BLASTX nr result

ID: Coptis25_contig00014059 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00014059
         (418 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI39657.3| unnamed protein product [Vitis vinifera]              214   8e-54
ref|XP_002280231.1| PREDICTED: pleiotropic drug resistance prote...   214   8e-54
emb|CAN65735.1| hypothetical protein VITISV_037751 [Vitis vinifera]   214   8e-54
ref|XP_002266393.2| PREDICTED: pleiotropic drug resistance prote...   212   3e-53
emb|CBI26001.3| unnamed protein product [Vitis vinifera]              212   3e-53

>emb|CBI39657.3| unnamed protein product [Vitis vinifera]
          Length = 1406

 Score =  214 bits (544), Expect = 8e-54
 Identities = 97/139 (69%), Positives = 122/139 (87%)
 Frame = -1

Query: 418 QVVSYIQQLVHITDATAVLALLQPAPETYNLFDDIILMGEGKIVYHGPCNHVLEFFEDCG 239
           Q+V+Y++QLVHI DAT +++LLQPAPET++LFDDIILM EG IVYHGPC+H+LEFFEDCG
Sbjct: 336 QIVAYLRQLVHIIDATILVSLLQPAPETFDLFDDIILMAEGIIVYHGPCSHILEFFEDCG 395

Query: 238 FKCPERKGTADFLQEVISKKDQQQYWCLTEQPHSYVSINQFSKKFMAYHIGKKLDDEVAE 59
           F+CPERKG ADFLQEVIS++DQ QYW  TEQ HSYVS++ FS+KF     GKKL++++++
Sbjct: 396 FRCPERKGVADFLQEVISRRDQAQYWYHTEQAHSYVSVHTFSRKFKESPFGKKLEEKLSK 455

Query: 58  PYDKSLSHKDALSFSTYSL 2
           P+DKS SHK+ALSFS YSL
Sbjct: 456 PFDKSHSHKNALSFSKYSL 474


>ref|XP_002280231.1| PREDICTED: pleiotropic drug resistance protein 3-like [Vitis
           vinifera]
          Length = 1448

 Score =  214 bits (544), Expect = 8e-54
 Identities = 97/139 (69%), Positives = 122/139 (87%)
 Frame = -1

Query: 418 QVVSYIQQLVHITDATAVLALLQPAPETYNLFDDIILMGEGKIVYHGPCNHVLEFFEDCG 239
           Q+V+Y++QLVHI DAT +++LLQPAPET++LFDDIILM EG IVYHGPC+H+LEFFEDCG
Sbjct: 378 QIVAYLRQLVHIIDATILVSLLQPAPETFDLFDDIILMAEGIIVYHGPCSHILEFFEDCG 437

Query: 238 FKCPERKGTADFLQEVISKKDQQQYWCLTEQPHSYVSINQFSKKFMAYHIGKKLDDEVAE 59
           F+CPERKG ADFLQEVIS++DQ QYW  TEQ HSYVS++ FS+KF     GKKL++++++
Sbjct: 438 FRCPERKGVADFLQEVISRRDQAQYWYHTEQAHSYVSVHTFSRKFKESPFGKKLEEKLSK 497

Query: 58  PYDKSLSHKDALSFSTYSL 2
           P+DKS SHK+ALSFS YSL
Sbjct: 498 PFDKSHSHKNALSFSKYSL 516


>emb|CAN65735.1| hypothetical protein VITISV_037751 [Vitis vinifera]
          Length = 1417

 Score =  214 bits (544), Expect = 8e-54
 Identities = 97/139 (69%), Positives = 122/139 (87%)
 Frame = -1

Query: 418 QVVSYIQQLVHITDATAVLALLQPAPETYNLFDDIILMGEGKIVYHGPCNHVLEFFEDCG 239
           Q+V+Y++QLVHI DAT +++LLQPAPET++LFDDIILM EG IVYHGPC+H+LEFFEDCG
Sbjct: 365 QIVAYLRQLVHIIDATILVSLLQPAPETFDLFDDIILMAEGIIVYHGPCSHILEFFEDCG 424

Query: 238 FKCPERKGTADFLQEVISKKDQQQYWCLTEQPHSYVSINQFSKKFMAYHIGKKLDDEVAE 59
           F+CPERKG ADFLQEVIS++DQ QYW  TEQ HSYVS++ FS+KF     GKKL++++++
Sbjct: 425 FRCPERKGVADFLQEVISRRDQAQYWYHTEQAHSYVSVHTFSRKFKESPFGKKLEEKLSK 484

Query: 58  PYDKSLSHKDALSFSTYSL 2
           P+DKS SHK+ALSFS YSL
Sbjct: 485 PFDKSHSHKNALSFSKYSL 503


>ref|XP_002266393.2| PREDICTED: pleiotropic drug resistance protein 3-like [Vitis
           vinifera]
          Length = 1492

 Score =  212 bits (539), Expect = 3e-53
 Identities = 98/139 (70%), Positives = 121/139 (87%)
 Frame = -1

Query: 418 QVVSYIQQLVHITDATAVLALLQPAPETYNLFDDIILMGEGKIVYHGPCNHVLEFFEDCG 239
           Q+V+ +QQL HIT+AT ++ LLQPAPET++LFDD+ILM EGKIVYHGP +HVL+FFE CG
Sbjct: 421 QIVTCLQQLAHITEATVLVTLLQPAPETFDLFDDLILMAEGKIVYHGPRSHVLQFFEHCG 480

Query: 238 FKCPERKGTADFLQEVISKKDQQQYWCLTEQPHSYVSINQFSKKFMAYHIGKKLDDEVAE 59
           FKCPERKG ADFLQEVISKKDQ+QYWC ++ P+ YVS++Q S+ F A  +G+KLD+E+AE
Sbjct: 481 FKCPERKGAADFLQEVISKKDQEQYWCRSD-PYRYVSVDQLSEMFKASPLGRKLDEELAE 539

Query: 58  PYDKSLSHKDALSFSTYSL 2
           PYDKS SHKDA+SFS YSL
Sbjct: 540 PYDKSQSHKDAISFSKYSL 558


>emb|CBI26001.3| unnamed protein product [Vitis vinifera]
          Length = 1486

 Score =  212 bits (539), Expect = 3e-53
 Identities = 98/139 (70%), Positives = 121/139 (87%)
 Frame = -1

Query: 418 QVVSYIQQLVHITDATAVLALLQPAPETYNLFDDIILMGEGKIVYHGPCNHVLEFFEDCG 239
           Q+V+ +QQL HIT+AT ++ LLQPAPET++LFDD+ILM EGKIVYHGP +HVL+FFE CG
Sbjct: 418 QIVTCLQQLAHITEATVLVTLLQPAPETFDLFDDLILMAEGKIVYHGPRSHVLQFFEHCG 477

Query: 238 FKCPERKGTADFLQEVISKKDQQQYWCLTEQPHSYVSINQFSKKFMAYHIGKKLDDEVAE 59
           FKCPERKG ADFLQEVISKKDQ+QYWC ++ P+ YVS++Q S+ F A  +G+KLD+E+AE
Sbjct: 478 FKCPERKGAADFLQEVISKKDQEQYWCRSD-PYRYVSVDQLSEMFKASPLGRKLDEELAE 536

Query: 58  PYDKSLSHKDALSFSTYSL 2
           PYDKS SHKDA+SFS YSL
Sbjct: 537 PYDKSQSHKDAISFSKYSL 555


Top