQ LLLV TN+GDI+V Sbjct: 326 LPVAYT--GQSHGQSSYSSDDLPKTVVMSLPQGSTVRSMDFHPVQQILLLVGTNMGDIMV 383 Query: 1086 WELGSRERLAYRNFKV*DIGTRLVPLQTALVKDTAISVNRVA*SPDGALFGVSYNKHIVH 907 W+LGSRERLA +NFKV ++ + + LQT+L D SVNRV SPDG LFGV+Y+KHIVH Sbjct: 384 WDLGSRERLAIKNFKVWELASCSMALQTSLANDYLASVNRVMWSPDGTLFGVAYSKHIVH 443 Query: 906 VYSYHSSDDIRHHLE 862 +YSYH+ DD+R+HLE Sbjct: 444 LYSYHNGDDLRNHLE 458 Score = 87.4 bits (215), Expect = 7e-15 Identities = 50/102 (49%), Positives = 71/102 (69%), Gaps = 1/102 (0%) Frame = -3 Query: 333 SDWRRTSSLVLYVPSM*SYFYVFFSTHI*S**VYFSFEYI-NLVQIDAHIGSVNDLVFSH 157 +D+ + + V++ P + F V +S HI Y + + + N ++I+AH+GSVNDL FS+ Sbjct: 415 NDYLASVNRVMWSPDG-TLFGVAYSKHIVHLYSYHNGDDLRNHLEIEAHVGSVNDLAFSY 473 Query: 156 PNKQLCIVSCGDDKAIKVWDAVTGAKQYMNIMFEGHEAPVLS 31 PNK LC+V+CG+D+ IKVWDA TG+KQY FEGHEAPV S Sbjct: 474 PNK-LCVVTCGEDRFIKVWDANTGSKQY---TFEGHEAPVYS 511 >ref|XP_002285341.2| PREDICTED: topless-related protein 4-like isoform 1 [Vitis vinifera] gi|297738983|emb|CBI28228.3| unnamed protein product [Vitis vinifera] Length = 1133 Score = 172 bits (436), Expect = 2e-40 Identities = 88/135 (65%), Positives = 105/135 (77%) Frame = -3 Query: 1266 LPVAYDIHWPKHAQSLFSSDELPKNVVTSLNQGSVVRSMDFHPVQ*TLLLVETNVGDIVV 1087 LPVAY H QS +SSD+LPK VV SL QGS VRSMDFHPVQ LLLV TN+GDI+V Sbjct: 326 LPVAYT--GQSHGQSSYSSDDLPKTVVMSLPQGSTVRSMDFHPVQQILLLVGTNMGDIMV 383 Query: 1086 WELGSRERLAYRNFKV*DIGTRLVPLQTALVKDTAISVNRVA*SPDGALFGVSYNKHIVH 907 W+LGSRERLA +NFKV ++ + + LQT+L D SVNRV SPDG LFGV+Y+KHIVH Sbjct: 384 WDLGSRERLAIKNFKVWELASCSMALQTSLANDYLASVNRVMWSPDGTLFGVAYSKHIVH 443 Query: 906 VYSYHSSDDIRHHLE 862 +YSYH+ DD+R+HLE Sbjct: 444 LYSYHNGDDLRNHLE 458 Score = 107 bits (267), Expect = 7e-21 Identities = 58/112 (51%), Positives = 81/112 (72%), Gaps = 1/112 (0%) Frame = -3 Query: 333 SDWRRTSSLVLYVPSM*SYFYVFFSTHI*S**VYFSFEYI-NLVQIDAHIGSVNDLVFSH 157 +D+ + + V++ P + F V +S HI Y + + + N ++I+AH+GSVNDL FS+ Sbjct: 415 NDYLASVNRVMWSPDG-TLFGVAYSKHIVHLYSYHNGDDLRNHLEIEAHVGSVNDLAFSY 473 Query: 156 PNKQLCIVSCGDDKAIKVWDAVTGAKQYMNIMFEGHEAPVLSVCPHYKENIE 1 PNK LC+V+CG+D+ IKVWDA TG+KQY FEGHEAPV SVCPH+KENI+ Sbjct: 474 PNK-LCVVTCGEDRFIKVWDANTGSKQY---TFEGHEAPVYSVCPHHKENIQ 521 >ref|XP_002324641.1| predicted protein [Populus trichocarpa] gi|222866075|gb|EEF03206.1| predicted protein [Populus trichocarpa] Length = 1126 Score = 172 bits (435), Expect = 2e-40 Identities = 86/135 (63%), Positives = 104/135 (77%) Frame = -3 Query: 1266 LPVAYDIHWPKHAQSLFSSDELPKNVVTSLNQGSVVRSMDFHPVQ*TLLLVETNVGDIVV 1087 +P+AY H Q+ +SSD+LPKN V +LNQGS V+SMDFHPVQ LLLV TN+G+++V Sbjct: 317 MPMAYTSQ--NHGQNSYSSDDLPKNPVMALNQGSAVKSMDFHPVQQILLLVGTNMGEVMV 374 Query: 1086 WELGSRERLAYRNFKV*DIGTRLVPLQTALVKDTAISVNRVA*SPDGALFGVSYNKHIVH 907 WELGSRER+A RNFKV D+ R LQ +L D SVNRVA SPDG LFGV+Y+KHI+H Sbjct: 375 WELGSRERIAGRNFKVWDLNARSRALQASLSNDYTASVNRVAWSPDGTLFGVAYSKHIMH 434 Query: 906 VYSYHSSDDIRHHLE 862 VYSYH DDIR+HLE Sbjct: 435 VYSYHGGDDIRNHLE 449 Score = 97.1 bits (240), Expect = 9e-18 Identities = 48/93 (51%), Positives = 66/93 (70%), Gaps = 1/93 (1%) Frame = -3 Query: 276 FYVFFSTHI*S**VYFSFEYI-NLVQIDAHIGSVNDLVFSHPNKQLCIVSCGDDKAIKVW 100 F V +S HI Y + I N +++DAH G+VNDL F++PNKQL +V+CGDD+ I+VW Sbjct: 424 FGVAYSKHIMHVYSYHGGDDIRNHLEMDAHNGNVNDLAFAYPNKQLVVVTCGDDRTIRVW 483 Query: 99 DAVTGAKQYMNIMFEGHEAPVLSVCPHYKENIE 1 DA+ G + + F GH+APV SVCPH+KENI+ Sbjct: 484 DAIVGTRLF---NFVGHDAPVYSVCPHHKENIQ 513 >ref|XP_002527178.1| WD-repeat protein, putative [Ricinus communis] gi|223533443|gb|EEF35191.1| WD-repeat protein, putative [Ricinus communis] Length = 1134 Score = 170 bits (430), Expect = 8e-40 Identities = 84/135 (62%), Positives = 105/135 (77%) Frame = -3 Query: 1266 LPVAYDIHWPKHAQSLFSSDELPKNVVTSLNQGSVVRSMDFHPVQ*TLLLVETNVGDIVV 1087 LPVAY H QS +SSD+LPK +V +LNQGS V+SMDFHPVQ LLLV T++GD++V Sbjct: 325 LPVAYSSQ--NHGQSSYSSDDLPKTLVMALNQGSAVKSMDFHPVQQILLLVGTSMGDVMV 382 Query: 1086 WELGSRERLAYRNFKV*DIGTRLVPLQTALVKDTAISVNRVA*SPDGALFGVSYNKHIVH 907 WELGSRER+A +NFKV ++G R V LQ +L D SVNRV SPDGALFGV+Y+KHIVH Sbjct: 383 WELGSRERIALKNFKVWELGARSVGLQASLTNDYTASVNRVLWSPDGALFGVAYSKHIVH 442 Query: 906 VYSYHSSDDIRHHLE 862 +YSYH DD++++ E Sbjct: 443 LYSYHVGDDVKNYRE 457 Score = 87.0 bits (214), Expect = 9e-15 Identities = 50/112 (44%), Positives = 74/112 (66%), Gaps = 1/112 (0%) Frame = -3 Query: 333 SDWRRTSSLVLYVPSM*SYFYVFFSTHI*S**VYFSFEYI-NLVQIDAHIGSVNDLVFSH 157 +D+ + + VL+ P + F V +S HI Y + + N +I+AH GSVNDL FS+ Sbjct: 414 NDYTASVNRVLWSPDG-ALFGVAYSKHIVHLYSYHVGDDVKNYREIEAHNGSVNDLAFSY 472 Query: 156 PNKQLCIVSCGDDKAIKVWDAVTGAKQYMNIMFEGHEAPVLSVCPHYKENIE 1 ++ L ++SCG+D+ IKVWD +TG ++ FEGHEAPV SVCPH+KE+I+ Sbjct: 473 HDR-LSVISCGEDRVIKVWDPLTGNPKFT---FEGHEAPVYSVCPHHKESIQ 520