BLASTX nr result

ID: Coptis25_contig00014128 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00014128
         (1566 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282660.2| PREDICTED: uncharacterized protein LOC100267...   204   7e-50
emb|CBI16355.3| unnamed protein product [Vitis vinifera]              204   7e-50
ref|XP_002513492.1| conserved hypothetical protein [Ricinus comm...   179   2e-42
ref|XP_002313344.1| predicted protein [Populus trichocarpa] gi|2...   174   8e-41
ref|XP_002299902.1| predicted protein [Populus trichocarpa] gi|2...   172   2e-40

>ref|XP_002282660.2| PREDICTED: uncharacterized protein LOC100267248 [Vitis vinifera]
          Length = 507

 Score =  204 bits (518), Expect = 7e-50
 Identities = 137/316 (43%), Positives = 182/316 (57%), Gaps = 6/316 (1%)
 Frame = +1

Query: 166  MSTI-RRARWH-AXXXXXXKILNIPRRHHRKTTTKQLPRNNTPLSD--IQRSTCRGKLES 333
            MST  RR +WH +      +ILN+P RH R+           P +D  ++RS  R KLE+
Sbjct: 1    MSTATRRLKWHPSPPTPSPRILNLPHRHRRRPP-------KPPAADFLLRRSCRRAKLET 53

Query: 334  LFDQERVFSRTSVPIVLLNSFNDSXXXXXXXXXXXXXXXXXXXXXXXXXWRFQAEILRAE 513
            LF QER FS+T VPIV+ +S                             WR +AEILRAE
Sbjct: 54   LFHQERAFSKT-VPIVVFDS--GCERRERVEEGEEEEEVVAVAEAEEERWRVEAEILRAE 110

Query: 514  CNFFRMERDIALKKLELNCVQTKRTLRSAVETLVSGKEKIHEGKKMSSVXXXXXXXXXXX 693
            CNF RMER++A+KKLE + V  +  LRSAV+T++SGK+KI EGK +S+V           
Sbjct: 111  CNFLRMEREVAVKKLEKSRVHMESALRSAVQTIISGKKKICEGKSVSTVLEEEIEDLAEK 170

Query: 694  XXXXQRSSGVRDFEFGKSSNFDKQANILQRKLEKLGSEGLLQNEDEKCV*EIRDMAESSL 873
                QRSS  +DFE  K SNFDKQ ++LQR+LEKLG         +KCV EI+++AE+SL
Sbjct: 171  LEKLQRSSDAKDFEVKKCSNFDKQTSLLQRRLEKLG------GISDKCVKEIQEIAEASL 224

Query: 874  TIITSWNIDQCSEDDQE-NRFKDVEVLRRKMVKL*KG-MLERMEEECGSMIFXXXXXXXX 1047
            +I TS ++ + S  ++  N+F DVE+LRRKM  L +G +LERM+EE GSM+         
Sbjct: 225  SINTSCSVGKSSVSNRRCNKFMDVEILRRKMEGLSRGVLLERMKEEYGSMLSTENCSIAS 284

Query: 1048 XXXXXRRIEFPHLSSS 1095
                 RRIE P  SSS
Sbjct: 285  SASTSRRIEAPDSSSS 300


>emb|CBI16355.3| unnamed protein product [Vitis vinifera]
          Length = 654

 Score =  204 bits (518), Expect = 7e-50
 Identities = 137/316 (43%), Positives = 182/316 (57%), Gaps = 6/316 (1%)
 Frame = +1

Query: 166  MSTI-RRARWH-AXXXXXXKILNIPRRHHRKTTTKQLPRNNTPLSD--IQRSTCRGKLES 333
            MST  RR +WH +      +ILN+P RH R+           P +D  ++RS  R KLE+
Sbjct: 16   MSTATRRLKWHPSPPTPSPRILNLPHRHRRRPP-------KPPAADFLLRRSCRRAKLET 68

Query: 334  LFDQERVFSRTSVPIVLLNSFNDSXXXXXXXXXXXXXXXXXXXXXXXXXWRFQAEILRAE 513
            LF QER FS+T VPIV+ +S                             WR +AEILRAE
Sbjct: 69   LFHQERAFSKT-VPIVVFDS--GCERRERVEEGEEEEEVVAVAEAEEERWRVEAEILRAE 125

Query: 514  CNFFRMERDIALKKLELNCVQTKRTLRSAVETLVSGKEKIHEGKKMSSVXXXXXXXXXXX 693
            CNF RMER++A+KKLE + V  +  LRSAV+T++SGK+KI EGK +S+V           
Sbjct: 126  CNFLRMEREVAVKKLEKSRVHMESALRSAVQTIISGKKKICEGKSVSTVLEEEIEDLAEK 185

Query: 694  XXXXQRSSGVRDFEFGKSSNFDKQANILQRKLEKLGSEGLLQNEDEKCV*EIRDMAESSL 873
                QRSS  +DFE  K SNFDKQ ++LQR+LEKLG         +KCV EI+++AE+SL
Sbjct: 186  LEKLQRSSDAKDFEVKKCSNFDKQTSLLQRRLEKLG------GISDKCVKEIQEIAEASL 239

Query: 874  TIITSWNIDQCSEDDQE-NRFKDVEVLRRKMVKL*KG-MLERMEEECGSMIFXXXXXXXX 1047
            +I TS ++ + S  ++  N+F DVE+LRRKM  L +G +LERM+EE GSM+         
Sbjct: 240  SINTSCSVGKSSVSNRRCNKFMDVEILRRKMEGLSRGVLLERMKEEYGSMLSTENCSIAS 299

Query: 1048 XXXXXRRIEFPHLSSS 1095
                 RRIE P  SSS
Sbjct: 300  SASTSRRIEAPDSSSS 315


>ref|XP_002513492.1| conserved hypothetical protein [Ricinus communis]
            gi|223547400|gb|EEF48895.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 527

 Score =  179 bits (453), Expect = 2e-42
 Identities = 127/314 (40%), Positives = 173/314 (55%), Gaps = 5/314 (1%)
 Frame = +1

Query: 172  TIRRARW-HAXXXXXXKILNIPRRHHRKTTTKQLPRNNTPLSDIQRSTCRGKLESLFDQE 348
            T RR +W +       +IL++PRR  RK   K     N      QR   +GKLE+LFDQE
Sbjct: 11   TARRPKWQYPPAAPTPRILHLPRRPRRKPQIKA----NAVKPSSQRDK-KGKLETLFDQE 65

Query: 349  RVFSRTSVPIVLLNSFNDSXXXXXXXXXXXXXXXXXXXXXXXXXWRFQAEILRAECNFFR 528
            R F+R  +PIV++                               WRFQAE+LRAECN  R
Sbjct: 66   REFARGVLPIVMVTD-------QCQEGRRERVAERESVVMEEEKWRFQAEMLRAECNLLR 118

Query: 529  MERDIALKKLELNCVQTKRTLRSAVETLVSGKEKIHEGKKMSSVXXXXXXXXXXXXXXXQ 708
            MER+IA+KK+E    Q ++ L+SAV+TL+SG++KI +GK++S V               Q
Sbjct: 119  MEREIAVKKMERRRAQVEKALKSAVQTLLSGRKKISDGKEVSMVLEEEIIKLVEKLEKLQ 178

Query: 709  RSSGVR--DFEFGKSSNFDKQANILQRKLEKLGSEGLLQNEDEKCV*EIRDMAESSLTI- 879
            RSS  R  D E  K SNFD+QA+ LQR+LEK   E      DE CV EI++MAE+SL+I 
Sbjct: 179  RSSRSRNKDLEVRKCSNFDRQASHLQRRLEKFTGE-----PDEICVKEIQEMAEASLSIQ 233

Query: 880  ITSWNIDQCSEDDQENRFKDVEVLRRKMVKL*KG-MLERMEEECGSMIFXXXXXXXXXXX 1056
            ITS    + +E+   N   ++E+LRR+M +L KG +LERME E GSM+            
Sbjct: 234  ITS----RANENFASNCSSNMEILRRRMERLSKGNLLERMEVEYGSMVSTSNSSASSSAA 289

Query: 1057 XXRRIEFPHLSSSA 1098
              ++ EFP +SSS+
Sbjct: 290  TSKQNEFPEISSSS 303


>ref|XP_002313344.1| predicted protein [Populus trichocarpa] gi|222849752|gb|EEE87299.1|
            predicted protein [Populus trichocarpa]
          Length = 504

 Score =  174 bits (440), Expect = 8e-41
 Identities = 123/312 (39%), Positives = 164/312 (52%), Gaps = 3/312 (0%)
 Frame = +1

Query: 172  TIRRARW-HAXXXXXXKILNIPRRHHRKTTTKQLPRNNTPLSDIQRSTCRGKLESLFDQE 348
            T RR +W +       +IL++PRR  RK    Q+P+ N      QR   +GKLE+LFDQE
Sbjct: 11   TTRRPKWQYPPAQPTPRILHLPRRPRRKP---QVPKANATKPSSQRDE-KGKLEALFDQE 66

Query: 349  RVFSRTSVPIVLLNSFNDSXXXXXXXXXXXXXXXXXXXXXXXXXWRFQAEILRAECNFFR 528
            R F+R  VPI++ +                              WRFQAE+LRAECN  R
Sbjct: 67   RGFARGVVPIMMASG--SRGYQCFEEERRERVEERESVVMEEEKWRFQAEMLRAECNLLR 124

Query: 529  MERDIALKKLELNCVQTKRTLRSAVETLVSGKEKIHEGKKMSSVXXXXXXXXXXXXXXXQ 708
            MER+IA+KK+E   VQ +R LRSAVETL+SG++ I +GK  S V               Q
Sbjct: 125  MEREIAVKKMERRRVQMERILRSAVETLLSGRKGICDGKDASMVLDEEIQELVEKLEKLQ 184

Query: 709  RSSGVRDFEFGKSSNFDKQANILQRKLEKLGSEGLLQNEDEKCV*EIRDMAESSLTIITS 888
            R SGV+D E  K SN D+Q ++LQR L+  G E      DEKCV EI+++AE+S+     
Sbjct: 185  RRSGVKDLEGRKCSNLDRQVSLLQRGLKNFGGE-----SDEKCVKEIQEVAEASI----- 234

Query: 889  WNIDQCSEDDQENRFKDVEVLRRKMVKL-*KGMLERMEEECGSMIFXXXXXXXXXXXXXR 1065
                      +EN  + +E+LRRKM  L  + +LERME+E GSM               +
Sbjct: 235  ----------EENNVQQMEILRRKMEGLSNRSLLERMEDEYGSMHSTASSSAANYASSSK 284

Query: 1066 R-IEFPHLSSSA 1098
            R IEFP   SS+
Sbjct: 285  RIIEFPDKPSSS 296


>ref|XP_002299902.1| predicted protein [Populus trichocarpa] gi|222847160|gb|EEE84707.1|
            predicted protein [Populus trichocarpa]
          Length = 494

 Score =  172 bits (437), Expect = 2e-40
 Identities = 116/285 (40%), Positives = 159/285 (55%), Gaps = 2/285 (0%)
 Frame = +1

Query: 172  TIRRARW-HAXXXXXXKILNIPRRHHRKTTTKQLPRNNTPLSDIQRSTCRGKLESLFDQE 348
            T RR +W +       +IL++PRR  RK    Q+P++N      QR   +GKLE LFDQE
Sbjct: 11   TSRRPKWQYPPAQPTPRILHLPRRPRRK----QVPKSNASKPSSQRDR-KGKLEVLFDQE 65

Query: 349  RVFSRTSVPIVLLNSFNDSXXXXXXXXXXXXXXXXXXXXXXXXXWRFQAEILRAECNFFR 528
            R F+R ++PI+++                               WRFQAE+LRAECN  R
Sbjct: 66   RGFARGAMPILMVGGIRGDQCLEEERRERVEERESVVMEEEK--WRFQAEMLRAECNLLR 123

Query: 529  MERDIALKKLELNCVQTKRTLRSAVETLVSGKEKIHEGKKMSSVXXXXXXXXXXXXXXXQ 708
            MER+IA+KK+E   VQ +R LRSAV  L+S ++ I +GK +  V               +
Sbjct: 124  MEREIAVKKMERRRVQMERILRSAVRALLSVRKGICDGKDVRMVLDEEIQELIEKLERLE 183

Query: 709  RSSGVRDFEFGKSSNFDKQANILQRKLEKLGSEGLLQNEDEKCV*EIRDMAESSLTIITS 888
            R SGV+D E  K SN D+Q +IL+R+LEK G E      DE CV EI++MAE+SL+I T+
Sbjct: 184  RRSGVKDLEGRKCSNLDRQVSILRRRLEKFGGE-----SDEICVKEIQEMAEASLSIKTN 238

Query: 889  WNIDQCSEDDQENRFKDVEVLRRKMVKL*KG-MLERMEEECGSMI 1020
                      +EN  + +E+LRRKM  L  G +LERME+E GSM+
Sbjct: 239  C---------KENNVQQMEMLRRKMEGLSNGSLLERMEDEYGSML 274


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