BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00014104
         (1467 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273237.1| PREDICTED: uncharacterized protein LOC100251...   378   e-114
ref|XP_004144716.1| PREDICTED: nucleoporin Nup43-like [Cucumis s...   360   e-110
ref|XP_003518229.1| PREDICTED: uncharacterized protein LOC100795...   364   e-110
ref|XP_003549530.1| PREDICTED: nucleoporin Nup43-like [Glycine max]   355   e-108
ref|XP_003610262.1| Nucleoporin Nup43 [Medicago truncatula] gi|3...   340   e-102

>ref|XP_002273237.1| PREDICTED: uncharacterized protein LOC100251872 [Vitis vinifera]
            gi|297743697|emb|CBI36580.3| unnamed protein product
            [Vitis vinifera]
          Length = 357

 Score =  378 bits (971), Expect(2) = e-114
 Identities = 190/295 (64%), Positives = 226/295 (76%), Gaps = 1/295 (0%)
 Frame = +1

Query: 250  PPFLTHQSSWASPSRISSLKVSQSGNKPVIAASTFEGSLHFLFVNPADVAIESELALLEK 429
            PP L  QSS +  SR+SSL +S S +KP+IAASTF GSLH L ++  D +++SE ++ EK
Sbjct: 63   PPSLNLQSSLSLSSRVSSLSLSLSAHKPLIAASTFSGSLHILLLD-FDASVQSEFSVPEK 121

Query: 430  GFCDGPISGIDLVENGSKCVCVGGDGRVSLVTVGD-SRLEKECVFDSQGLVSYNAAKWAS 606
                G IS +DL E+G +CV VG DGRV+LV  GD SRL    V+DS GLVSY AAKWAS
Sbjct: 122  SLHVGAISCVDLQESGVECVSVGEDGRVNLVAFGDGSRLSYRRVWDSDGLVSYTAAKWAS 181

Query: 607  PSEFATGGLGFSLQWWDQRKPGGPVSQFKGGWSSGGASGIVHSIDIHPSRKHICVAGGSL 786
            P+EFATGG GF LQWWD RKPGGPVSQFKG W+    SGIVHSIDIHPSRKH C+AGGSL
Sbjct: 182  PTEFATGGFGFGLQWWDLRKPGGPVSQFKGNWAQRTTSGIVHSIDIHPSRKHTCLAGGSL 241

Query: 787  GTVFAWDLRWQQQPILLSGIGXXXXXXXXXXXXXVWEVQYDCYKQSTNVNSMSSAQILSV 966
            GTVFAWDLRWQQQPI+LSG+G             VWEV+YD Y +++N  +MSS++IL  
Sbjct: 242  GTVFAWDLRWQQQPIILSGVGTSEVATHSPCESEVWEVKYDPYMRTSNFGNMSSSRILPA 301

Query: 967  LMCSEDGILAVVEQGEEHFEVLAEPCAINSLDINPQNPSDVICSLDWESIAFITR 1131
            ++CSEDGILAVVEQGEE  E+LAEPCAINS DI+ QNPSDVICSL+WESIA ++R
Sbjct: 302  MLCSEDGILAVVEQGEEPIELLAEPCAINSFDIDRQNPSDVICSLEWESIAILSR 356



 Score = 61.6 bits (148), Expect(2) = e-114
 Identities = 27/56 (48%), Positives = 40/56 (71%)
 Frame = +2

Query: 23  NLEIHKIPQSKYIDSIRWLPTVSAFDKFITMALHDSDSDENFVEIHSLNTSIPPFL 190
           +L+IH++PQS+YID++R+LP  S  D+F  +AL D+ S    ++IHSL  S PP L
Sbjct: 11  SLQIHRLPQSQYIDAVRFLPAFSGLDRFAVLALFDTHSSSPSLQIHSLPKSTPPSL 66


>ref|XP_004144716.1| PREDICTED: nucleoporin Nup43-like [Cucumis sativus]
            gi|449511548|ref|XP_004163987.1| PREDICTED: nucleoporin
            Nup43-like [Cucumis sativus]
          Length = 350

 Score =  360 bits (923), Expect(2) = e-110
 Identities = 176/294 (59%), Positives = 215/294 (73%)
 Frame = +1

Query: 250  PPFLTHQSSWASPSRISSLKVSQSGNKPVIAASTFEGSLHFLFVNPADVAIESELALLEK 429
            P  +   S+W SPSR+SSLK SQ    P++ AST+ GSLH L V P + +++SEL++ EK
Sbjct: 60   PLDIVPHSTWISPSRVSSLKTSQLHRNPLVFASTYTGSLHVLSVEPMEASLDSELSVPEK 119

Query: 430  GFCDGPISGIDLVENGSKCVCVGGDGRVSLVTVGDSRLEKECVFDSQGLVSYNAAKWASP 609
               DGPIS +D+++ G +C+ V  DGRVSLV+VG+S L    +FDS GLVSYNA KWASP
Sbjct: 120  MLHDGPISCVDVMDGGGECLTVSEDGRVSLVSVGESGLSYRRIFDSNGLVSYNAVKWASP 179

Query: 610  SEFATGGLGFSLQWWDQRKPGGPVSQFKGGWSSGGASGIVHSIDIHPSRKHICVAGGSLG 789
            +EF TGG GFSLQWWDQRKPGG VSQFK  W    ASGIVH IDIHPSRKH C+AGGS G
Sbjct: 180  TEFVTGGCGFSLQWWDQRKPGGAVSQFKANW----ASGIVHCIDIHPSRKHTCLAGGSFG 235

Query: 790  TVFAWDLRWQQQPILLSGIGXXXXXXXXXXXXXVWEVQYDCYKQSTNVNSMSSAQILSVL 969
            TVFAWDLR QQQPI+LSG+              VWEV YD Y +S N+  MSS QIL  +
Sbjct: 236  TVFAWDLRSQQQPIILSGLEGSKTSNPSPCESEVWEVHYDPYIKSGNLGGMSSTQILPAM 295

Query: 970  MCSEDGILAVVEQGEEHFEVLAEPCAINSLDINPQNPSDVICSLDWESIAFITR 1131
            +CSEDGIL  +EQG+E  E+LAEPCAIN  DIN Q+PS+VIC+L+WES+A ++R
Sbjct: 296  ICSEDGILTSIEQGKEPVELLAEPCAINGFDINRQHPSEVICNLEWESVAILSR 349



 Score = 66.2 bits (160), Expect(2) = e-110
 Identities = 28/56 (50%), Positives = 39/56 (69%)
 Frame = +2

Query: 29  EIHKIPQSKYIDSIRWLPTVSAFDKFITMALHDSDSDENFVEIHSLNTSIPPFLTH 196
           +IH+ PQ KY+D +RWLP +SAF +F  +AL DSDSD + +EIHSL  +    + H
Sbjct: 11  QIHRFPQFKYVDGVRWLPPLSAFSRFAVIALFDSDSDSSSIEIHSLTQNPLDIVPH 66


>ref|XP_003518229.1| PREDICTED: uncharacterized protein LOC100795073 [Glycine max]
          Length = 346

 Score =  364 bits (934), Expect(2) = e-110
 Identities = 184/295 (62%), Positives = 215/295 (72%), Gaps = 2/295 (0%)
 Frame = +1

Query: 253  PF-LTHQSSWASPSRISSLKVSQSGNKPVIAASTFEGSLHFLFVNPADVAIESELALLEK 429
            PF L   SSW+SPSR+SSLK S    KP+I AST  GSLHFLF + +D ++ SE++L E 
Sbjct: 56   PFSLEPHSSWSSPSRVSSLKPSHFLQKPLIVASTSSGSLHFLFSDSSDASLLSEVSLPEG 115

Query: 430  GFCDGPISGIDLVENGSKCVCVGGDGRVSLVTVGDSRLEKECVFDSQGLVSYNAAKWASP 609
                 P S +DL++ G +CV VG DG+V+LV +GDS L    +FDS GLVSY A +WASP
Sbjct: 116  ALHSLPASCVDLMDGGVECVSVGEDGKVNLVGIGDSNLNYRRLFDSAGLVSYTAVRWASP 175

Query: 610  SEFATGGLGFSLQWWDQRKPGGPVSQFKGGWSSGGASGIVHSIDIHPSRKHICVAGGSLG 789
             EFATGG GF LQWWDQRKPGGPVSQFKG W     SGIVHSIDIHPSRKH C+AGGSLG
Sbjct: 176  MEFATGGFGFGLQWWDQRKPGGPVSQFKGNWDKKLTSGIVHSIDIHPSRKHTCLAGGSLG 235

Query: 790  TVFAWDLRWQQQPILLSGIGXXXXXXXXXXXXXVWEVQYD-CYKQSTNVNSMSSAQILSV 966
            TVFAWDLRWQQQPI+LSG G             VWEVQYD C K +T     SS +IL  
Sbjct: 236  TVFAWDLRWQQQPIILSGAGAANTAVQSISESEVWEVQYDRCIKSNT-----SSTRILPS 290

Query: 967  LMCSEDGILAVVEQGEEHFEVLAEPCAINSLDINPQNPSDVICSLDWESIAFITR 1131
            ++CSEDGIL V+EQGEE  E+LAEPCAINS DI+  NPSDVICSL+WE++A +TR
Sbjct: 291  MICSEDGILGVIEQGEEPIELLAEPCAINSFDIDRHNPSDVICSLEWEAVAILTR 345



 Score = 61.6 bits (148), Expect(2) = e-110
 Identities = 25/46 (54%), Positives = 35/46 (76%)
 Frame = +2

Query: 32  IHKIPQSKYIDSIRWLPTVSAFDKFITMALHDSDSDENFVEIHSLN 169
           I + PQ +Y+D++RWLP  SAFD+F  +AL D DSD + +EIH+LN
Sbjct: 8   IQRFPQHRYVDAVRWLPLQSAFDRFAVLALFDFDSDASSIEIHALN 53


>ref|XP_003549530.1| PREDICTED: nucleoporin Nup43-like [Glycine max]
          Length = 347

 Score =  355 bits (911), Expect(2) = e-108
 Identities = 181/298 (60%), Positives = 211/298 (70%), Gaps = 4/298 (1%)
 Frame = +1

Query: 250  PPFLTHQSSWASPSRISSLKVSQSGNKPVIAASTFEGSLHFLFVNPADVAIESELALLEK 429
            P  L   SSW+SPSR+SSLK S    KP+I AST  GSLHFLF + +   +ESE+++ E 
Sbjct: 54   PLSLEPHSSWSSPSRVSSLKASHFLQKPLIVASTSSGSLHFLFSDSSVATLESEVSIPEG 113

Query: 430  GFCDGPISGIDLVENGSKCVCVGGDGRVSLVTVGDSRLEKECVFDSQGLVSYNAAKWASP 609
                 P S +DL++ G +CV VG DG+V+LV +GDS L    +FDS GLVSY A  WASP
Sbjct: 114  ALHSVPASCVDLLDGGVECVTVGEDGKVNLVGIGDSNLNYRRLFDSAGLVSYTAVSWASP 173

Query: 610  SEFATGGLGFSLQWWDQRKPGGPVSQFKGGWSSGGASGIVHSIDIHPSRKHICVAGGSLG 789
             EFATGG GF L WWDQRKPGGPVSQFKG W     SGIVHSIDIHPSRKH C+AGGSLG
Sbjct: 174  MEFATGGYGFGLHWWDQRKPGGPVSQFKGNWDKKLTSGIVHSIDIHPSRKHTCLAGGSLG 233

Query: 790  TVFAWDLRWQQQPILLSGIG---XXXXXXXXXXXXXVWEVQYD-CYKQSTNVNSMSSAQI 957
            TVFAWDLRWQQQPI+LSG G                VWEVQYD C K +T     SS +I
Sbjct: 234  TVFAWDLRWQQQPIILSGAGAGAGGNTAVQSISESEVWEVQYDRCIKPNT-----SSTRI 288

Query: 958  LSVLMCSEDGILAVVEQGEEHFEVLAEPCAINSLDINPQNPSDVICSLDWESIAFITR 1131
            L  ++CSEDGIL V+EQGEE  E+LAEPCAINS DI+  NPSDVICSL+WE++A +TR
Sbjct: 289  LPSMICSEDGILGVIEQGEEPIELLAEPCAINSFDIDRHNPSDVICSLEWEAVAILTR 346



 Score = 63.9 bits (154), Expect(2) = e-108
 Identities = 27/46 (58%), Positives = 35/46 (76%)
 Frame = +2

Query: 32  IHKIPQSKYIDSIRWLPTVSAFDKFITMALHDSDSDENFVEIHSLN 169
           I + PQ KY+D++RWLP  SAFD+F  +AL D DSD + +EIHSLN
Sbjct: 6   IQRFPQHKYVDAVRWLPLQSAFDRFAVLALFDFDSDASSIEIHSLN 51


>ref|XP_003610262.1| Nucleoporin Nup43 [Medicago truncatula] gi|355511317|gb|AES92459.1|
            Nucleoporin Nup43 [Medicago truncatula]
          Length = 351

 Score =  340 bits (871), Expect(2) = e-102
 Identities = 177/293 (60%), Positives = 204/293 (69%), Gaps = 5/293 (1%)
 Frame = +1

Query: 268  QSSWASPSRISSLKVSQSGNKPVIAASTFEGSLHFLFVNPADVAIESELALLEKGFCDGP 447
            QSSW SPS ISS+K SQ   K +IA+ST  GSLHFLF +  D  + SE+++ E       
Sbjct: 63   QSSWTSPSPISSIKSSQFLQKSIIASSTSSGSLHFLFADSTDARLVSEVSVPENELHLEG 122

Query: 448  ISGIDLVENGSKCVCVGGDGRVSLVTVGDSRLEKECVFDSQGLVSYNAAKWASPSEFATG 627
               IDL++ G +CV VG DGR++LVTVGDS L    +FDS GLVSY + KWASP EFATG
Sbjct: 123  KCCIDLMDGGVECVTVGDDGRINLVTVGDSNLNYRRLFDSGGLVSYTSVKWASPVEFATG 182

Query: 628  GLGFSLQWWDQRKPGGPVSQFKGGWSSGGASGIVHSIDIHPSRKHICVAGGSLGTVFAWD 807
            G GF L WWDQRKPGGPVSQFKG W     SGIVHSIDIHPSRKH C+A GSLGTV AWD
Sbjct: 183  GYGFGLHWWDQRKPGGPVSQFKGNWDKNLNSGIVHSIDIHPSRKHTCLAAGSLGTVLAWD 242

Query: 808  LRWQQQPILLSGI----GXXXXXXXXXXXXXVWEVQYD-CYKQSTNVNSMSSAQILSVLM 972
            LR QQQPI+LSG     G             VWEVQYD C K +T     SS +IL  ++
Sbjct: 243  LRMQQQPIILSGTGAGDGAGNTAVQSISESEVWEVQYDRCIKSNT-----SSTRILPAMI 297

Query: 973  CSEDGILAVVEQGEEHFEVLAEPCAINSLDINPQNPSDVICSLDWESIAFITR 1131
            CSEDGIL V+EQGEE  E+LAEPCAINS DI+  NP DVICSL+WES+A +TR
Sbjct: 298  CSEDGILGVIEQGEEPIELLAEPCAINSFDIDRHNPLDVICSLEWESVAILTR 350



 Score = 62.0 bits (149), Expect(2) = e-102
 Identities = 27/50 (54%), Positives = 37/50 (74%)
 Frame = +2

Query: 14  VPDNLEIHKIPQSKYIDSIRWLPTVSAFDKFITMALHDSDSDENFVEIHS 163
           V  N EIH+ PQ KYID++RWLP +SAF++F  +A  D DS+ + +EIHS
Sbjct: 3   VTANSEIHRFPQYKYIDAVRWLPVLSAFNRFAVLATSDFDSNLSSIEIHS 52