BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00014040
         (1184 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002299908.1| predicted protein [Populus trichocarpa] gi|2...   325   2e-86
ref|XP_002513501.1| heterogeneous nuclear ribonucleoprotein, put...   322   9e-86
ref|XP_002313339.1| predicted protein [Populus trichocarpa] gi|2...   317   3e-84
ref|XP_004142112.1| PREDICTED: heterogeneous nuclear ribonucleop...   316   6e-84
ref|XP_002285426.1| PREDICTED: heterogeneous nuclear ribonucleop...   316   6e-84

>ref|XP_002299908.1| predicted protein [Populus trichocarpa] gi|222847166|gb|EEE84713.1|
            predicted protein [Populus trichocarpa]
          Length = 253

 Score =  325 bits (832), Expect = 2e-86
 Identities = 167/255 (65%), Positives = 196/255 (76%), Gaps = 1/255 (0%)
 Frame = -3

Query: 1008 RDLGLKRQHIIDQLPSFYGVPPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVVRLRGLP 829
            R++G KRQ ++DQ PSFYG  PG                             VVRLRGLP
Sbjct: 9    REMGAKRQRMVDQGPSFYGNSPGSSFMYNTPPYGYVSQPPPPFP--------VVRLRGLP 60

Query: 828  FDCAEPDIVEFFRGLDIVDILLVNKDGRFSGEAFCVLGYPLQVDFALQRNRQSMGRRYIE 649
            FDC E D+ EFFRGLDIVD+L V+K G+F+GEAFCVLGYPLQVDFALQ+NRQ+MGRRY+E
Sbjct: 61   FDCTETDVAEFFRGLDIVDVLFVHKGGKFTGEAFCVLGYPLQVDFALQKNRQNMGRRYVE 120

Query: 648  VFRTKRQEYYSAIADEVSEGQLHSPPRRKARRAKSSDDNKDSAEHTGILRLRGLPYSAGK 469
            VFR+KRQ+YY AIA+EVSE +    PRR   RAKS D+ KD AEHTG+LRLRGLP+SAGK
Sbjct: 121  VFRSKRQDYYKAIANEVSESR--GSPRRNISRAKSYDEGKDLAEHTGVLRLRGLPFSAGK 178

Query: 468  DDLIDFFKDFELSEDGVHIVMNSDRRPSGEAYVEFASAEDSKAAMVKDRKTLGSRYIELF 289
            DD+++FFKDF LSED +HI MNS+ RP+GEA+VEFA+AEDSKAAM KDR TLGSRYIELF
Sbjct: 179  DDIMEFFKDFVLSEDLIHITMNSEGRPTGEAFVEFANAEDSKAAMAKDRMTLGSRYIELF 238

Query: 288  PSNQEDLDEAV-RGR 247
            PS+ E+LDEAV RGR
Sbjct: 239  PSSIEELDEAVSRGR 253


>ref|XP_002513501.1| heterogeneous nuclear ribonucleoprotein, putative [Ricinus communis]
            gi|223547409|gb|EEF48904.1| heterogeneous nuclear
            ribonucleoprotein, putative [Ricinus communis]
          Length = 260

 Score =  322 bits (826), Expect = 9e-86
 Identities = 166/255 (65%), Positives = 197/255 (77%), Gaps = 1/255 (0%)
 Frame = -3

Query: 1008 RDLGLKRQHIIDQLPSFYGVPPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVVRLRGLP 829
            R++G KRQ ++DQ PS+YG  PG                             VVRLRGLP
Sbjct: 17   REMGAKRQRLVDQGPSYYGTSPGPSFMYNPPPYGYVAQPPPFP---------VVRLRGLP 67

Query: 828  FDCAEPDIVEFFRGLDIVDILLVNKDGRFSGEAFCVLGYPLQVDFALQRNRQSMGRRYIE 649
            FDC E D+ EFF GLDIVD+L V+K G+F+GEAFCVLG PLQVDFALQ+NRQ+MGRRY+E
Sbjct: 68   FDCTETDVAEFFHGLDIVDVLFVHKGGKFTGEAFCVLGCPLQVDFALQKNRQNMGRRYVE 127

Query: 648  VFRTKRQEYYSAIADEVSEGQLHSPPRRKARRAKSSDDNKDSAEHTGILRLRGLPYSAGK 469
            VFR+KRQ+YY AIA+EVS+ +  SP  R+A RAKS D+ KDSAEHTG+LRLRGLP+SAGK
Sbjct: 128  VFRSKRQDYYKAIANEVSDARGGSP--RRAPRAKSYDEGKDSAEHTGVLRLRGLPFSAGK 185

Query: 468  DDLIDFFKDFELSEDGVHIVMNSDRRPSGEAYVEFASAEDSKAAMVKDRKTLGSRYIELF 289
            DD+++FFKDF LSED VHI MNS+ RP+GEA+VEFASAEDSKAAM KDR TLGSRYIELF
Sbjct: 186  DDIMEFFKDFVLSEDSVHITMNSEGRPTGEAFVEFASAEDSKAAMAKDRMTLGSRYIELF 245

Query: 288  PSNQEDLDEAV-RGR 247
            PS+ E+L+EAV RGR
Sbjct: 246  PSSIEELEEAVTRGR 260


>ref|XP_002313339.1| predicted protein [Populus trichocarpa] gi|222849747|gb|EEE87294.1|
            predicted protein [Populus trichocarpa]
          Length = 253

 Score =  317 bits (813), Expect = 3e-84
 Identities = 164/255 (64%), Positives = 191/255 (74%), Gaps = 1/255 (0%)
 Frame = -3

Query: 1008 RDLGLKRQHIIDQLPSFYGVPPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVVRLRGLP 829
            R++G KRQ I D+ PSFY   PG                             VVRLRGLP
Sbjct: 10   REMGAKRQRIADKGPSFYANSPGSSFMYNAPPNGYASQPPHFP---------VVRLRGLP 60

Query: 828  FDCAEPDIVEFFRGLDIVDILLVNKDGRFSGEAFCVLGYPLQVDFALQRNRQSMGRRYIE 649
            FDC E D+ EFF GLDIVD+L V+K G+FSGEAFCVLGYPLQVDFALQ+NRQ+MGRRY+E
Sbjct: 61   FDCTETDVAEFFHGLDIVDVLFVHKGGKFSGEAFCVLGYPLQVDFALQKNRQNMGRRYVE 120

Query: 648  VFRTKRQEYYSAIADEVSEGQLHSPPRRKARRAKSSDDNKDSAEHTGILRLRGLPYSAGK 469
            VFR+KRQ+YY  IA+EVSE +    PRR   RAKS D+ KDSAEHTG+LRLRGLP+SA K
Sbjct: 121  VFRSKRQDYYKTIANEVSESR--GSPRRNIPRAKSYDEGKDSAEHTGVLRLRGLPFSASK 178

Query: 468  DDLIDFFKDFELSEDGVHIVMNSDRRPSGEAYVEFASAEDSKAAMVKDRKTLGSRYIELF 289
            DD+++FFKDF LSED +HI MNS+ RP+GEA+VEFA+AEDSKAAM KDR TLGSRYIELF
Sbjct: 179  DDIMEFFKDFVLSEDSIHITMNSEGRPTGEAFVEFANAEDSKAAMAKDRMTLGSRYIELF 238

Query: 288  PSNQEDLDEAV-RGR 247
            PS+ E+ DEAV RGR
Sbjct: 239  PSSVEESDEAVSRGR 253


>ref|XP_004142112.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F-like [Cucumis
            sativus] gi|449502606|ref|XP_004161690.1| PREDICTED: LOW
            QUALITY PROTEIN: heterogeneous nuclear ribonucleoprotein
            F-like [Cucumis sativus]
          Length = 260

 Score =  316 bits (810), Expect = 6e-84
 Identities = 160/255 (62%), Positives = 194/255 (76%), Gaps = 1/255 (0%)
 Frame = -3

Query: 1008 RDLGLKRQHIIDQLPSFYGVPPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVVRLRGLP 829
            R++G KRQ I+DQ  S+YG  PG                             VVRLRGLP
Sbjct: 16   REMGAKRQRIVDQGSSYYGTSPGSGFMYNTSPYAYVNQPPPFP---------VVRLRGLP 66

Query: 828  FDCAEPDIVEFFRGLDIVDILLVNKDGRFSGEAFCVLGYPLQVDFALQRNRQSMGRRYIE 649
            FDC E D+VEFF GLDIVDIL V+K+G+F+GE FCVLGYPLQVDFALQRNRQ+MGRRY+E
Sbjct: 67   FDCMETDVVEFFHGLDIVDILFVHKNGKFTGEGFCVLGYPLQVDFALQRNRQNMGRRYVE 126

Query: 648  VFRTKRQEYYSAIADEVSEGQLHSPPRRKARRAKSSDDNKDSAEHTGILRLRGLPYSAGK 469
            +FR+ RQEYY A+A+EV + +  SP RR A R+K +D+ KDSAEHTG+LRLRGLPYSAGK
Sbjct: 127  IFRSNRQEYYKAVANEVFDARGGSP-RRSAPRSKLNDEVKDSAEHTGVLRLRGLPYSAGK 185

Query: 468  DDLIDFFKDFELSEDGVHIVMNSDRRPSGEAYVEFASAEDSKAAMVKDRKTLGSRYIELF 289
            DD++DFFK F LSED +H+ +NS+ RPSGEA+VEF++ +DSKAAM KDR TLGSRYIELF
Sbjct: 186  DDILDFFKGFNLSEDSIHLTLNSEGRPSGEAFVEFSNEQDSKAAMSKDRMTLGSRYIELF 245

Query: 288  PSNQEDLDEAV-RGR 247
            PS+ E+LDEA+ RGR
Sbjct: 246  PSSHEELDEAISRGR 260


>ref|XP_002285426.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F-like [Vitis
            vinifera]
          Length = 258

 Score =  316 bits (810), Expect = 6e-84
 Identities = 164/255 (64%), Positives = 196/255 (76%), Gaps = 1/255 (0%)
 Frame = -3

Query: 1008 RDLGLKRQHIIDQLPSFYGVPPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVVRLRGLP 829
            RD+G KRQ I DQ  SFYG  PG                             VVRLRGLP
Sbjct: 14   RDMGPKRQRITDQGSSFYGGSPGSNFMYNASPYSYIGQPPPFP---------VVRLRGLP 64

Query: 828  FDCAEPDIVEFFRGLDIVDILLVNKDGRFSGEAFCVLGYPLQVDFALQRNRQSMGRRYIE 649
            FDC+E D+ EFF  LDIVD+L V+K+GRF+GEAFCVLGYPLQV+FALQRNRQ+MGRRY+E
Sbjct: 65   FDCSEADVAEFFHSLDIVDVLFVHKNGRFTGEAFCVLGYPLQVEFALQRNRQNMGRRYVE 124

Query: 648  VFRTKRQEYYSAIADEVSEGQLHSPPRRKARRAKSSDDNKDSAEHTGILRLRGLPYSAGK 469
            VFR+KRQEYY AIA+EVS+ +  SP RR A +AKS+D+ K+SAEHTG+LRLRGLP+SA K
Sbjct: 125  VFRSKRQEYYKAIANEVSDTRGGSP-RRTAPKAKSNDEGKESAEHTGVLRLRGLPFSASK 183

Query: 468  DDLIDFFKDFELSEDGVHIVMNSDRRPSGEAYVEFASAEDSKAAMVKDRKTLGSRYIELF 289
            +D++DFFKDF LSED +H+ +NS+ RP+GEA+VEF +AEDSKAAM KDR TLGSRYIELF
Sbjct: 184  EDIMDFFKDFVLSEDSIHMTVNSEGRPTGEAFVEFTNAEDSKAAMAKDRMTLGSRYIELF 243

Query: 288  PSNQEDLDEAV-RGR 247
            PS+ E+LDEAV RGR
Sbjct: 244  PSSLEELDEAVARGR 258