BLASTX nr result

ID: Coptis25_contig00014155 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00014155
         (1698 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002509949.1| Polygalacturonase precursor, putative [Ricin...   695   0.0  
ref|XP_003551949.1| PREDICTED: probable polygalacturonase-like [...   689   0.0  
ref|XP_003530711.1| PREDICTED: probable polygalacturonase-like [...   686   0.0  
emb|CBI34471.3| unnamed protein product [Vitis vinifera]              680   0.0  
ref|XP_003545367.1| PREDICTED: probable polygalacturonase-like [...   677   0.0  

>ref|XP_002509949.1| Polygalacturonase precursor, putative [Ricinus communis]
            gi|223549848|gb|EEF51336.1| Polygalacturonase precursor,
            putative [Ricinus communis]
          Length = 446

 Score =  695 bits (1794), Expect = 0.0
 Identities = 327/388 (84%), Positives = 359/388 (92%)
 Frame = -3

Query: 1426 TCSGIVPMKYRNDAISITDFGGVGDGRTLNTKAFQEAIYRIEHLKRRGGTVLYIPQGVFL 1247
            TCSGIVPM+YRND ISI DFGGVGDG+T+NTKAF+ AIYRI+HLKRRGGT+LYIP GVFL
Sbjct: 28   TCSGIVPMRYRNDKISIADFGGVGDGKTVNTKAFRAAIYRIQHLKRRGGTLLYIPPGVFL 87

Query: 1246 TGSFNLTSHMTLYLSKGAVIKATQDSSNWPLVAPLPSYGRGRELPGGRYMSFIHGDGLHD 1067
            TGSFNLTSHMTLYL++GAVIKATQD+ NWPL+APLPSYGRGRE  GGRYMSFIHGDGLHD
Sbjct: 88   TGSFNLTSHMTLYLARGAVIKATQDTWNWPLIAPLPSYGRGRERLGGRYMSFIHGDGLHD 147

Query: 1066 VIITGENGTIDGQGDVWWNMWKQRTLQFTRPHLVEFMNCRNIIISNVIFQNSPFWNIHPV 887
            V+ITGENGTIDGQGD+WWNMW+QRTLQFTRP+LVEF+N R IIISNVIFQNSPFWNIHPV
Sbjct: 148  VVITGENGTIDGQGDIWWNMWRQRTLQFTRPNLVEFLNSRGIIISNVIFQNSPFWNIHPV 207

Query: 886  YCSNVVIRHVTILAPADSPNTDGIDPDSSSHVCIEDSYIATGDDLVAVKSGWDEYGIQYG 707
            YCSNVVIR VTILAP DSPNTDGIDPDSSS+VCIEDSYI+TGDDLVAVKSGWDEYGI YG
Sbjct: 208  YCSNVVIRFVTILAPHDSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYG 267

Query: 706  RRSHGITIRRVTGSSPFAGIAIGSETSGGVEDVLAENINLFNMGLGIHVKTNIGRGGFIK 527
            R S  ITIRR+TGSSPFAGIA+GSETSGGVE VLAENINL++MG+G+HVKTNIGRGGFI+
Sbjct: 268  RPSSHITIRRITGSSPFAGIAVGSETSGGVEHVLAENINLYDMGVGLHVKTNIGRGGFIR 327

Query: 526  NITISDVYIENARKGIKIAGDVGDHPDDKFDPNALPVVTGVTIRNVWGVKVQQAGSIQGL 347
            NIT SDVY++NARKGIKIAGDVGDHPDD ++PNALPVV G+  R VWG  V Q G+IQGL
Sbjct: 328  NITFSDVYMKNARKGIKIAGDVGDHPDDNYNPNALPVVKGIIFRGVWGENVLQPGAIQGL 387

Query: 346  KNSPFTGICLSNINLHGVTGPGTPPWKC 263
            K+SPFTGICLSNINLHGV GP + PWKC
Sbjct: 388  KSSPFTGICLSNINLHGVPGPRSTPWKC 415


>ref|XP_003551949.1| PREDICTED: probable polygalacturonase-like [Glycine max]
          Length = 442

 Score =  689 bits (1777), Expect = 0.0
 Identities = 320/388 (82%), Positives = 361/388 (93%)
 Frame = -3

Query: 1426 TCSGIVPMKYRNDAISITDFGGVGDGRTLNTKAFQEAIYRIEHLKRRGGTVLYIPQGVFL 1247
            TCS IVP++YR+D ISITDFGGVGDGRTLNTKAF+ A+YRI+HL+RRGGTVLY+P GV+L
Sbjct: 27   TCSNIVPLRYRSDRISITDFGGVGDGRTLNTKAFRAAVYRIQHLRRRGGTVLYVPPGVYL 86

Query: 1246 TGSFNLTSHMTLYLSKGAVIKATQDSSNWPLVAPLPSYGRGRELPGGRYMSFIHGDGLHD 1067
            T SFNLTSHMTLYL+ GAVIKATQ+  NWPL+ PLPSYGRGRELPGGRYMSFIHGDGL D
Sbjct: 87   TESFNLTSHMTLYLAAGAVIKATQELGNWPLIVPLPSYGRGRELPGGRYMSFIHGDGLSD 146

Query: 1066 VIITGENGTIDGQGDVWWNMWKQRTLQFTRPHLVEFMNCRNIIISNVIFQNSPFWNIHPV 887
            V+ITGENGTIDGQGDVWWNMW+QRTLQFTRP+LVEF+N ++IIISNVIF+NSPFWNIHPV
Sbjct: 147  VVITGENGTIDGQGDVWWNMWRQRTLQFTRPNLVEFVNSQDIIISNVIFKNSPFWNIHPV 206

Query: 886  YCSNVVIRHVTILAPADSPNTDGIDPDSSSHVCIEDSYIATGDDLVAVKSGWDEYGIQYG 707
            YCSNVV+R+VTILAP DSPNTDGIDPDSSS+VCIEDSYI+TGDDLVAVKSGWDEYGI YG
Sbjct: 207  YCSNVVVRYVTILAPRDSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYG 266

Query: 706  RRSHGITIRRVTGSSPFAGIAIGSETSGGVEDVLAENINLFNMGLGIHVKTNIGRGGFIK 527
            R S+GITIRRVTGSSPFAGIAIGSETSGGVE+VLAE+INLFNMG+GIH+KTN GRGG IK
Sbjct: 267  RPSYGITIRRVTGSSPFAGIAIGSETSGGVENVLAEHINLFNMGVGIHIKTNSGRGGLIK 326

Query: 526  NITISDVYIENARKGIKIAGDVGDHPDDKFDPNALPVVTGVTIRNVWGVKVQQAGSIQGL 347
            NIT++ VY+ENAR+GIKIAGDVG HPD+KF+PNALPVV G+TI+NVWGVKV QAG I GL
Sbjct: 327  NITVAHVYVENARQGIKIAGDVGGHPDEKFNPNALPVVKGITIKNVWGVKVNQAGLIHGL 386

Query: 346  KNSPFTGICLSNINLHGVTGPGTPPWKC 263
            +NSPFT +CLS+IN HG+ GP +P WKC
Sbjct: 387  RNSPFTDVCLSDINFHGMEGPRSPSWKC 414


>ref|XP_003530711.1| PREDICTED: probable polygalacturonase-like [Glycine max]
          Length = 474

 Score =  686 bits (1771), Expect = 0.0
 Identities = 318/388 (81%), Positives = 361/388 (93%)
 Frame = -3

Query: 1426 TCSGIVPMKYRNDAISITDFGGVGDGRTLNTKAFQEAIYRIEHLKRRGGTVLYIPQGVFL 1247
            TCS IV ++YR+D IS+TDFGGVGDGRTLNTKAF+ A+YRI+HL+RRGGTVLY+P GV+L
Sbjct: 59   TCSNIVSLRYRSDRISVTDFGGVGDGRTLNTKAFRAAVYRIQHLRRRGGTVLYVPPGVYL 118

Query: 1246 TGSFNLTSHMTLYLSKGAVIKATQDSSNWPLVAPLPSYGRGRELPGGRYMSFIHGDGLHD 1067
            T SFNLTSHMTLYL+ GAVIKATQ+  NWPL+APLPSYGRGRELPGGRYMSFIHGDGL D
Sbjct: 119  TESFNLTSHMTLYLAAGAVIKATQELGNWPLIAPLPSYGRGRELPGGRYMSFIHGDGLSD 178

Query: 1066 VIITGENGTIDGQGDVWWNMWKQRTLQFTRPHLVEFMNCRNIIISNVIFQNSPFWNIHPV 887
            V+ITGENGTIDGQGDVWWNMW+QRTLQFTRP+LVEF+N ++IIISNVIF+NSPFWNIHPV
Sbjct: 179  VVITGENGTIDGQGDVWWNMWRQRTLQFTRPNLVEFVNSQDIIISNVIFKNSPFWNIHPV 238

Query: 886  YCSNVVIRHVTILAPADSPNTDGIDPDSSSHVCIEDSYIATGDDLVAVKSGWDEYGIQYG 707
            YCSNVV+R+VTILAP DSPNTDGIDPDSSS+VCIEDSYI+TGDDLVAVKSGWDEYGI YG
Sbjct: 239  YCSNVVVRYVTILAPRDSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYG 298

Query: 706  RRSHGITIRRVTGSSPFAGIAIGSETSGGVEDVLAENINLFNMGLGIHVKTNIGRGGFIK 527
            R S+GITIRR+TGSSPFAGIAIGSETSGGVE+VLAE+INLFNMG+GIH+KTN GRGG IK
Sbjct: 299  RPSYGITIRRLTGSSPFAGIAIGSETSGGVENVLAEHINLFNMGVGIHIKTNSGRGGLIK 358

Query: 526  NITISDVYIENARKGIKIAGDVGDHPDDKFDPNALPVVTGVTIRNVWGVKVQQAGSIQGL 347
            NIT++ VY+ENAR+GIKIAGDVG HPD+KF+PNALPVV G+TI+NVWGV+V QAG I GL
Sbjct: 359  NITVAHVYVENARQGIKIAGDVGGHPDEKFNPNALPVVKGITIKNVWGVRVNQAGLIHGL 418

Query: 346  KNSPFTGICLSNINLHGVTGPGTPPWKC 263
            +NSPFT +CLSNIN HG+ GP +P WKC
Sbjct: 419  RNSPFTDVCLSNINFHGMRGPRSPSWKC 446


>emb|CBI34471.3| unnamed protein product [Vitis vinifera]
          Length = 447

 Score =  680 bits (1754), Expect = 0.0
 Identities = 321/395 (81%), Positives = 359/395 (90%)
 Frame = -3

Query: 1447 LVYGEMVTCSGIVPMKYRNDAISITDFGGVGDGRTLNTKAFQEAIYRIEHLKRRGGTVLY 1268
            LV    VTCSGIVPM++RND ISI DFGGVGDG+TLNTKAF+ AIYRIEHL+RRGGT+LY
Sbjct: 22   LVLAGDVTCSGIVPMRHRNDVISIKDFGGVGDGKTLNTKAFRAAIYRIEHLRRRGGTLLY 81

Query: 1267 IPQGVFLTGSFNLTSHMTLYLSKGAVIKATQDSSNWPLVAPLPSYGRGRELPGGRYMSFI 1088
            IP GV+LT SFNLTSHMTLYLSK AVI+ATQD+ +WPL+APLPSYGRGRELPGGRYMSFI
Sbjct: 82   IPPGVYLTESFNLTSHMTLYLSKDAVIRATQDTGSWPLIAPLPSYGRGRELPGGRYMSFI 141

Query: 1087 HGDGLHDVIITGENGTIDGQGDVWWNMWKQRTLQFTRPHLVEFMNCRNIIISNVIFQNSP 908
            H DG+HDVIITGENGTIDGQG+VWWNMW+QRTLQFTRP+L+E +N RNIIISNVIF++SP
Sbjct: 142  HADGVHDVIITGENGTIDGQGEVWWNMWRQRTLQFTRPNLIELINSRNIIISNVIFRDSP 201

Query: 907  FWNIHPVYCSNVVIRHVTILAPADSPNTDGIDPDSSSHVCIEDSYIATGDDLVAVKSGWD 728
            FWNIHPVYC NVV++ VTILAP DSPNTDGIDPDSSS+VCIEDSYI+TGDDLVAVKSGWD
Sbjct: 202  FWNIHPVYCRNVVVQFVTILAPHDSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWD 261

Query: 727  EYGIQYGRRSHGITIRRVTGSSPFAGIAIGSETSGGVEDVLAENINLFNMGLGIHVKTNI 548
            EYGI YGR S GITIRR+TGSSPFAGIA+GSETSGGV++V AE+INL+NMG+GIH+KTNI
Sbjct: 262  EYGIAYGRPSSGITIRRITGSSPFAGIAVGSETSGGVQNVFAEHINLYNMGVGIHLKTNI 321

Query: 547  GRGGFIKNITISDVYIENARKGIKIAGDVGDHPDDKFDPNALPVVTGVTIRNVWGVKVQQ 368
            GRGG I+NIT+S+VY+E AR GIKIAGDVGDHPDD F+PNALPVV GV IR+VWG+ V Q
Sbjct: 322  GRGGVIRNITVSNVYMEKARTGIKIAGDVGDHPDDNFNPNALPVVKGVVIRDVWGLDVLQ 381

Query: 367  AGSIQGLKNSPFTGICLSNINLHGVTGPGTPPWKC 263
             GSI GLKNSPFTGICLS INLHG   PGT PWKC
Sbjct: 382  PGSIIGLKNSPFTGICLSKINLHGKIKPGTAPWKC 416


>ref|XP_003545367.1| PREDICTED: probable polygalacturonase-like [Glycine max]
          Length = 446

 Score =  677 bits (1747), Expect = 0.0
 Identities = 320/399 (80%), Positives = 359/399 (89%), Gaps = 3/399 (0%)
 Frame = -3

Query: 1450 WLVY---GEMVTCSGIVPMKYRNDAISITDFGGVGDGRTLNTKAFQEAIYRIEHLKRRGG 1280
            WL+    GE  +CS IV + +R D ISIT+FGGVGDGRTLNTKAF+EAIYR++HL R GG
Sbjct: 18   WLLVLGEGETASCSNIVALGHRTDNISITEFGGVGDGRTLNTKAFREAIYRVQHLPREGG 77

Query: 1279 TVLYIPQGVFLTGSFNLTSHMTLYLSKGAVIKATQDSSNWPLVAPLPSYGRGRELPGGRY 1100
            T+LY+P GV+LT  FNLTSHMTLYL+ GAVI ATQDS NWPL+APLPSYGRGRE PGGRY
Sbjct: 78   TLLYVPPGVYLTEPFNLTSHMTLYLAAGAVIMATQDSLNWPLIAPLPSYGRGRERPGGRY 137

Query: 1099 MSFIHGDGLHDVIITGENGTIDGQGDVWWNMWKQRTLQFTRPHLVEFMNCRNIIISNVIF 920
            MSFIHGDG+ DV+ITGENGTIDGQGD WWN W+Q TLQFTRP+LVEF+N R+IIISNVIF
Sbjct: 138  MSFIHGDGVQDVVITGENGTIDGQGDAWWNKWRQGTLQFTRPNLVEFVNSRDIIISNVIF 197

Query: 919  QNSPFWNIHPVYCSNVVIRHVTILAPADSPNTDGIDPDSSSHVCIEDSYIATGDDLVAVK 740
            +NSPFWNIHPVYCSNVV+R+VTILAP DSPNTDGIDPDSSS+VCIEDSYI+TGDDLVAVK
Sbjct: 198  KNSPFWNIHPVYCSNVVVRYVTILAPRDSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVK 257

Query: 739  SGWDEYGIQYGRRSHGITIRRVTGSSPFAGIAIGSETSGGVEDVLAENINLFNMGLGIHV 560
            SGWDEYGI YGR S  ITIRR+TGSSPFAGIAIGSETSGGVE+VLAE+INL+NMG+GIH+
Sbjct: 258  SGWDEYGIAYGRPSSDITIRRITGSSPFAGIAIGSETSGGVENVLAEHINLYNMGIGIHI 317

Query: 559  KTNIGRGGFIKNITISDVYIENARKGIKIAGDVGDHPDDKFDPNALPVVTGVTIRNVWGV 380
            KTN GRGGFIKNIT+S VY+E ARKGI+I+GDVGDHPDDKFD NALP+V GVTI+NVWG+
Sbjct: 318  KTNTGRGGFIKNITMSHVYMEEARKGIRISGDVGDHPDDKFDANALPLVKGVTIKNVWGM 377

Query: 379  KVQQAGSIQGLKNSPFTGICLSNINLHGVTGPGTPPWKC 263
            KV QAG IQGL+NSPFT ICL +INLHGVTGP TPPWKC
Sbjct: 378  KVLQAGLIQGLRNSPFTDICLYDINLHGVTGPRTPPWKC 416


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