BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00014148
         (3764 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263027.2| PREDICTED: uncharacterized protein LOC100265...  1055   0.0  
emb|CAN82215.1| hypothetical protein VITISV_020421 [Vitis vinifera]  1045   0.0  
ref|XP_003547135.1| PREDICTED: uncharacterized protein LOC100805...   967   0.0  
ref|XP_003593498.1| Helicase-like transcription factor [Medicago...   943   0.0  
ref|XP_002317230.1| chromatin remodeling complex subunit [Populu...   941   0.0  

>ref|XP_002263027.2| PREDICTED: uncharacterized protein LOC100265351 [Vitis vinifera]
          Length = 1430

 Score = 1055 bits (2729), Expect = 0.0
 Identities = 589/943 (62%), Positives = 668/943 (70%), Gaps = 46/943 (4%)
 Frame = +2

Query: 1073 ISQGSSFKHEASSHCLPTGIGSSRHASKN---LLPGFPSFIPMKKELVCVDDDRMGEVHA 1243
            I Q +    EA +     G+ +   A KN   +L  FP FI  KK L    D+      A
Sbjct: 442  ICQPNEVVDEAVNDRFSLGVDARVFADKNSRQMLSCFPPFISSKKNLFDAKDENEDLYLA 501

Query: 1244 SK----------SACFRSATLEGYCSDEAPSHSVPDTQSVFLPGPNVP-IKEEKKTEVV- 1387
            SK              RS +  G   D      +P  +   +    +  IK+EK+ +++ 
Sbjct: 502  SKRPRHCQVIGDELSGRSQSGGGPL-DTVSEQLIPSVKQSTVSNKQLDYIKDEKEGKLIQ 560

Query: 1388 PHRYTDYHVKVNGVIKGNHSVD-RSNVDDEADVCILEDISDPRTQPLGRVHEKSPITAQR 1564
            P     Y  KV+     ++S+D RS++DD+ D+CILEDIS+P       +  KS ++ QR
Sbjct: 561  PKSMGSYLSKVSPESIQSNSLDHRSHIDDDTDICILEDISEPVRSNSSLLLGKSLVSTQR 620

Query: 1565 VVYDPLYHIGIGNTRVKAFDERITLRVALQDLSQPKSESSPPDGTLAVSLLRHQRIALSW 1744
               D L++ G+   R +  DER+  RVALQDLSQPKSE+SPPDG L V LLRHQRIALSW
Sbjct: 621  YS-DSLHNTGVVGMRNRTNDERLIFRVALQDLSQPKSEASPPDGVLTVPLLRHQRIALSW 679

Query: 1745 MVQKETASLHCSGGILADDQGLGKTISTIALILKERPPSSKATSVTVKQNE--------- 1897
            MVQKETASLHCSGGILADDQGLGKT+STIALILKERP SS+A    +KQ+E         
Sbjct: 680  MVQKETASLHCSGGILADDQGLGKTVSTIALILKERPTSSRACQEDMKQSELETLNLDED 739

Query: 1898 ----PKAXXXXXXXXXXXXXXXGMKIKSENASMLAKGRPAAGTLVVCPTSVLRQWSDELH 2065
                P+                G  +K ENA +  KGRPAAGTLVVCPTSVLRQW++EL 
Sbjct: 740  DDKVPELDGTKQAADSCEVMSHGSSMKKENAFVQGKGRPAAGTLVVCPTSVLRQWAEELR 799

Query: 2066 SKVSKEANLSVLVYHGSNRTKDPFELAKYDVVVTTYSIVSMEVPKQPLVDKDDDEKGQPE 2245
            SKV+ +ANLSVLVYHGSNRTKDP ELA+YDVV+TTYSIVSMEVPKQPLVDKDD+EK +PE
Sbjct: 800  SKVTSKANLSVLVYHGSNRTKDPCELARYDVVLTTYSIVSMEVPKQPLVDKDDEEKVKPE 859

Query: 2246 GHGLESMEFSYNKKRKYPPSADXXXXXXXXXXXXXXXXXITRPLARVGWFRVVLDEAQSI 2425
             H +   E S NKKRKYPPS+D                 + RPLARVGWFRVVLDEAQSI
Sbjct: 860  AH-VSPTELSSNKKRKYPPSSDKKCLKDKKAMDGALLESVARPLARVGWFRVVLDEAQSI 918

Query: 2426 KNHRTQVARACWGLRAKRRWCLSGTPIQNAIDDLYSYFRFLRYDPYAAYKSFCSMIKVPI 2605
            KNHRTQVARACWGLRAKRRWCLSGTPIQNA+DDLYSYFRFLRYDPYA YKSFCS IKVPI
Sbjct: 919  KNHRTQVARACWGLRAKRRWCLSGTPIQNAVDDLYSYFRFLRYDPYAVYKSFCSTIKVPI 978

Query: 2606 SRNPTNGYKKLQAVLKTIMLRRTKGSLLDGEPIINLPPKSVELKRVDFSMEERGFYSKLE 2785
            +RNPTNGY+KLQAVLKTIMLRRTKG+LLDGEPII LPPKSVELK+VDFS EER FYS+LE
Sbjct: 979  TRNPTNGYRKLQAVLKTIMLRRTKGTLLDGEPIITLPPKSVELKKVDFSKEERDFYSRLE 1038

Query: 2786 ADSRDQFKVYAAAGTVKQNYVNILLMLLRLRQACDHPLLVKGYDSNSVLRSSVEKAKELA 2965
            ADSR QF+VYAAAGTVKQNYVNILLMLLRLRQACDHPLLVKGY+SNSV RSSVE AK+L+
Sbjct: 1039 ADSRAQFEVYAAAGTVKQNYVNILLMLLRLRQACDHPLLVKGYNSNSVWRSSVEMAKKLS 1098

Query: 2966 GEKQLELLNCLEARSDICGICNDPPEDAVVTICGHVFCNQCILEHLTGDENLCPAAQCKV 3145
             EKQ+ LLNCLE    ICGICNDPPEDAVV+ICGHVFCNQCI EHLT DEN CP+  CKV
Sbjct: 1099 REKQIYLLNCLEGSLAICGICNDPPEDAVVSICGHVFCNQCICEHLTSDENQCPSTNCKV 1158

Query: 3146 HLNITSVFSRNALRSSL------------FGQTNLENHASQPDETLVACSKGPSDSSKIK 3289
             LN++SVFS+  L+SSL             G   +E H   P+  L        DSSKI+
Sbjct: 1159 QLNVSSVFSKATLKSSLSDLPVQDISHHCSGSELVEAHDPCPESRLY-------DSSKIR 1211

Query: 3290 AALEVLQSLSKPWHYTSKDSTISSINEVGPCPVNASDPHIEDRRHDIETGSN-----DSI 3454
            AALEVLQSLSKP   T  +S++ S NE      N SD H E    +     N      SI
Sbjct: 1212 AALEVLQSLSKPRDCTLGNSSLKSSNETTSGLENLSDSHSEGLLKETCDEKNVVLDKGSI 1271

Query: 3455 VKVSEKAIVFSQWTRMLDLLEVHLKTSSIQYRRLDGTMSVVARDKAVKDFNAIPEVTVMI 3634
              V EKAIVFSQWTRMLDLLE  LK SSIQYRRLDGTMSVVARDKAVKDFN +PEV+VMI
Sbjct: 1272 TVVGEKAIVFSQWTRMLDLLESCLKNSSIQYRRLDGTMSVVARDKAVKDFNTLPEVSVMI 1331

Query: 3635 MSLKAASLGLNMVAACHVILLDLWWNPTTEDQAIDRAHRIGQT 3763
            MSLKAASLGLNMVAACHV+LLDLWWNPTTEDQAIDRAHRIGQT
Sbjct: 1332 MSLKAASLGLNMVAACHVLLLDLWWNPTTEDQAIDRAHRIGQT 1374



 Score =  113 bits (283), Expect = 3e-22
 Identities = 106/380 (27%), Positives = 176/380 (46%), Gaps = 26/380 (6%)
 Frame = +2

Query: 182  HSGNMILSNPMAQTGSEEMFEFPELSGKIFDEGEVDSV--SSPLRTCSVSLTDWSTMSCV 355
            HS N   S+ + + GS+ +FE       I +  ++ S    SP+R+ S SL DW  +S V
Sbjct: 86   HSFNSEASHSITR-GSDGLFE--SAGNSIIECAKLPSAHAGSPVRSGSGSLNDW--ISHV 140

Query: 356  ENDTCSSRERDGVGMNAPLYN-FDRTFTPTHVPSCNATFNFASGDSSGSTDHVNLVDLKN 532
                   +ER GV  +A  YN  D       +P+C+  F+FA+G+S+ ++D+ N +DL +
Sbjct: 141  SGQETCCKERSGVSQDALSYNRVDSKEIQYEIPNCSTAFSFAAGNSNYASDYTNGLDLNH 200

Query: 533  ---EEENEFRHTGGVSHSQCASHFPVVEESDLAFRSHTDLFGNGFENPGALERSLPTL-- 697
               + E +F+H G   HS+ AS+  V E SD+   S+            A+E+S   L  
Sbjct: 201  LNGDTEAQFKHMGVEIHSEYASNSMVTENSDIGLGSYEP----------AIEKSTGDLVT 250

Query: 698  -------NAEIAFIDSETCLVHPHLTEINGSQVSDIHFEGNEIYSEQSSC--GRSTTFSD 850
                   +  I+  D++      + TE +  Q+ D+ +E +E YS    C     + FSD
Sbjct: 251  GGKYSCTSMTISLRDADISSHDVNHTESSICQIPDVVYENSEDYSAVQYCLSADGSLFSD 310

Query: 851  GTVTDSSKKTPHYFSFPFMEIKEENMTCQEDLVEDQILSSQTICTTTNTYLEEEAKPQIS 1030
                 SS+  P  F   FM   EE +   +D  E++ LS++  C  +   L ++A+    
Sbjct: 311  ----PSSQYMPDCFDLQFMPSSEEMLINMKD--ENEELSAENTCLNSKMNLSQDARASSF 364

Query: 1031 LSTKASVVDCSNRSISQGSSFKHEASSHCLPTGIGSSRHA---------SKNLLPGFPSF 1183
            +         +N S  +G +F HE S++  PT   SS +A         S  L     S+
Sbjct: 365  VQK-----GLNNYSDVKGLNFNHEGSNYVSPTSGNSSSNAGYGSNDDIRSIQLSTCSQSY 419

Query: 1184 IPMKKELVCVDDDRMGEVHA 1243
            +  K+  +C+ D+R  E+ A
Sbjct: 420  MSNKRRAICIKDERKDELVA 439


>emb|CAN82215.1| hypothetical protein VITISV_020421 [Vitis vinifera]
          Length = 1435

 Score = 1045 bits (2703), Expect = 0.0
 Identities = 658/1318 (49%), Positives = 792/1318 (60%), Gaps = 124/1318 (9%)
 Frame = +2

Query: 182  HSGNMILSNPMAQTGSEEMFEFPELSGKIFDEGEVDSV--SSPLRTCSVSLTDWSTMSCV 355
            HS N   S+ + + GS+ +FE       I +  ++ S    SP+R+ S SL DW  +S V
Sbjct: 90   HSFNSEASHSITR-GSDGLFE--SAGNSIIECAKLPSAHAGSPVRSGSGSLNDW--ISHV 144

Query: 356  ENDTCSSRERDGVGMNAPLYN-FDRTFTPTHVPSCNATFNFASGDSSGSTDHVNLVDLKN 532
                   +ER GV  +A LYN  D       +P+C+  F+FA+G+S+ ++D+ N +DL +
Sbjct: 145  SGQETCCKERSGVSQDALLYNRVDSKEIQYEIPNCSTAFSFAAGNSNYASDYTNGLDLNH 204

Query: 533  ---EEENEFRHTGGVSHSQCASHFPVVEESDLAFRSHTDLFGNGFENPGALERSLPTL-- 697
               + E +F+H G   HS+ AS+  V E SD+   S+            A+E+S   L  
Sbjct: 205  LNGDTEAQFKHMGVEIHSEYASNSMVTENSDIGLGSYEP----------AIEKSTGDLVT 254

Query: 698  -------NAEIAFIDSETCLVHPHLTEINGSQVSDIHFEGNEIYSEQSSC--GRSTTFSD 850
                   +  I+  D++      + TE +  Q+ D+ +E +E YS    C     + FSD
Sbjct: 255  GGKYSCTSMTISLRDADISSHDVNHTESSICQIPDVVYENSEDYSAVQYCLSADGSLFSD 314

Query: 851  GTVTDSSKKTPHYFSFPFM--------EIKEENM------TC---QEDLVEDQILSS--- 970
                 SS+  P  F   FM         +K+EN       TC   Q +L +D   SS   
Sbjct: 315  ----PSSQYMPDCFDLQFMPSSEEMLINMKDENEELSAENTCLNSQMNLSQDARASSFVQ 370

Query: 971  --------------------QTICTTTNT-----YLEEEAKPQISLSTKASVVDCSNR-- 1069
                                    T+ N+     Y   +    I LST +     + R  
Sbjct: 371  KGLNNYSDVKGLNFNHEGSNYVSPTSGNSSSNAGYGSNDDIRSIQLSTCSQSYMSNKRRA 430

Query: 1070 --------------SISQGSSFKHEASSHCLPTGIGSSRHASKN---LLPGFPSFIPMKK 1198
                           I Q +    EA +     G+ +   A KN   +L  FP FI  KK
Sbjct: 431  ICIKDERKDELVAPGICQPNEVVDEAVNDRFSLGVDARVFADKNSRQMLSCFPPFISSKK 490

Query: 1199 ELVCVDDDRMGEVHASK----------SACFRSATLEGYCSDEAPSHSVPDTQSVFLPGP 1348
             L    D+      ASK              RS +  G   D      +P  +   +   
Sbjct: 491  NLFDAKDENEDLYLASKRPRHCQVIGDELSGRSQSGGGPL-DTVSEQLIPSVKQSTVSNK 549

Query: 1349 NVP-IKEEKKTEVV-PHRYTDYHVKVNGVIKGNHSVD-RSNVDDEADVCILEDISDPRTQ 1519
             +  IK+EK+ +++ P     Y  KV+     ++S+D RS++DD+ D+CILEDIS+P   
Sbjct: 550  QLDYIKDEKEGKLIQPKSMGSYLSKVSPESIQSNSLDHRSHIDDDTDICILEDISEPVRS 609

Query: 1520 PLGRVHEKSPITAQRVVYDPLYHIGIGNTRVKAFDERITLRVALQDLSQPKSESSPPDGT 1699
                +  KS ++ QR   D L++ G+   R +  DER+  RVALQDLSQPKSE+SPPDG 
Sbjct: 610  NSSLLLGKSLVSTQRYS-DSLHNTGVVGMRNRTNDERLIFRVALQDLSQPKSEASPPDGV 668

Query: 1700 LAVSLLRHQRIALSWMVQKETASLHCSGGILADDQGLGKTISTIALILKERPPSSKATSV 1879
            L V LLRH                          QGLGKT+STIALILKERP SS+A   
Sbjct: 669  LTVPLLRH--------------------------QGLGKTVSTIALILKERPTSSRACQE 702

Query: 1880 TVKQNE-------------PKAXXXXXXXXXXXXXXXGMKIKSENASMLAKGRPAAGTLV 2020
             +KQ+E             P+                G  +K ENA +  KGRPAAGTLV
Sbjct: 703  DMKQSELETLNLDEDDDKVPELDGTKQAADSCEVMSHGSSMKKENAFVQGKGRPAAGTLV 762

Query: 2021 VCPTSVLRQWSDELHSKVSKEANLSVLVYHGSNRTKDPFELAKYDVVVTTYSIVSMEVPK 2200
            VCPTSVLRQW++EL SKV+ +ANLSVLVYHGSNRTKDP ELA+YDVV+TTYSIVSMEVPK
Sbjct: 763  VCPTSVLRQWAEELRSKVTSKANLSVLVYHGSNRTKDPCELARYDVVLTTYSIVSMEVPK 822

Query: 2201 QPLVDKDDDEKGQPEGHGLESMEFSYNKKRKYPPSADXXXXXXXXXXXXXXXXXITRPLA 2380
            QPLVDKDD+EK +PE H +   E S NKKRKYPPS+D                 + RPLA
Sbjct: 823  QPLVDKDDEEKVKPEAH-VSPTELSSNKKRKYPPSSDKKCLKDKKAMDGALLESVARPLA 881

Query: 2381 RVGWFRVVLDEAQSIKNHRTQVARACWGLRAKRRWCLSGTPIQNAIDDLYSYFRFLRYDP 2560
            RVGWFRVVLDEAQSIKNHRTQVARACWGLRAKRRWCLSGTPIQNA+DDLYSYFRFLRYDP
Sbjct: 882  RVGWFRVVLDEAQSIKNHRTQVARACWGLRAKRRWCLSGTPIQNAVDDLYSYFRFLRYDP 941

Query: 2561 YAAYKSFCSMIKVPISRNPTNGYKKLQAVLKTIMLRRTKGSLLDGEPIINLPPKSVELKR 2740
            YA YKSFCS IKVPI+RNPTNGY+KLQAVLKTIMLRRTKG+LLDGEPII LPPKSVELK+
Sbjct: 942  YAVYKSFCSTIKVPITRNPTNGYRKLQAVLKTIMLRRTKGTLLDGEPIITLPPKSVELKK 1001

Query: 2741 VDFSMEERGFYSKLEADSRDQFKVYAAAGTVKQNYVNILLMLLRLRQACDHPLLVKGYDS 2920
            VDFS EER FYS+LEADSR QF+VYAAAGTVKQNYVNILLMLLRLRQACDHPLLVKGY+S
Sbjct: 1002 VDFSKEERDFYSRLEADSRAQFEVYAAAGTVKQNYVNILLMLLRLRQACDHPLLVKGYNS 1061

Query: 2921 NSVLRSSVEKAKELAGEKQLELLNCLEARSDICGICNDPPEDAVVTICGHVFCNQCILEH 3100
            NSV RSSVE AK+L+ EKQ+ LLNCLE    ICGICNDPPEDAVV+ICGHVFCNQCI EH
Sbjct: 1062 NSVWRSSVEMAKKLSREKQIYLLNCLEGSLAICGICNDPPEDAVVSICGHVFCNQCICEH 1121

Query: 3101 LTGDENLCPAAQCKVHLNITSVFSRNALRSSL------------FGQTNLENHASQPDET 3244
            LT DEN CP+  CKV LN++SVFS+  L+SSL             G   +E H   P+  
Sbjct: 1122 LTSDENQCPSTNCKVQLNVSSVFSKATLKSSLSDLPVQDISHHCSGSELVEAHDPCPESR 1181

Query: 3245 LVACSKGPSDSSKIKAALEVLQSLSKPWHYTSKDSTISSINEVGPCPVNASDPHIEDRRH 3424
            L        DSSKI+AALEVLQSLSKP   T  +S++ S NE      N SD H E    
Sbjct: 1182 LY-------DSSKIRAALEVLQSLSKPRDCTLGNSSLKSSNETTSGLENLSDSHSEGLLK 1234

Query: 3425 DIETGSN-----DSIVKVSEKAIVFSQWTRMLDLLEVHLKTSSIQYRRLDGTMSVVARDK 3589
            +     N      SI  V EKAIVFSQWTRMLDLLE  LK SSIQYRRLDGTMSVVARDK
Sbjct: 1235 ETCDEKNVVLDKGSITVVGEKAIVFSQWTRMLDLLESCLKNSSIQYRRLDGTMSVVARDK 1294

Query: 3590 AVKDFNAIPEVTVMIMSLKAASLGLNMVAACHVILLDLWWNPTTEDQAIDRAHRIGQT 3763
            AVKDFN +PEV+VMIMSLKAASLGLNMVAACHV+LLDLWWNPTTEDQAIDRAHRIGQT
Sbjct: 1295 AVKDFNTLPEVSVMIMSLKAASLGLNMVAACHVLLLDLWWNPTTEDQAIDRAHRIGQT 1352


>ref|XP_003547135.1| PREDICTED: uncharacterized protein LOC100805307 [Glycine max]
          Length = 1307

 Score =  967 bits (2499), Expect = 0.0
 Identities = 606/1263 (47%), Positives = 759/1263 (60%), Gaps = 52/1263 (4%)
 Frame = +2

Query: 131  EEAPPTECGLLESTQWSHSGNMILSNPMAQTG-SEEMFEFPE-LSGKIFDEGEVDSVSSP 304
            E+A P+E       +W    N +L       G S + F  P  L+G   D   ++S    
Sbjct: 37   EDADPSEVWFCAFNEW----NSVLECEHENQGPSSQTFSSPNALAGGFRDSSMLESDEF- 91

Query: 305  LRTCSVSLTDWSTMSC----------VENDTCSSRERDGVGMNAPLYNFDRTFTPTHVPS 454
               C   +T  S              V     SS    G  +N PL+  +      H+  
Sbjct: 92   ---CFTEMTGVSNCETPAYIADRRFPVPEANSSSVAVCGDNLNLPLWKCENDSQIKHI-G 147

Query: 455  CNATFNFASGDSSGSTDHVNLVDLKNEEENEFRHTGGVSHSQCASHFPVVEESDLAFRSH 634
             +A    AS  S      +N  D +   E+    +G   +  C S      ++D + R  
Sbjct: 148  YDAQSEHASHGSIIENIDLNFGDYETYMEDIIGLSGKQENDSCTSFEMSFVDADRSSRVA 207

Query: 635  TDLFGN---GFENPGALERSLPTLNAEIAFID------SETCL---VHPHLTEINGSQVS 778
            T    +   G   P       P+LN      D      S  CL   V+PH+ + N   V 
Sbjct: 208  TSTDSSICQGSNVPNDFSDYYPSLNCYQGMDDRPVVANSSGCLPNGVYPHVRK-NEEMVR 266

Query: 779  DIHFEGNEIYSEQSSCGRSTTFSDGTVTDSSKKTPHYFSFPFMEIKEENMTCQEDLVEDQ 958
            ++     E++++ SS G  ++ + G     S+       F F + K  +      L ED 
Sbjct: 267  NMKVAKMELFADTSS-GMHSSINGGISFQDSQ-------FRFADSKYASSFPGNVLFED- 317

Query: 959  ILSSQTICTTTNTYLEEEAKPQISLSTKAS----VVDCSNRSISQGSSFKHEASSHCLPT 1126
              ++    +T  +Y+  E +   SL+ KA     ++   N   S  + F        LP 
Sbjct: 318  --NASVELSTCGSYISREGQ---SLTVKAERDELIMPYQNSVHSNDAEFNVGQEMKQLP- 371

Query: 1127 GIGSSRHASKNLLPGFPSFIPMKKELVCVDDDRMGEVHASKSACFRSATLE-GYCSDEAP 1303
            GI  +     N       F   + ++  V   +             +     G  + +  
Sbjct: 372  GIFPAVGCQGN------DFFKCRDKVTIVTSQKAKYYQDGIDGAANNFQANMGNLNLKPL 425

Query: 1304 SHSVPDTQSVFLPGPNVP-IKEEKKTEVVPHRYTDYHVKVNGVIKGNHSVDRSNVDDEAD 1480
              S+ + Q     G     +  E + + + HR  D  +      KG  S++RS ++D++D
Sbjct: 426  DKSLYNAQISIASGKQYNCVMSEGEGKAIEHRSIDSQLS-----KG--SIERSIIEDDSD 478

Query: 1481 VCILEDISDPRTQPLGRVHEKSPITAQRVVYDPLYHIGIGNTRVKAFDERITLRVALQDL 1660
            VCI+EDIS P       V   S IT+Q       +   +G+   KA DE+  LRVALQDL
Sbjct: 479  VCIIEDISHPAPISRSTVLGNSLITSQSSRGGYTHSYMVGSMGPKARDEQYILRVALQDL 538

Query: 1661 SQPKSESSPPDGTLAVSLLRHQRIALSWMVQKETASLHCSGGILADDQGLGKTISTIALI 1840
            SQPKSE SPPDG LAV LLRHQRIALSWMVQKET+SL+CSGGILADDQGLGKT+STI LI
Sbjct: 539  SQPKSEVSPPDGLLAVPLLRHQRIALSWMVQKETSSLYCSGGILADDQGLGKTVSTIGLI 598

Query: 1841 LKERPP---------SSKATSVTVKQNEPKAXXXXXXXXXXXXXXXGMKIKSENASML-- 1987
            LKERPP          S+  ++ +  ++ +                  +  ++N ++L  
Sbjct: 599  LKERPPLLNKCNNAQKSELETLNLDADDDQLPENGIVKNESNMCQVSSRNPNQNMNLLLH 658

Query: 1988 AKGRPAAGTLVVCPTSVLRQWSDELHSKVSKEANLSVLVYHGSNRTKDPFELAKYDVVVT 2167
            AKGRP+AGTL+VCPTSVLRQW++ELH+KV+ +A LSVLVYHGSNRTK+P ELAKYDVV+T
Sbjct: 659  AKGRPSAGTLIVCPTSVLRQWAEELHNKVTCKAKLSVLVYHGSNRTKNPHELAKYDVVLT 718

Query: 2168 TYSIVSMEVPKQPLVDKDDDEKGQPEGHGLESMEFSYNKKRKYPPSADXXXXXXXXXXXX 2347
            TYSIVSMEVPKQPLVDKDD+EKG  + H + S      KKRK PPS+             
Sbjct: 719  TYSIVSMEVPKQPLVDKDDEEKGTYDDHAVSS------KKRKCPPSSKSGKKGLDSAMLE 772

Query: 2348 XXXXXITRPLARVGWFRVVLDEAQSIKNHRTQVARACWGLRAKRRWCLSGTPIQNAIDDL 2527
                 + RPLA+V WFRVVLDEAQSIKNHRTQVARACWGLRAKRRWCLSGTPIQNAIDDL
Sbjct: 773  A----VARPLAKVAWFRVVLDEAQSIKNHRTQVARACWGLRAKRRWCLSGTPIQNAIDDL 828

Query: 2528 YSYFRFLRYDPYAAYKSFCSMIKVPISRNPTNGYKKLQAVLKTIMLRRTKGSLLDGEPII 2707
            YSYFRFLRYDPYA Y SFCS IK+PISR+P+ GY+KLQAVLKTIMLRRTK +LLDGEPII
Sbjct: 829  YSYFRFLRYDPYAVYTSFCSTIKIPISRSPSKGYRKLQAVLKTIMLRRTKATLLDGEPII 888

Query: 2708 NLPPKSVELKRVDFSMEERGFYSKLEADSRDQFKVYAAAGTVKQNYVNILLMLLRLRQAC 2887
            +LPPKSVELK+V+FS EER FYS+LEADSR QF+ YA AGTVKQNYVNILLMLLRLRQAC
Sbjct: 889  SLPPKSVELKKVEFSPEERDFYSRLEADSRAQFQEYADAGTVKQNYVNILLMLLRLRQAC 948

Query: 2888 DHPLLVKGYDSNSVLRSSVEKAKELAGEKQLELLNCLEARSDICGICNDPPEDAVVTICG 3067
            DHPLLVK Y+SNS+ +SSVE AK+L  EK+L LL CLEA   +CGICNDPPEDAVV++CG
Sbjct: 949  DHPLLVKRYNSNSLWKSSVEMAKKLPQEKRLCLLKCLEASLALCGICNDPPEDAVVSVCG 1008

Query: 3068 HVFCNQCILEHLTGDENLCPAAQCKVHLNITSVFSRNALRSSLFGQ--TNLENHASQPDE 3241
            HVFCNQCI E+LTGD+N CPA  CK  L+  SVFS+  L SS   Q   NL +++    E
Sbjct: 1009 HVFCNQCICEYLTGDDNQCPAPNCKTRLSTPSVFSKVTLNSSFSDQPCDNLPDYSGCEVE 1068

Query: 3242 TLVACSKG-PSDSSKIKAALEVLQSLSKPWHYTSKDSTISSINEVGPCPVNASDP----- 3403
                CS+  P DSSKIKAALEVLQSLSKP  + S+++++ S +      + +S       
Sbjct: 1069 ESEFCSQAQPYDSSKIKAALEVLQSLSKPQCFASQNNSVQSTSGESTDGLGSSSSADRMK 1128

Query: 3404 ---HIEDRRHDIETGSNDSIVKVSEKAIVFSQWTRMLDLLEVHLKTSSIQYRRLDGTMSV 3574
                I + ++ +E  S+++ V V EKAIVFSQWTRMLD+LE  LK SSIQYRRLDGTMSV
Sbjct: 1129 SLNEIPESQNVLEERSSNNSVGVGEKAIVFSQWTRMLDILEACLKNSSIQYRRLDGTMSV 1188

Query: 3575 VARDKAVKDFNAIPEVTVMIMSLKAASLGLNMVAACHVILLDLWWNPTTEDQAIDRAHRI 3754
             ARDKAVKDFN +PEV+VMIMSLKAASLGLNMVAACHV++LDLWWNPTTEDQAIDRAHRI
Sbjct: 1189 TARDKAVKDFNTLPEVSVMIMSLKAASLGLNMVAACHVLMLDLWWNPTTEDQAIDRAHRI 1248

Query: 3755 GQT 3763
            GQT
Sbjct: 1249 GQT 1251


>ref|XP_003593498.1| Helicase-like transcription factor [Medicago truncatula]
            gi|355482546|gb|AES63749.1| Helicase-like transcription
            factor [Medicago truncatula]
          Length = 1314

 Score =  943 bits (2437), Expect = 0.0
 Identities = 515/810 (63%), Positives = 593/810 (73%), Gaps = 37/810 (4%)
 Frame = +2

Query: 1445 SVDRSNVDDEADVCILEDISDPRTQPLGRVHEKSPIT-AQRVVYDPLYHIGIGNTRVKAF 1621
            S + SN +D+ DVCI+EDIS P   P  R  E + +  +Q   +D       G TR KA 
Sbjct: 466  STEGSNDEDDCDVCIIEDISHPA--PTSRSAEFNSLNMSQSSRFDYTQPYMAGGTRPKAH 523

Query: 1622 DERITLRVALQDLSQPKSESSPPDGTLAVSLLRHQ-----------RIALSWMVQKETAS 1768
            DE+  LR ALQD+SQPKSE +PPDG LAV LLRHQ           +IALSWMVQKET+S
Sbjct: 524  DEQYILRAALQDISQPKSEVTPPDGLLAVPLLRHQECGSDGLDLEFKIALSWMVQKETSS 583

Query: 1769 LHCSGGILADDQGLGKTISTIALILKERPPSSKATSVTVKQNEPKAXXXXXXXXXXXXXX 1948
            L+CSGGILADDQGLGKT+STIALILKERPP  K  +     N  K+              
Sbjct: 584  LYCSGGILADDQGLGKTVSTIALILKERPPLLKTCN-----NAQKSVLQTMDLDDDPLPE 638

Query: 1949 XGMKIK---------------SENASMLAKGRPAAGTLVVCPTSVLRQWSDELHSKVSKE 2083
             G+  K               S N S+ AKGRP+AGTLVVCPTSVLRQW+DELH+KV+ +
Sbjct: 639  NGLVKKESTVCQDASDRNATTSANLSVHAKGRPSAGTLVVCPTSVLRQWADELHNKVTCK 698

Query: 2084 ANLSVLVYHGSNRTKDPFELAKYDVVVTTYSIVSMEVPKQPLVDKDDD---EKGQPEGHG 2254
            ANLSVLVYHGS+RTKDP+ELAKYDVV+TTYSIVSMEVPKQPLVDKDD    EKG  E H 
Sbjct: 699  ANLSVLVYHGSSRTKDPYELAKYDVVLTTYSIVSMEVPKQPLVDKDDKDDKEKGIYEDHP 758

Query: 2255 LESMEFSYNKKRKYPPSADXXXXXXXXXXXXXXXXXITRPLARVGWFRVVLDEAQSIKNH 2434
            +       N+KRK PPS+                    RPLA+V WFRVVLDEAQSIKNH
Sbjct: 759  VP------NRKRKCPPSSKSGKKALNSMMLEAA----ARPLAKVAWFRVVLDEAQSIKNH 808

Query: 2435 RTQVARACWGLRAKRRWCLSGTPIQNAIDDLYSYFRFLRYDPYAAYKSFCSMIKVPISRN 2614
            RTQVARACWGLRAKRRWCLSGTPIQNAIDDLYSYFRFLRYDPYA Y SFCS IK+PI+RN
Sbjct: 809  RTQVARACWGLRAKRRWCLSGTPIQNAIDDLYSYFRFLRYDPYAVYTSFCSTIKIPINRN 868

Query: 2615 PTNGYKKLQAVLKTIMLRRTKGSLLDGEPIINLPPKSVELKRVDFSMEERGFYSKLEADS 2794
            P+ GY+KLQAVLKTIMLRRTKG+LLDGEPII+LPPKSVEL++V+FS EER FYSKLEADS
Sbjct: 869  PSKGYRKLQAVLKTIMLRRTKGTLLDGEPIISLPPKSVELRKVEFSQEERDFYSKLEADS 928

Query: 2795 RDQFKVYAAAGTVKQNYVNILLMLLRLRQACDHPLLVKGYDSNSVLRSSVEKAKELAGEK 2974
            R QF+ YA AGTVKQNYVNILLMLLRLRQACDHPLLVK Y+S ++ +SSVE A +L  EK
Sbjct: 929  RAQFQEYADAGTVKQNYVNILLMLLRLRQACDHPLLVKRYNSTTLWKSSVETAMKLPREK 988

Query: 2975 QLELLNCLEARSDICGICNDPPEDAVVTICGHVFCNQCILEHLTGDENLCPAAQCKVHLN 3154
            QL LL CLEA   +CGICND PE+AVV++CGHVFCNQCI EHLTG++N CPA  CK  LN
Sbjct: 989  QLFLLKCLEASLALCGICNDAPEEAVVSVCGHVFCNQCICEHLTGEDNQCPATNCKTRLN 1048

Query: 3155 ITSVFSRNALRSSLFGQTNLENHASQPDETLVACSKGPSDSSKIKAALEVLQSLSKPWHY 3334
            +++VF +  L SS+          S+ +++       P DSSKI+AALEVLQSLSKP  +
Sbjct: 1049 MSAVFPKATLNSSISDPACDHLPGSEVEDSEPCSRTQPCDSSKIRAALEVLQSLSKPQCH 1108

Query: 3335 TSKDSTISSIN-EVGPCPVNASD------PHIEDRRHDIETGSNDSIVKVSEKAIVFSQW 3493
            TS+ S + S + E   C   +++         E +   +E  SNDS+  + EKAIVFSQW
Sbjct: 1109 TSQRSHVQSTSRESSDCSSTSANNGKSISDVPEKKAMFMEKSSNDSVGSLGEKAIVFSQW 1168

Query: 3494 TRMLDLLEVHLKTSSIQYRRLDGTMSVVARDKAVKDFNAIPEVTVMIMSLKAASLGLNMV 3673
            T MLDLLE  LK SSIQYRRLDGTMSV+ARDKAVKDFN +PEV+VMIMSLKAASLGLNMV
Sbjct: 1169 TGMLDLLEACLKDSSIQYRRLDGTMSVLARDKAVKDFNTLPEVSVMIMSLKAASLGLNMV 1228

Query: 3674 AACHVILLDLWWNPTTEDQAIDRAHRIGQT 3763
            AACHV++LDLWWNPTTEDQAIDRAHRIGQT
Sbjct: 1229 AACHVLMLDLWWNPTTEDQAIDRAHRIGQT 1258


>ref|XP_002317230.1| chromatin remodeling complex subunit [Populus trichocarpa]
            gi|222860295|gb|EEE97842.1| chromatin remodeling complex
            subunit [Populus trichocarpa]
          Length = 800

 Score =  941 bits (2433), Expect = 0.0
 Identities = 499/756 (66%), Positives = 563/756 (74%), Gaps = 26/756 (3%)
 Frame = +2

Query: 1574 DPLYHIGIGNTRVKAFDERITLRVALQDLSQPKSESSPPDGTLAVSLLRHQRIALSWMVQ 1753
            D  +H  +  TR +A DER+ LRVALQDL+QP SE+ PPDG LAV L+RHQRIALSWMVQ
Sbjct: 2    DSPHHSAVEGTRFRANDERLVLRVALQDLAQPNSEAVPPDGVLAVPLMRHQRIALSWMVQ 61

Query: 1754 KETASLHCSGGILADDQGLGKTISTIALILKERPPSSKATSVTVKQNEPKAXXXXXXXXX 1933
            KET+SLHCSGGILADDQGLGKT+STIALILKER PS +A +V VK+ E +          
Sbjct: 62   KETSSLHCSGGILADDQGLGKTVSTIALILKERAPSHRADAVAVKKEECETLNLDDDDDG 121

Query: 1934 XXXXXXGMK-------------IKSENASMLAKGRPAAGTLVVCPTSVLRQWSDELHSKV 2074
                    K              KS N+S  +KGRPAAGTL+VCPTSVLRQW DEL  KV
Sbjct: 122  VTEIDRMKKGADGSQVTSNHSSTKSLNSSGQSKGRPAAGTLIVCPTSVLRQWDDELRKKV 181

Query: 2075 SKEANLSVLVYHGSNRTKDPFELAKYDVVVTTYSIVSMEVPKQPLVDKDDDEKGQPEGHG 2254
            + EANLSVLVYHGSNRTKDP ELAKYDVV+TTYSIVSMEVP+QPL D+DD+EK + EG  
Sbjct: 182  TTEANLSVLVYHGSNRTKDPSELAKYDVVITTYSIVSMEVPRQPLADEDDEEKRRMEGDD 241

Query: 2255 LESMEFSYNKKRKYPPSADXXXXXXXXXXXXXXXXXITRPLARVGWFRVVLDEAQSIKNH 2434
               + FSY+KKRK PPS                   I RPLA+V WFRVVLDEAQSIKNH
Sbjct: 242  APRLGFSYSKKRKNPPSFGKKGSKNKKGMDSAMLESIARPLAKVAWFRVVLDEAQSIKNH 301

Query: 2435 RTQVARACWGLRAKRRWCLSGTPIQNAIDDLYSYFRFLRYDPYAAYKSFCSMIKVPISRN 2614
            RT VARACWGLRAKRRWCLSGTPIQNAIDDLYSYFRFLRYDPYA YK FCS IKVPI +N
Sbjct: 302  RTHVARACWGLRAKRRWCLSGTPIQNAIDDLYSYFRFLRYDPYAGYKLFCSAIKVPIQKN 361

Query: 2615 PTNGYKKLQAVLKTIMLRRTKGSLLDGEPIINLPPKSVELKRVDFSMEERGFYSKLEADS 2794
               GYKKLQAVLKT+MLRRTKG+LLDGEPIINLPP+ VELK+VDF+ EER FY++LE DS
Sbjct: 362  EQKGYKKLQAVLKTVMLRRTKGTLLDGEPIINLPPRVVELKKVDFTEEEREFYTRLEIDS 421

Query: 2795 RDQFKVYAAAGTVKQNYVNILLMLLRLRQACDHPLLVKGYDSNSVLRSSVEKAKELAGEK 2974
            R QFK YAAAGTVKQNYVNILLMLLRLRQACDHP LV G DS+S+  SSVE AK+L  EK
Sbjct: 422  RAQFKEYAAAGTVKQNYVNILLMLLRLRQACDHPRLVSGLDSSSLGSSSVEMAKKLPREK 481

Query: 2975 QLELLNCLEARSDICGICNDPPEDAVVTICGHVFCNQCILEHLTGDENLCPAAQCKVHLN 3154
            QL LLNCLEA    CGIC+DPPEDAVV++CGHVFC QC+ EHLTGD++ CP + CKV LN
Sbjct: 482  QLCLLNCLEASLASCGICSDPPEDAVVSVCGHVFCRQCVFEHLTGDDSQCPMSNCKVRLN 541

Query: 3155 ITSVFSRNALRSSLFGQTNLENHASQPDETLVACSKG-PSDSSKIKAALEVLQSLSKPWH 3331
            ++SVFS+  L SSL  +   +   S+    + + S   P DSSKI+ ALE+LQSL+KP  
Sbjct: 542  VSSVFSKATLNSSLSDEPGQDCSDSELVAAVSSSSDNRPHDSSKIRVALEILQSLTKPKD 601

Query: 3332 YTSKDSTI-SSINEVGPCPVNASDPHIEDRRHDIETGSNDS-----------IVKVSEKA 3475
                 + + +S++E   C             +D  +GS DS           I  V EKA
Sbjct: 602  CLPTGNLLENSVDENVAC-------------YDTSSGSRDSVKDGMDKRCLPIKAVGEKA 648

Query: 3476 IVFSQWTRMLDLLEVHLKTSSIQYRRLDGTMSVVARDKAVKDFNAIPEVTVMIMSLKAAS 3655
            IVFSQWT MLDLLE  LK SSIQYRRLDGTMSV ARDKAVKDFN +PEV+VMIMSLKAAS
Sbjct: 649  IVFSQWTGMLDLLEACLKNSSIQYRRLDGTMSVTARDKAVKDFNTLPEVSVMIMSLKAAS 708

Query: 3656 LGLNMVAACHVILLDLWWNPTTEDQAIDRAHRIGQT 3763
            LGLNMVAACHV+LLDLWWNPTTEDQAIDRAHRIGQT
Sbjct: 709  LGLNMVAACHVLLLDLWWNPTTEDQAIDRAHRIGQT 744