BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00014156
         (1268 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272817.1| PREDICTED: U3 small nucleolar RNA-associated...   353   7e-95
ref|XP_003549767.1| PREDICTED: U3 small nucleolar RNA-associated...   327   3e-87
ref|XP_003529637.1| PREDICTED: U3 small nucleolar RNA-associated...   322   1e-85
ref|XP_002310740.1| predicted protein [Populus trichocarpa] gi|2...   315   1e-83
ref|XP_003610453.1| U3 small nucleolar RNA-associated protein-li...   308   2e-81

>ref|XP_002272817.1| PREDICTED: U3 small nucleolar RNA-associated protein 6 homolog [Vitis
            vinifera] gi|302144122|emb|CBI23227.3| unnamed protein
            product [Vitis vinifera]
          Length = 652

 Score =  353 bits (905), Expect = 7e-95
 Identities = 178/298 (59%), Positives = 224/298 (75%), Gaps = 2/298 (0%)
 Frame = +2

Query: 2    IYEEALKYVPSAKMLSLYAKFWMDVISLEGNNTKISGSAPSNFSVEFLSDLLKVYEKAES 181
            +YEEALK++PSA M +LY KF MD I            + S  +V  LS LL VYEKAE+
Sbjct: 352  VYEEALKFLPSAVMFNLYTKFLMDAIVSREKTKNSEPFSTSEHTVGSLSHLLMVYEKAEN 411

Query: 182  MGCMTEDLAYQYISLYLRVGRLKEARTMAERLCNGKISGAVKLWILRISIEMKWITSKSS 361
            MGC+TEDLA Q++SLYL++G+L EAR +AE+ CNGK SGAV LW+LR+S+EMK++T K  
Sbjct: 412  MGCLTEDLACQHVSLYLQLGKLDEARKLAEKFCNGKFSGAVYLWLLRVSVEMKYVTRKCP 471

Query: 362  SLAKDNCLSTFEVFRNALEKVSVSEADNLWHRVIKFFSNHRAYMDKLVKIFMACIAKD-- 535
            S +K + LS FE+ RN L KV++SEA+ LW   +KFFSNH+ + DKLV I +  +AKD  
Sbjct: 472  SPSKADLLSIFELLRNILTKVAISEAEGLWLMALKFFSNHKHFFDKLVDISLVSLAKDGG 531

Query: 536  TEGGFSVSSALVNFTLQRDGIQRAREMYKRFLVLPHPSLALHRNCIELESNLAFIGDKYG 715
            +E GF +SSA+VNF LQ+DGIQ AREMYKRFL LP P L +++ CIELE NLA I DK  
Sbjct: 532  SENGFCLSSAIVNFVLQKDGIQSAREMYKRFLALPRPGLPMYKICIELELNLAAINDKDC 591

Query: 716  LVNARKLYESALTTYSQDVGLWRDYYSLENKVGTSETANGVYWRARKTLKDSSRLIDP 889
            LVNARKL+ESALTTY QD+ LW+DYYS+E K+GTSETA  V+WRARK LKD++ LI P
Sbjct: 592  LVNARKLFESALTTYDQDINLWQDYYSMEIKMGTSETAAAVHWRARKKLKDAAALIGP 649


>ref|XP_003549767.1| PREDICTED: U3 small nucleolar RNA-associated protein 6 homolog
            [Glycine max]
          Length = 649

 Score =  327 bits (839), Expect = 3e-87
 Identities = 164/300 (54%), Positives = 226/300 (75%), Gaps = 2/300 (0%)
 Frame = +2

Query: 2    IYEEALKYVPSAKMLSLYAKFWMDVISLEGNNTKISGSAPSNFSVEFLSDLLKVYEKAES 181
            +YEEALK VPS  M SLYA F  D+I+ +   T I+GS  S  +V ++S LL +YE+AES
Sbjct: 351  VYEEALKNVPSGTMFSLYANFLTDIIAPKEGETDINGS--SGCAVNYISHLLSIYERAES 408

Query: 182  MGCMTEDLAYQYISLYLRVGRLKEARTMAERLCNGKISGAVKLWILRISIEMKWITSKSS 361
            MGC+TEDLA +++SL+L++ +L EA+ +A +LC+GK++ +V+LW LRI+IE++ IT  SS
Sbjct: 409  MGCITEDLACKHVSLHLQLRQLDEAQKLAAKLCSGKLAESVELWGLRITIEIRCITGSSS 468

Query: 362  SLAKDNCLSTFEVFRNALEKVSVSEADNLWHRVIKFFSNHRAYMDKLVKIFMACIAKD-- 535
            S +  +  S FE+ +  L KVSVS ++NLW + +KF++N R Y DKLV+I +  + +D  
Sbjct: 469  SPSDADLQSLFELLQQILMKVSVSRSENLWLKALKFYANQRRYFDKLVEISVVTLVRDGG 528

Query: 536  TEGGFSVSSALVNFTLQRDGIQRAREMYKRFLVLPHPSLALHRNCIELESNLAFIGDKYG 715
            +E GFS+SSA+V+F LQ+DGIQ+ R++YKRFL LP P LAL+R CI+LE+NLA IGDK G
Sbjct: 529  SENGFSLSSAIVSFILQKDGIQKTRDIYKRFLALPLPGLALYRRCIDLETNLASIGDKDG 588

Query: 716  LVNARKLYESALTTYSQDVGLWRDYYSLENKVGTSETANGVYWRARKTLKDSSRLIDPRD 895
            L+NARKLYES+L TY Q+V LW+DYY LE K+GTSE A  +YWRARK LKD+S  +   D
Sbjct: 589  LINARKLYESSLATYDQNVSLWQDYYRLEIKMGTSEKATAIYWRARKVLKDASEFVTAPD 648


>ref|XP_003529637.1| PREDICTED: U3 small nucleolar RNA-associated protein 6 homolog
            [Glycine max]
          Length = 655

 Score =  322 bits (826), Expect = 1e-85
 Identities = 160/300 (53%), Positives = 226/300 (75%), Gaps = 2/300 (0%)
 Frame = +2

Query: 2    IYEEALKYVPSAKMLSLYAKFWMDVISLEGNNTKISGSAPSNFSVEFLSDLLKVYEKAES 181
            +YEEAL+ VPS  M  LYA F  D+++ +   T I+GS  S  +  ++S LL +YE+AES
Sbjct: 358  VYEEALENVPSGTMFCLYANFLTDIVAHKEGETNINGS--SGHAANYISHLLLIYERAES 415

Query: 182  MGCMTEDLAYQYISLYLRVGRLKEARTMAERLCNGKISGAVKLWILRISIEMKWITSKSS 361
            MGC+TEDLA +++SL+L++ +L EAR +A +LC+GK++ +V+LW LRI+IE++  T+KSS
Sbjct: 416  MGCITEDLACKHVSLHLQLRQLDEARKLAAKLCSGKLAESVELWGLRITIEIR-CTTKSS 474

Query: 362  SLAKDNCLSTFEVFRNALEKVSVSEADNLWHRVIKFFSNHRAYMDKLVKIFMACIAKD-- 535
            S +  +  S FE+ +  L KVSVS+++NLW + +KF++N R Y DKLV+I +  + +D  
Sbjct: 475  SPSDADLQSLFELLQQILMKVSVSKSENLWLKALKFYANQRQYFDKLVEISVVTLVRDGG 534

Query: 536  TEGGFSVSSALVNFTLQRDGIQRAREMYKRFLVLPHPSLALHRNCIELESNLAFIGDKYG 715
            +E GFS+S A+V+F  Q+DGIQ+ R++YKRFL LP P LAL+R+CI+LE+NLA IGDK G
Sbjct: 535  SENGFSLSFAIVSFIFQKDGIQKTRDIYKRFLALPRPGLALYRHCIDLETNLASIGDKDG 594

Query: 716  LVNARKLYESALTTYSQDVGLWRDYYSLENKVGTSETANGVYWRARKTLKDSSRLIDPRD 895
            L+NARKLYESAL TY Q+V LW+DYY +E K+GTSE AN +YWRARK LKD+S  +   D
Sbjct: 595  LINARKLYESALATYDQNVSLWQDYYRMETKMGTSEKANAIYWRARKVLKDASEFVTATD 654


>ref|XP_002310740.1| predicted protein [Populus trichocarpa] gi|222853643|gb|EEE91190.1|
            predicted protein [Populus trichocarpa]
          Length = 643

 Score =  315 bits (808), Expect = 1e-83
 Identities = 162/300 (54%), Positives = 220/300 (73%), Gaps = 2/300 (0%)
 Frame = +2

Query: 2    IYEEALKYVPSAKMLSLYAKFWMDVISLEGNNTKISGSAPSNFSVEFLSDLLKVYEKAES 181
            +YEEAL+++PS  M +LY KF MD I+ +G       S  S+ + +++S LL VYEKA+ 
Sbjct: 344  VYEEALQFLPSPMMFNLYIKFLMDAIAPKGGEN--DPSKVSSPTEDYISHLLVVYEKADV 401

Query: 182  MGCMTEDLAYQYISLYLRVGRLKEARTMAERLCNGKISGAVKLWILRISIEMKWITSKSS 361
            +G MTEDLA QY+S YL++GR  EAR +A+RLC+GK+S + KLWILR S+E+K  T  +S
Sbjct: 402  VGYMTEDLACQYVSFYLQLGRFDEARKLADRLCSGKLSDSEKLWILRASMEIKSFTDDTS 461

Query: 362  SLAKDNCLSTFEVFRNALEKVSVSEADNLWHRVIKFFSNHRAYMDKLVKIFMACIAKD-- 535
            + +KD+      + R+AL KVS+S+A++LW   +  F+  + Y+DKLV+I +  +AKD  
Sbjct: 462  APSKDDFQYVLGLLRSALTKVSISQAEDLWLMALNVFAKQKKYLDKLVEISLISVAKDGG 521

Query: 536  TEGGFSVSSALVNFTLQRDGIQRAREMYKRFLVLPHPSLALHRNCIELESNLAFIGDKYG 715
            ++ GFS+SSA+VNF LQ+DGI +AR+ YKRFL LPHP L L+R CIELE NLA +GDK  
Sbjct: 522  SDDGFSLSSAIVNFMLQKDGIHKARKTYKRFLALPHPGLVLYRCCIELEVNLASVGDKDC 581

Query: 716  LVNARKLYESALTTYSQDVGLWRDYYSLENKVGTSETANGVYWRARKTLKDSSRLIDPRD 895
            L NARKLYESAL TY QDV LW++Y+S+E K+GTSETAN V WRARKTLK+S+  +   D
Sbjct: 582  LANARKLYESALATYGQDVTLWQNYHSMEIKLGTSETANAVCWRARKTLKNSAAFVAAPD 641


>ref|XP_003610453.1| U3 small nucleolar RNA-associated protein-like protein [Medicago
            truncatula] gi|355511508|gb|AES92650.1| U3 small
            nucleolar RNA-associated protein-like protein [Medicago
            truncatula]
          Length = 647

 Score =  308 bits (789), Expect = 2e-81
 Identities = 160/301 (53%), Positives = 217/301 (72%), Gaps = 3/301 (0%)
 Frame = +2

Query: 2    IYEEALKYVPSAKMLSLYAKFWMDVISLEGNNTKISGSAPSNFSVEFLSDLLKVYEKAES 181
            +YEEALK VPS  M SLYA F M +++ +     I G         ++S LL +YE+AES
Sbjct: 354  VYEEALKSVPSGTMFSLYANFLMGIVAPKDEEPNIDGP--------YISHLLSIYERAES 405

Query: 182  MGCMTEDLAYQYISLYLRVGRLKEARTMAERLCNGKISGAVKLWILRISIEMKWITSKSS 361
            MG +T+DLA +++SL+L++  L EAR +  +LC+GK++ +V+LW LR+SIE+  IT +SS
Sbjct: 406  MGIITDDLACKHVSLHLQLRHLDEARKLVAKLCSGKLAESVQLWELRVSIEITCIT-QSS 464

Query: 362  SLAKDNCLST-FEVFRNALEKVSVSEADNLWHRVIKFFSNHRAYMDKLVKIFMACIAKD- 535
             L  D  LS+ FE+ R  L K  VS+++NLW R +KF+++HR Y DKLV+I +  +A+D 
Sbjct: 465  LLPSDTDLSSLFELLRQILTKFHVSKSENLWLRALKFYASHRRYFDKLVEISVLSLARDG 524

Query: 536  -TEGGFSVSSALVNFTLQRDGIQRAREMYKRFLVLPHPSLALHRNCIELESNLAFIGDKY 712
             +E GFS+SSA+V+F LQ+DGI +AR++YKR+L LPHP LAL+R CIELE+NLA  GDK 
Sbjct: 525  GSESGFSLSSAIVSFILQKDGIHKARDIYKRYLALPHPGLALYRKCIELEANLASTGDKN 584

Query: 713  GLVNARKLYESALTTYSQDVGLWRDYYSLENKVGTSETANGVYWRARKTLKDSSRLIDPR 892
             LVNARKLYESAL TY Q+V  W+DYY +E K+GTS+ A  VYWRARK LKD+S  I   
Sbjct: 585  SLVNARKLYESALATYDQNVDFWQDYYRMEVKMGTSQQATAVYWRARKILKDASEFIASP 644

Query: 893  D 895
            D
Sbjct: 645  D 645