BLASTX nr result

ID: Coptis25_contig00014065 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00014065
         (458 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278573.1| PREDICTED: uncharacterized membrane protein ...   137   1e-30
ref|XP_002317329.1| predicted protein [Populus trichocarpa] gi|2...   129   2e-28
ref|XP_003596939.1| Membrane protein, putative [Medicago truncat...   127   9e-28
gb|AFK33902.1| unknown [Medicago truncatula]                          127   9e-28
ref|XP_003540286.1| PREDICTED: uncharacterized membrane protein ...   123   1e-26

>ref|XP_002278573.1| PREDICTED: uncharacterized membrane protein yuiD [Vitis vinifera]
           gi|297737478|emb|CBI26679.3| unnamed protein product
           [Vitis vinifera]
          Length = 166

 Score =  137 bits (344), Expect = 1e-30
 Identities = 81/142 (57%), Positives = 95/142 (66%), Gaps = 9/142 (6%)
 Frame = +2

Query: 59  MNEVVTASDVSTTIRSSNQSQ---PSILPLLSAF------QFLKLFTTXXXXXXXXXXXX 211
           M+EV+TA+D S+   S++      P+ LPLLSAF      QFLKLFTT            
Sbjct: 1   MDEVITAADASSIAGSTSSGSSIIPNNLPLLSAFLSFALAQFLKLFTTWYKEKRWDS--- 57

Query: 212 XXXXXXXXXXXXXXRRIFGSGGMPSSHSATVSALAVAIGFEDGIGGSSFALPIVLAAVVM 391
                         RR+ GSGGMPSSHSATV+ALAVAIGF++G GGS+FA+ +VLA VVM
Sbjct: 58  --------------RRMLGSGGMPSSHSATVTALAVAIGFQEGTGGSAFAIAVVLACVVM 103

Query: 392 YDASGVRLHAGRQAELLNQIVC 457
           YDASGVRLHAGRQAELLNQIVC
Sbjct: 104 YDASGVRLHAGRQAELLNQIVC 125


>ref|XP_002317329.1| predicted protein [Populus trichocarpa] gi|222860394|gb|EEE97941.1|
           predicted protein [Populus trichocarpa]
          Length = 168

 Score =  129 bits (325), Expect = 2e-28
 Identities = 78/142 (54%), Positives = 92/142 (64%), Gaps = 9/142 (6%)
 Frame = +2

Query: 59  MNEVVTASDVSTTIRSSNQ---SQPSILPLLSAF------QFLKLFTTXXXXXXXXXXXX 211
           M+EV+TA+D S+  RS+     S PS +PLLSAF      QFLKLFTT            
Sbjct: 1   MDEVMTAADASSRYRSATSPPASLPSNIPLLSAFLAFSLAQFLKLFTTWFKEKRWDA--- 57

Query: 212 XXXXXXXXXXXXXXRRIFGSGGMPSSHSATVSALAVAIGFEDGIGGSSFALPIVLAAVVM 391
                         RR+ GSGGMPSSHSATV+ALA AIG ++G G  +FA+ +VLA VVM
Sbjct: 58  --------------RRMLGSGGMPSSHSATVTALATAIGLQEGTGAPAFAVALVLACVVM 103

Query: 392 YDASGVRLHAGRQAELLNQIVC 457
           YDA+GVRLHAGRQAELLNQIVC
Sbjct: 104 YDATGVRLHAGRQAELLNQIVC 125


>ref|XP_003596939.1| Membrane protein, putative [Medicago truncatula]
           gi|355485987|gb|AES67190.1| Membrane protein, putative
           [Medicago truncatula]
          Length = 167

 Score =  127 bits (319), Expect = 9e-28
 Identities = 76/141 (53%), Positives = 91/141 (64%), Gaps = 8/141 (5%)
 Frame = +2

Query: 59  MNEVVTASDVSTTIRSSNQS--QPSILPLLSAF------QFLKLFTTXXXXXXXXXXXXX 214
           MNEV+T +DV+ +  SS       S LPL+SAF      QFLK+FTT             
Sbjct: 1   MNEVLTRADVTASTASSLSPFVPSSNLPLISAFLSFALAQFLKIFTTWYKEKRWDS---- 56

Query: 215 XXXXXXXXXXXXXRRIFGSGGMPSSHSATVSALAVAIGFEDGIGGSSFALPIVLAAVVMY 394
                        +R+  SGGMPSSHSATVSALAVAIGF++GIG S FA+ ++LA +VMY
Sbjct: 57  -------------KRLLDSGGMPSSHSATVSALAVAIGFQEGIGSSVFAIAVILACIVMY 103

Query: 395 DASGVRLHAGRQAELLNQIVC 457
           DA+GVRLHAGRQAELLNQIVC
Sbjct: 104 DATGVRLHAGRQAELLNQIVC 124


>gb|AFK33902.1| unknown [Medicago truncatula]
          Length = 167

 Score =  127 bits (319), Expect = 9e-28
 Identities = 76/141 (53%), Positives = 91/141 (64%), Gaps = 8/141 (5%)
 Frame = +2

Query: 59  MNEVVTASDVSTTIRSSNQS--QPSILPLLSAF------QFLKLFTTXXXXXXXXXXXXX 214
           MNEV+T +DV+ +  SS       S LPL+SAF      QFLK+FTT             
Sbjct: 1   MNEVLTRADVTASTASSLSPLVPSSNLPLISAFLSFALAQFLKIFTTWYKEKRWDS---- 56

Query: 215 XXXXXXXXXXXXXRRIFGSGGMPSSHSATVSALAVAIGFEDGIGGSSFALPIVLAAVVMY 394
                        +R+  SGGMPSSHSATVSALAVAIGF++GIG S FA+ ++LA +VMY
Sbjct: 57  -------------KRLLDSGGMPSSHSATVSALAVAIGFQEGIGSSVFAIAVILACIVMY 103

Query: 395 DASGVRLHAGRQAELLNQIVC 457
           DA+GVRLHAGRQAELLNQIVC
Sbjct: 104 DATGVRLHAGRQAELLNQIVC 124


>ref|XP_003540286.1| PREDICTED: uncharacterized membrane protein yuiD-like [Glycine max]
          Length = 170

 Score =  123 bits (309), Expect = 1e-26
 Identities = 72/144 (50%), Positives = 93/144 (64%), Gaps = 11/144 (7%)
 Frame = +2

Query: 59  MNEVVTASDVSTTIRSSNQSQ-----PSILPLLSAF------QFLKLFTTXXXXXXXXXX 205
           M+EV+T +DV+  ++++  +      P+ LPLLSAF      QFLK+FT+          
Sbjct: 1   MSEVLTMADVTANLQAATTASTPYALPTNLPLLSAFLSFALAQFLKIFTSWYKEKRWDS- 59

Query: 206 XXXXXXXXXXXXXXXXRRIFGSGGMPSSHSATVSALAVAIGFEDGIGGSSFALPIVLAAV 385
                           +R+  SGGMPSSHSATVSALAVAIG ++G G ++FA+ +VLA +
Sbjct: 60  ----------------KRLLDSGGMPSSHSATVSALAVAIGLQEGAGSTAFAVAVVLACI 103

Query: 386 VMYDASGVRLHAGRQAELLNQIVC 457
           VMYDASGVRLHAGRQAELLNQIVC
Sbjct: 104 VMYDASGVRLHAGRQAELLNQIVC 127


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