BLASTX nr result

ID: Coptis25_contig00014123 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00014123
         (969 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278337.1| PREDICTED: jmjC domain-containing protein 4-...   360   4e-97
emb|CBI14986.3| unnamed protein product [Vitis vinifera]              346   4e-93
ref|XP_002511357.1| transcription factor, putative [Ricinus comm...   342   6e-92
ref|XP_003522392.1| PREDICTED: jmjC domain-containing protein 4-...   340   2e-91
ref|XP_002322181.1| predicted protein [Populus trichocarpa] gi|2...   323   4e-86

>ref|XP_002278337.1| PREDICTED: jmjC domain-containing protein 4-like [Vitis vinifera]
          Length = 493

 Score =  360 bits (923), Expect = 4e-97
 Identities = 171/286 (59%), Positives = 214/286 (74%)
 Frame = +3

Query: 3    GTWTPLHADVFRSYSWSANVCGKKQWHFLSPSQCHHVFDRSMKNSVYDIFGDVSETKFPG 182
            GTWTPLHADVFRSYSWSANVCGKK+W FL PSQ H VFDR+MK+SVY+I  DV+E KFPG
Sbjct: 181  GTWTPLHADVFRSYSWSANVCGKKKWLFLPPSQSHLVFDRNMKSSVYNICEDVNEAKFPG 240

Query: 183  FKKAIWVECTQDQKEIIFVPSGWYHQVHNLDDTISINHNWFNAHNLSWVWKLLHTDYKVA 362
            FKKA+W+EC Q+Q EIIFVPSGWYHQVHNL+DTISINHNWFNA+NLSWVW LL  DY  A
Sbjct: 241  FKKAVWLECIQEQDEIIFVPSGWYHQVHNLEDTISINHNWFNAYNLSWVWDLLLKDYNEA 300

Query: 363  KEYIEDIQDICDNFEDLCQRNLAANTGMNFCDFFSFIVRFSFASLILLYLSDKVNHKPMK 542
            KEYIED++DICD+FE LCQRNLAANTGMNFCDFF FI  FSFA+L+ LY   +VN  P  
Sbjct: 301  KEYIEDVRDICDDFEGLCQRNLAANTGMNFCDFFIFIACFSFANLVQLYHLHRVNENPSW 360

Query: 543  GTLFSTQHVLSNLRFIKQVALSMKSVEALNENTSSLLEVREVLKEPLFVELCKDLERTYK 722
                  QH+  NL   +++ L MK+V+AL  + + LL++R+++ +  F+ELC  L+RTY+
Sbjct: 361  CLFPKAQHLALNLLSAQKIVLKMKTVDALAGDHALLLDLRKMMDDSKFLELCSGLDRTYR 420

Query: 723  MIYEQWEQRSDTNGPSIVNFDELELDKAAFPRVCRPEDLVRMIDFA 860
             I+++ +Q  D     +    +L+    +  ++  PEDLV  ID A
Sbjct: 421  GIHKEQQQNYDKKETLMDGLGDLDFIVKSCSQIYAPEDLVSFIDSA 466


>emb|CBI14986.3| unnamed protein product [Vitis vinifera]
          Length = 498

 Score =  346 bits (888), Expect = 4e-93
 Identities = 169/291 (58%), Positives = 210/291 (72%), Gaps = 5/291 (1%)
 Frame = +3

Query: 3    GTWTPLHADVFRSYSWSANVCGKKQWHFLSPSQCHHVFDRSMK-----NSVYDIFGDVSE 167
            GTWTPLHADVFRSYSWSANVCGKK+W FL PSQ H VFDR         SVY+I  DV+E
Sbjct: 181  GTWTPLHADVFRSYSWSANVCGKKKWLFLPPSQSHLVFDRHEYVFLHIYSVYNICEDVNE 240

Query: 168  TKFPGFKKAIWVECTQDQKEIIFVPSGWYHQVHNLDDTISINHNWFNAHNLSWVWKLLHT 347
             KFPGFKKA+W+EC Q+Q EIIFVPSGWYHQVHNL+DTISINHNWFNA+NLSWVW LL  
Sbjct: 241  AKFPGFKKAVWLECIQEQDEIIFVPSGWYHQVHNLEDTISINHNWFNAYNLSWVWDLLLK 300

Query: 348  DYKVAKEYIEDIQDICDNFEDLCQRNLAANTGMNFCDFFSFIVRFSFASLILLYLSDKVN 527
            DY  AKEYIED++DICD+FE LCQRNLAANTGMNFCDFF FI  FSFA+L+ LY   +VN
Sbjct: 301  DYNEAKEYIEDVRDICDDFEGLCQRNLAANTGMNFCDFFIFIACFSFANLVQLYHLHRVN 360

Query: 528  HKPMKGTLFSTQHVLSNLRFIKQVALSMKSVEALNENTSSLLEVREVLKEPLFVELCKDL 707
              P        QH+  NL   +++ L MK+V+AL  + + LL++R+++ +  F+ELC  L
Sbjct: 361  ENPSWCLFPKAQHLALNLLSAQKIVLKMKTVDALAGDHALLLDLRKMMDDSKFLELCSGL 420

Query: 708  ERTYKMIYEQWEQRSDTNGPSIVNFDELELDKAAFPRVCRPEDLVRMIDFA 860
            +RTY+ I+++ +Q  D     +    +L+    +  ++  PEDLV  ID A
Sbjct: 421  DRTYRGIHKEQQQNYDKKETLMDGLGDLDFIVKSCSQIYAPEDLVSFIDSA 471


>ref|XP_002511357.1| transcription factor, putative [Ricinus communis]
            gi|223550472|gb|EEF51959.1| transcription factor,
            putative [Ricinus communis]
          Length = 462

 Score =  342 bits (878), Expect = 6e-92
 Identities = 166/294 (56%), Positives = 215/294 (73%), Gaps = 3/294 (1%)
 Frame = +3

Query: 3    GTWTPLHADVFRSYSWSANVCGKKQWHFLSPSQCHHVFDRSMKNSVYDIFGDVSETKFPG 182
            G+WTPLHADVFRSYSWSAN+CGKK+W FLSPSQCH VFDR+MKN+VY+IF DVSET+FPG
Sbjct: 176  GSWTPLHADVFRSYSWSANICGKKKWIFLSPSQCHLVFDRNMKNTVYNIFEDVSETQFPG 235

Query: 183  FKKAIWVECTQDQKEIIFVPSGWYHQVHNLDDTISINHNWFNAHNLSWVWKLLHTDYKVA 362
            FKKAIW+EC Q+Q EIIFVPS WYHQVHNL+DTISINHNWFNA+NLSWVW LL  DYK A
Sbjct: 236  FKKAIWLECIQNQNEIIFVPSRWYHQVHNLEDTISINHNWFNAYNLSWVWDLLWEDYKEA 295

Query: 363  KEYIEDIQDICDNFEDLCQRNLAANTGMNFCDFFSFIVRFSFASLILLYLSDK---VNHK 533
            KEYIEDI+DICD+FE +CQRNLAANTGMNF DFF F+  F  A+++  Y  D+    +H+
Sbjct: 296  KEYIEDIRDICDDFEGVCQRNLAANTGMNFIDFFIFLAPFFLANVVQHYCRDRDSETSHR 355

Query: 534  PMKGTLFSTQHVLSNLRFIKQVALSMKSVEALNENTSSLLEVREVLKEPLFVELCKDLER 713
              K     T+H+  NL  I+++AL M+S E         L+++E++++P F++L  D+ R
Sbjct: 356  TSK----VTRHLAFNLASIQKIALKMRSTEGETGTGGYFLDLKEIVEDPKFLKLYMDMGR 411

Query: 714  TYKMIYEQWEQRSDTNGPSIVNFDELELDKAAFPRVCRPEDLVRMIDFAFTHFG 875
             Y MI+EQ + R++ +    +  D L+   +    +C  ED V+ +D+     G
Sbjct: 412  IYGMIHEQ-QSRTNRDIEKAMEDDILDYSFS----ICTLEDFVKFVDYTVRKLG 460


>ref|XP_003522392.1| PREDICTED: jmjC domain-containing protein 4-like [Glycine max]
          Length = 492

 Score =  340 bits (873), Expect = 2e-91
 Identities = 167/292 (57%), Positives = 210/292 (71%), Gaps = 1/292 (0%)
 Frame = +3

Query: 3    GTWTPLHADVFRSYSWSANVCGKKQWHFLSPSQCHHVFDRSMKNSVYDIFGDVSETKFPG 182
            G+WTPLHADVFRSYSWS NVCGKK+W FL PSQCH VFDR+MKN VY+IF +VS +KFPG
Sbjct: 189  GSWTPLHADVFRSYSWSGNVCGKKRWLFLDPSQCHLVFDRNMKNCVYNIFDEVSNSKFPG 248

Query: 183  FKKAIWVECTQDQKEIIFVPSGWYHQVHNLDDTISINHNWFNAHNLSWVWKLLHTDYKVA 362
            F +AIW+ECTQ+  EIIFVPSGWYHQVHNL+DTISINHNWFNA+NLSWVW LL  DY  A
Sbjct: 249  FSEAIWLECTQNAGEIIFVPSGWYHQVHNLEDTISINHNWFNAYNLSWVWNLLLRDYNEA 308

Query: 363  KEYIEDIQDICDNFEDLCQRNLAANTGMNFCDFFSFIVRFSFASLILL-YLSDKVNHKPM 539
            KEYIEDI+DICD+FE LCQRNLAANTGMNF DFF+FI  F+ A+L+LL Y++ +  +   
Sbjct: 309  KEYIEDIKDICDDFEGLCQRNLAANTGMNFYDFFTFISYFALANLVLLRYMNRRYGNGTG 368

Query: 540  KGTLFSTQHVLSNLRFIKQVALSMKSVEALNENTSSLLEVREVLKEPLFVELCKDLERTY 719
              +  S QH   NL  ++++A  MKS+ AL  N   ++++ E  ++P F +LC  + RTY
Sbjct: 369  SSSTIS-QHFSMNLGCLRKIASEMKSMHALEGNHDYVVDMIEAFEDPRFSKLCMHVGRTY 427

Query: 720  KMIYEQWEQRSDTNGPSIVNFDELELDKAAFPRVCRPEDLVRMIDFAFTHFG 875
             MI EQ     D    S+ +  +L   K+   ++  PEDL++ ID      G
Sbjct: 428  IMIQEQSYLSLDFECTSMCDLVDLNDMKSYTSQIYTPEDLIKFIDNGVAELG 479


>ref|XP_002322181.1| predicted protein [Populus trichocarpa] gi|222869177|gb|EEF06308.1|
            predicted protein [Populus trichocarpa]
          Length = 553

 Score =  323 bits (828), Expect = 4e-86
 Identities = 165/306 (53%), Positives = 206/306 (67%), Gaps = 20/306 (6%)
 Frame = +3

Query: 3    GTWTPLHADVFRSYSWSANVCGKKQWHFLSPSQCHHVFDRSMKNSVYDIFGDVSETKFPG 182
            G+WTPLHADVFRSYSWSANVCGKK+W FL PSQCH VFDR  K+ VYDIF D SET FPG
Sbjct: 227  GSWTPLHADVFRSYSWSANVCGKKKWLFLPPSQCHLVFDRGFKSCVYDIFDDASETNFPG 286

Query: 183  FKKAIWVECTQDQKEIIFVPSGWYHQVHN--------------------LDDTISINHNW 302
            FKKA+W+EC+Q+Q EIIFVPSGWYHQVHN                    L+DTISINHNW
Sbjct: 287  FKKALWLECSQEQNEIIFVPSGWYHQVHNMQKAFDILETSDCFLIQIIWLEDTISINHNW 346

Query: 303  FNAHNLSWVWKLLHTDYKVAKEYIEDIQDICDNFEDLCQRNLAANTGMNFCDFFSFIVRF 482
            FNA+NLSWV  LL  DYK AKEYIEDI+DICD+FE LCQRNLAANTGMNF DFF F+ RF
Sbjct: 347  FNAYNLSWVLDLLSRDYKEAKEYIEDIRDICDDFEGLCQRNLAANTGMNFSDFFIFLSRF 406

Query: 483  SFASLILLYLSDKVNHKPMKGTLFSTQHVLSNLRFIKQVALSMKSVEALNENTSSLLEVR 662
              A+++ LY   +     +  +    +H++ NL  I+++AL + S++ +  N    L++ 
Sbjct: 407  FSANILQLYCQLREEGISVWSSSKMAKHLVFNLASIRRIALKLTSMDVVAGNHGFFLDLM 466

Query: 663  EVLKEPLFVELCKDLERTYKMIYEQWEQRSDTNGPSIVNFDELELDKAAFPRVCRPEDLV 842
            E L +P F++L  D+ R Y  I+EQ     DT    +V F    LD ++  R   PED V
Sbjct: 467  ETLDDPNFLKLFIDVGRAYGKIHEQQNCSCDTKKAWMVEF----LDYSSHIR--NPEDFV 520

Query: 843  RMIDFA 860
            + ID++
Sbjct: 521  KFIDYS 526


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