BLASTX nr result

ID: Coptis25_contig00014062 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00014062
         (513 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003621967.1| Heat shock protein [Medicago truncatula] gi|...    59   4e-07
gb|ABN09155.1| Polynucleotidyl transferase, Ribonuclease H fold ...    55   6e-06
ref|XP_003607038.1| hypothetical protein MTR_4g071500 [Medicago ...    55   8e-06

>ref|XP_003621967.1| Heat shock protein [Medicago truncatula]
           gi|357503391|ref|XP_003621984.1| Heat shock protein
           [Medicago truncatula] gi|355496982|gb|AES78185.1| Heat
           shock protein [Medicago truncatula]
           gi|355496999|gb|AES78202.1| Heat shock protein [Medicago
           truncatula]
          Length = 553

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 32/81 (39%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
 Frame = -3

Query: 448 RDWKNVWVESDSVAAVSAFGSGKL-PWQIKDRWNKCKSAMHQL--MITSTWREANFSADQ 278
           R+W N+W+ESDS  A  A  S  + PWQ+K+RW  C   M  +  MIT  +RE N  AD+
Sbjct: 358 RNWNNLWIESDSKLANLAVKSPNIVPWQLKNRWLNCVHLMSNMNCMITHIYREGNHCADK 417

Query: 277 AAKKATTMSSESHFLYHGKPP 215
            A+    +     FL+   PP
Sbjct: 418 LARLGLALDG---FLWWNSPP 435


>gb|ABN09155.1| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
           truncatula]
          Length = 99

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 27/73 (36%), Positives = 45/73 (61%), Gaps = 3/73 (4%)
 Frame = -3

Query: 457 SKKRDWKNVWVESDSVAAVSAFGSGKL-PWQIKDRWNKCKSAMHQL--MITSTWREANFS 287
           +K+R +  +W+E+DS  AV AF S  L PW+I++RW+ C   +  +  +IT  +RE N  
Sbjct: 7   AKQRGYSRLWIETDSKLAVLAFKSSNLIPWKIRNRWDNCMEYISNIAFLITHIYREGNVC 66

Query: 286 ADQAAKKATTMSS 248
           AD+ A    +++S
Sbjct: 67  ADKFANIGLSLNS 79


>ref|XP_003607038.1| hypothetical protein MTR_4g071500 [Medicago truncatula]
           gi|355508093|gb|AES89235.1| hypothetical protein
           MTR_4g071500 [Medicago truncatula]
          Length = 149

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 29/88 (32%), Positives = 50/88 (56%), Gaps = 3/88 (3%)
 Frame = -3

Query: 463 VSSKKRDWKNVWVESDSVAAVSAFGSGKL-PWQIKDRWNKCKSAMHQL--MITSTWREAN 293
           ++++KR W N+W++ DS   + AF S  L PW +++RW  CK  + +L  ++T  +RE N
Sbjct: 57  INNEKRIWGNLWLDIDSTMVILAFKSSSLVPWNLRNRWFNCKLLIIKLNFIVTRVFREEN 116

Query: 292 FSADQAAKKATTMSSESHFLYHGKPPWL 209
              D  A    +++S   F+Y  + P L
Sbjct: 117 QCVDNLANIGLSLTS---FVYWNELPLL 141


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