BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00014056
         (467 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526061.1| multidrug resistance pump, putative [Ricinus...    81   1e-13
ref|XP_002269315.1| PREDICTED: pentatricopeptide repeat-containi...    77   2e-12
ref|XP_002267905.1| PREDICTED: pentatricopeptide repeat-containi...    73   3e-11
emb|CAN79167.1| hypothetical protein VITISV_031236 [Vitis vinifera]    71   8e-11
gb|AAD15382.1| hypothetical protein [Arabidopsis thaliana]             67   2e-09

>ref|XP_002526061.1| multidrug resistance pump, putative [Ricinus communis]
           gi|223534642|gb|EEF36338.1| multidrug resistance pump,
           putative [Ricinus communis]
          Length = 589

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 51/133 (38%), Positives = 74/133 (55%), Gaps = 11/133 (8%)
 Frame = +1

Query: 100 MAFSTHISPSYLLKNSTLFNLFTRTPYFLS-NHNTNRVFLHFLQYPSFFSPNTIFNLPMN 276
           M   +  +PS L + S LF+ FT+ P+F S  +N + +   FL Y  +  P  + N+  +
Sbjct: 1   MLRGSSFAPS-LNRASPLFSFFTKIPFFSSFQNNFHTIRRPFLHYHYYVFPKPVCNIQAS 59

Query: 277 Q----------NHSLSTSVQCATMPMPIGRTMSKKAQNKAYRQSPEGVLHLKLDMCSKHG 426
           +          + +LS   Q         + +S KA+ KA ++SPEGVL  K+D CSKHG
Sbjct: 60  RFCMERRVQFCSSALSAKPQIHESSALAAKKVSNKAKKKARQESPEGVLRSKIDNCSKHG 119

Query: 427 DLVEALRLYDEAR 465
           +LVEALRLYDEAR
Sbjct: 120 NLVEALRLYDEAR 132


>ref|XP_002269315.1| PREDICTED: pentatricopeptide repeat-containing protein At2g32230,
           mitochondrial-like [Vitis vinifera]
          Length = 895

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 49/111 (44%), Positives = 62/111 (55%), Gaps = 10/111 (9%)
 Frame = +1

Query: 163 FTRTPYFLS-NHNTNRVFLHFLQY----PSFFSPNTIFNLPMNQ-----NHSLSTSVQCA 312
           F +TP      H   R  LH   +    P+ +SP     + MN+     N +LS + +  
Sbjct: 329 FAKTPILCHVGHTRLRPLLHGCSHHHFKPTTYSPYIKDRIFMNKSAHFSNLALSATNKYI 388

Query: 313 TMPMPIGRTMSKKAQNKAYRQSPEGVLHLKLDMCSKHGDLVEALRLYDEAR 465
                  +TMS KA+ KA R+SPEGVL  KLDMCSK GD+VEALRLYDEAR
Sbjct: 389 PESSAAAKTMSNKARKKARRESPEGVLRFKLDMCSKRGDVVEALRLYDEAR 439


>ref|XP_002267905.1| PREDICTED: pentatricopeptide repeat-containing protein At2g32230,
           mitochondrial-like [Vitis vinifera]
          Length = 526

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 37/62 (59%), Positives = 44/62 (70%)
 Frame = +1

Query: 280 NHSLSTSVQCATMPMPIGRTMSKKAQNKAYRQSPEGVLHLKLDMCSKHGDLVEALRLYDE 459
           N +LS + +       +  TMS KA+ KA R+SPEGVL  KLDMCSK GD+VEALRLYDE
Sbjct: 9   NLALSATNKYIPESSAVAETMSNKARKKARRESPEGVLRFKLDMCSKRGDVVEALRLYDE 68

Query: 460 AR 465
           AR
Sbjct: 69  AR 70


>emb|CAN79167.1| hypothetical protein VITISV_031236 [Vitis vinifera]
          Length = 696

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 39/83 (46%), Positives = 52/83 (62%), Gaps = 5/83 (6%)
 Frame = +1

Query: 232 PSFFSPNTIFNLPMNQN-HSLSTSVQCATMPMP----IGRTMSKKAQNKAYRQSPEGVLH 396
           P+ +SP     +  N++ H L+ ++      +P      +TMS K + KA R+SPEGVL 
Sbjct: 357 PTTYSPYIKDRIFTNKSAHFLNVALSATNKYIPESSAAAKTMSNKTRKKARRESPEGVLR 416

Query: 397 LKLDMCSKHGDLVEALRLYDEAR 465
            K DMCSKHGD+VEAL LYDEAR
Sbjct: 417 FKTDMCSKHGDVVEALHLYDEAR 439


>gb|AAD15382.1| hypothetical protein [Arabidopsis thaliana]
          Length = 416

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 40/90 (44%), Positives = 52/90 (57%), Gaps = 8/90 (8%)
 Frame = +1

Query: 220 FLQYPSFFSPNTIFNLPMNQNHSLSTSVQCATMPMPIGR--------TMSKKAQNKAYRQ 375
           FL +P  F P   F         LS S+   T+P+   +         +S+KA+ KA +Q
Sbjct: 15  FLSFP-IFPPERKF---------LSGSIHLCTLPLAAAKQSAASPSENLSRKAKKKAIQQ 64

Query: 376 SPEGVLHLKLDMCSKHGDLVEALRLYDEAR 465
           SPE +L  KLDMCSK GD++EALRLYDEAR
Sbjct: 65  SPEALLKQKLDMCSKKGDVLEALRLYDEAR 94