BLASTX nr result
ID: Coptis25_contig00014136
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00014136
(1016 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABR16195.1| unknown [Picea sitchensis] 107 2e-28
ref|XP_002519100.1| multidrug resistance pump, putative [Ricinus... 105 3e-27
dbj|BAJ91927.1| predicted protein [Hordeum vulgare subsp. vulgare] 92 3e-26
ref|XP_003569893.1| PREDICTED: protein TRANSPARENT TESTA 12-like... 94 1e-25
gb|AAL24258.1| At1g47530/F16N3_20 [Arabidopsis thaliana] gi|2776... 104 3e-25
>gb|ABR16195.1| unknown [Picea sitchensis]
Length = 500
Score = 90.5 bits (223), Expect(3) = 2e-28
Identities = 41/56 (73%), Positives = 47/56 (83%)
Frame = +1
Query: 568 LSGVAIGAGWQNLVAYINVACYYLLGFPIGALLGYKFNLGLPGLWGGIISGVGLQT 735
LSGVAIGAGWQ LVAYIN+ACYYL G P+G LLGY F+LG+ G+W G+ISG LQT
Sbjct: 415 LSGVAIGAGWQALVAYINLACYYLFGVPLGCLLGYYFDLGVEGIWAGMISGTLLQT 470
Score = 46.2 bits (108), Expect(3) = 2e-28
Identities = 22/44 (50%), Positives = 33/44 (75%)
Frame = +2
Query: 365 TRKDFPAVFTENKLVMAEVSRVALFLCTSVFLCSIQPVLSGVAI 496
TR +F FT++K+VM+ V+++A L ++ L S+QPVLSGVAI
Sbjct: 377 TRNEFAVAFTDSKVVMSAVAQLAPLLAFTMLLNSVQPVLSGVAI 420
Score = 36.2 bits (82), Expect(3) = 2e-28
Identities = 16/27 (59%), Positives = 18/27 (66%)
Frame = +3
Query: 849 IILVIVTLRTDWEKEAKLAAERISTWG 929
IIL I+T RT W KEA A RI+ WG
Sbjct: 471 IILCIITYRTKWNKEANQAKARITLWG 497
Score = 107 bits (266), Expect = 6e-21
Identities = 52/73 (71%), Positives = 59/73 (80%)
Frame = +1
Query: 1 MLCLEYWYVMVLILLAGLLKNPEITVDAASICMNLEGWIYMIPLGFMAAVSVRVSNELGA 180
MLCLE WY+ +LILLAG LKNP I VDA SICMNL GW +MI +GF A+SVRVSNELGA
Sbjct: 287 MLCLEAWYLYLLILLAGYLKNPTIAVDAISICMNLMGWEFMIAIGFNIAISVRVSNELGA 346
Query: 181 GNPRAVRFSVWVM 219
G PRA +FSV V+
Sbjct: 347 GRPRAAKFSVIVV 359
>ref|XP_002519100.1| multidrug resistance pump, putative [Ricinus communis]
gi|223541763|gb|EEF43311.1| multidrug resistance pump,
putative [Ricinus communis]
Length = 496
Score = 82.8 bits (203), Expect(3) = 3e-27
Identities = 35/55 (63%), Positives = 45/55 (81%)
Frame = +1
Query: 568 LSGVAIGAGWQNLVAYINVACYYLLGFPIGALLGYKFNLGLPGLWGGIISGVGLQ 732
L GVA+GAGWQ VA IN+ACYY++G PIGA+LGYKF LG+ G+W G+++G LQ
Sbjct: 398 LHGVAVGAGWQLSVALINIACYYIVGLPIGAVLGYKFKLGVKGIWSGMLAGCVLQ 452
Score = 49.3 bits (116), Expect(3) = 3e-27
Identities = 23/44 (52%), Positives = 30/44 (68%)
Frame = +2
Query: 365 TRKDFPAVFTENKLVMAEVSRVALFLCTSVFLCSIQPVLSGVAI 496
T+ +FP VFT VM E S++ FL ++FL SIQPVL GVA+
Sbjct: 360 TKNEFPKVFTGKPAVMQEASKLGYFLAATIFLNSIQPVLHGVAV 403
Score = 37.0 bits (84), Expect(3) = 3e-27
Identities = 14/27 (51%), Positives = 20/27 (74%)
Frame = +3
Query: 849 IILVIVTLRTDWEKEAKLAAERISTWG 929
+IL+ + LRT+W KEA + ER+ TWG
Sbjct: 454 VILIFIMLRTNWNKEAVQSEERMRTWG 480
Score = 105 bits (263), Expect = 1e-20
Identities = 51/72 (70%), Positives = 57/72 (79%)
Frame = +1
Query: 1 MLCLEYWYVMVLILLAGLLKNPEITVDAASICMNLEGWIYMIPLGFMAAVSVRVSNELGA 180
MLCLE WY +IL+ G LKNPEI VDA SICMNL+ W MI LGF AA+SVRVSNELGA
Sbjct: 270 MLCLELWYFTAVILMVGWLKNPEIAVDAISICMNLQLWTLMIALGFNAAISVRVSNELGA 329
Query: 181 GNPRAVRFSVWV 216
GNP+A +FSV V
Sbjct: 330 GNPKAAKFSVMV 341
>dbj|BAJ91927.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 479
Score = 92.0 bits (227), Expect(3) = 3e-26
Identities = 39/56 (69%), Positives = 46/56 (82%)
Frame = +1
Query: 568 LSGVAIGAGWQNLVAYINVACYYLLGFPIGALLGYKFNLGLPGLWGGIISGVGLQT 735
LSGVAIG GWQ LVAYIN+ CYY+ G P+G LLGYKFN G+ G+W G++ GVGLQT
Sbjct: 385 LSGVAIGGGWQGLVAYINLGCYYIFGLPLGYLLGYKFNYGVGGIWAGMLCGVGLQT 440
Score = 37.4 bits (85), Expect(3) = 3e-26
Identities = 19/43 (44%), Positives = 29/43 (67%)
Frame = +2
Query: 368 RKDFPAVFTENKLVMAEVSRVALFLCTSVFLCSIQPVLSGVAI 496
R +F +++T N + VS++A L ++ L S+QPVLSGVAI
Sbjct: 348 RDNFASIYTSNVELRQAVSKIAGLLGLTMVLNSVQPVLSGVAI 390
Score = 36.2 bits (82), Expect(3) = 3e-26
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = +3
Query: 849 IILVIVTLRTDWEKEAKLAAERISTWG 929
+IL+++ RTDW EA LA+ R+ WG
Sbjct: 441 LILLVIVWRTDWNTEAALASSRVQKWG 467
Score = 80.9 bits (198), Expect = 5e-13
Identities = 37/73 (50%), Positives = 53/73 (72%)
Frame = +1
Query: 1 MLCLEYWYVMVLILLAGLLKNPEITVDAASICMNLEGWIYMIPLGFMAAVSVRVSNELGA 180
MLCLE WY+ ++ +L G L++ +I VD+ +CMN+ GW M+ +G AA+SVRVSNELG+
Sbjct: 257 MLCLEIWYLGMITVLTGDLQDAQIAVDSLGVCMNINGWEGMVFIGLNAAISVRVSNELGS 316
Query: 181 GNPRAVRFSVWVM 219
G PRA +V V+
Sbjct: 317 GRPRAALHAVVVV 329
>ref|XP_003569893.1| PREDICTED: protein TRANSPARENT TESTA 12-like [Brachypodium
distachyon]
Length = 475
Score = 78.6 bits (192), Expect(3) = 1e-25
Identities = 32/56 (57%), Positives = 43/56 (76%)
Frame = +1
Query: 568 LSGVAIGAGWQNLVAYINVACYYLLGFPIGALLGYKFNLGLPGLWGGIISGVGLQT 735
LSGVAIGAGWQ+LVA++N+ CYYL+G P+ A+ G+K L G+W G++ G LQT
Sbjct: 381 LSGVAIGAGWQSLVAFVNIGCYYLVGLPLAAVFGFKLKLNATGIWAGMLIGTILQT 436
Score = 46.6 bits (109), Expect(3) = 1e-25
Identities = 22/43 (51%), Positives = 31/43 (72%)
Frame = +2
Query: 368 RKDFPAVFTENKLVMAEVSRVALFLCTSVFLCSIQPVLSGVAI 496
RK P +FT++ L++ E +++ L +VFL SIQPVLSGVAI
Sbjct: 344 RKQLPRLFTDDDLLVKETAKLGYLLAAAVFLNSIQPVLSGVAI 386
Score = 38.5 bits (88), Expect(3) = 1e-25
Identities = 15/27 (55%), Positives = 19/27 (70%)
Frame = +3
Query: 849 IILVIVTLRTDWEKEAKLAAERISTWG 929
IIL ++ RT W+KEA LA ER+ WG
Sbjct: 437 IILFVILFRTKWQKEAMLAEERVQAWG 463
Score = 94.0 bits (232), Expect = 5e-17
Identities = 47/75 (62%), Positives = 54/75 (72%)
Frame = +1
Query: 1 MLCLEYWYVMVLILLAGLLKNPEITVDAASICMNLEGWIYMIPLGFMAAVSVRVSNELGA 180
MLCLE WY +I+L G LKNPEI V A SI MN W M+ LGF AAVSVRV+NELGA
Sbjct: 253 MLCLETWYYTAVIILVGCLKNPEIQVGAVSISMNYHIWALMVTLGFNAAVSVRVANELGA 312
Query: 181 GNPRAVRFSVWVMTT 225
+P+A +FSV V TT
Sbjct: 313 NHPKAAKFSVVVATT 327
>gb|AAL24258.1| At1g47530/F16N3_20 [Arabidopsis thaliana]
gi|27764936|gb|AAO23589.1| At1g47530/F16N3_20
[Arabidopsis thaliana]
Length = 484
Score = 87.0 bits (214), Expect(3) = 3e-25
Identities = 34/56 (60%), Positives = 48/56 (85%)
Frame = +1
Query: 568 LSGVAIGAGWQNLVAYINVACYYLLGFPIGALLGYKFNLGLPGLWGGIISGVGLQT 735
LSGVA+GAGWQ LVAY+N+ACYY++G P G +LG+ +LG+ G+WGG+++G+ LQT
Sbjct: 397 LSGVAVGAGWQALVAYVNIACYYIIGLPAGLVLGFTLDLGVQGIWGGMVAGICLQT 452
Score = 46.2 bits (108), Expect(3) = 3e-25
Identities = 22/44 (50%), Positives = 32/44 (72%)
Frame = +2
Query: 365 TRKDFPAVFTENKLVMAEVSRVALFLCTSVFLCSIQPVLSGVAI 496
T+ FP +FT ++ V AE +R+A+ L +V L S+QPVLSGVA+
Sbjct: 359 TKDSFPYLFTSSEAVAAETTRIAVLLGFTVLLNSLQPVLSGVAV 402
Score = 29.3 bits (64), Expect(3) = 3e-25
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +3
Query: 849 IILVIVTLRTDWEKEAKLAAERISTWG 929
+IL+ + T+W KEA+ A R+ WG
Sbjct: 453 LILIGIIYFTNWNKEAEQAESRVQRWG 479
Score = 104 bits (260), Expect = 3e-20
Identities = 49/74 (66%), Positives = 60/74 (81%)
Frame = +1
Query: 1 MLCLEYWYVMVLILLAGLLKNPEITVDAASICMNLEGWIYMIPLGFMAAVSVRVSNELGA 180
MLCLE+WY+MVL+++ GLL NP I VDA SICMN+EGW MI +GF AA+SVRVSNELGA
Sbjct: 269 MLCLEFWYLMVLVVVTGLLPNPLIPVDAISICMNIEGWTAMISIGFNAAISVRVSNELGA 328
Query: 181 GNPRAVRFSVWVMT 222
GN +FSV V++
Sbjct: 329 GNAALAKFSVIVVS 342