BLASTX nr result
ID: Coptis25_contig00014039
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00014039 (792 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AAO00713.1| retrotransposon protein, putative, unclassified [... 100 5e-19 gb|AAP54692.2| retrotransposon protein, putative, unclassified [... 100 5e-19 gb|EAZ40370.1| hypothetical protein OsJ_24816 [Oryza sativa Japo... 97 4e-18 gb|AEJ07916.1| putative ZmL1 non-LTR retrotransposon protein [Ze... 96 9e-18 ref|XP_002444973.1| hypothetical protein SORBIDRAFT_07g002160 [S... 95 2e-17 >gb|AAO00713.1| retrotransposon protein, putative, unclassified [Oryza sativa Japonica Group] Length = 1557 Score = 100 bits (248), Expect = 5e-19 Identities = 61/225 (27%), Positives = 111/225 (49%), Gaps = 13/225 (5%) Frame = -2 Query: 704 WKRVHKVAKCISTGLVWSIGKGKDVRAMHQPWLI--LNEKPVILKDLVPMNMELENLIVE 531 W+ + + + G++W IG G+ VR PWL L+ +P+ K+ + V Sbjct: 1277 WQAIEHGLELVKKGIIWRIGNGRSVRVWQDPWLPRDLSRRPITPKNNCRIKW------VA 1330 Query: 530 DLMLANESGWDSNRLDQLFPPA-ISLIVKQVVVRPQNGEGDRLRWVGTRNGSLSVKSAY* 354 DLML N WD+N+++Q+F P + +I+K + E D + W + G+ SV++AY Sbjct: 1331 DLMLDNGM-WDANKINQIFLPVDVEIILK--LRTSSRDEEDFIAWHPDKLGNFSVRTAYR 1387 Query: 353 MMNEEGWIGQPSSFNCKSI------KAIWRTNTSAANQFFLWKLYMTSLPTGDLIARRGM 192 + E W + +S + + + +W+ N + + F W+ LPT D +R + Sbjct: 1388 LA--ENWAKEEASSSSSDVNIRKAWELLWKCNVPSKVKIFTWRATSNCLPTWDNKKKRNL 1445 Query: 191 EGDFLCPFCWTEQEDPLHIFFKCDWIKNVWF----TSNLKIKIDD 69 E C C E+ED +H +C K++W +++L +++DD Sbjct: 1446 EISDTCVICGMEKEDTMHALCRCPQAKHLWLAMKESNDLSLRMDD 1490 >gb|AAP54692.2| retrotransposon protein, putative, unclassified [Oryza sativa Japonica Group] Length = 1585 Score = 100 bits (248), Expect = 5e-19 Identities = 61/225 (27%), Positives = 111/225 (49%), Gaps = 13/225 (5%) Frame = -2 Query: 704 WKRVHKVAKCISTGLVWSIGKGKDVRAMHQPWLI--LNEKPVILKDLVPMNMELENLIVE 531 W+ + + + G++W IG G+ VR PWL L+ +P+ K+ + V Sbjct: 1305 WQAIEHGLELVKKGIIWRIGNGRSVRVWQDPWLPRDLSRRPITPKNNCRIKW------VA 1358 Query: 530 DLMLANESGWDSNRLDQLFPPA-ISLIVKQVVVRPQNGEGDRLRWVGTRNGSLSVKSAY* 354 DLML N WD+N+++Q+F P + +I+K + E D + W + G+ SV++AY Sbjct: 1359 DLMLDNGM-WDANKINQIFLPVDVEIILK--LRTSSRDEEDFIAWHPDKLGNFSVRTAYR 1415 Query: 353 MMNEEGWIGQPSSFNCKSI------KAIWRTNTSAANQFFLWKLYMTSLPTGDLIARRGM 192 + E W + +S + + + +W+ N + + F W+ LPT D +R + Sbjct: 1416 LA--ENWAKEEASSSSSDVNIRKAWELLWKCNVPSKVKIFTWRATSNCLPTWDNKKKRNL 1473 Query: 191 EGDFLCPFCWTEQEDPLHIFFKCDWIKNVWF----TSNLKIKIDD 69 E C C E+ED +H +C K++W +++L +++DD Sbjct: 1474 EISDTCVICGMEKEDTMHALCRCPQAKHLWLAMKESNDLSLRMDD 1518 >gb|EAZ40370.1| hypothetical protein OsJ_24816 [Oryza sativa Japonica Group] Length = 613 Score = 97.1 bits (240), Expect = 4e-18 Identities = 66/226 (29%), Positives = 102/226 (45%), Gaps = 13/226 (5%) Frame = -2 Query: 722 PHVSWFWKRVHKVAKCISTGLVWSIGKGKDVRAMHQPWLILN--EKPVILKDLVPMNMEL 549 P +S+ W+ + + + + GL+W +G G D+ + PW+ L ++P+ + + +N Sbjct: 146 PGISYSWRSIVRGVQVLKVGLIWRVGDGTDIDMWNDPWIPLGTTKRPITPRRGIVLNK-- 203 Query: 548 ENLIVEDLMLANESGWDSNRLDQLFPPAISLIVKQVVVRP-QNGEGDRLRWVGTRNGSLS 372 V DL+ WD + +F VK ++ P NG D W G S Sbjct: 204 ----VADLINPITGEWDRELIQDIFWEED---VKNILAIPVHNGYSDVAAWHFDPRGIFS 256 Query: 371 VKSAY*MMNEEG------WIGQPSSFNCKSI----KAIWRTNTSAANQFFLWKLYMTSLP 222 VKSAY + + G+ SS S + +WR N + FLW+L SLP Sbjct: 257 VKSAYHTLEYQRDRQAIRQTGESSSGKTSSAALQWEKLWRLNHLPKVKHFLWRLAHNSLP 316 Query: 221 TGDLIARRGMEGDFLCPFCWTEQEDPLHIFFKCDWIKNVWFTSNLK 84 I++RGME D CP C E+ H FFKC ++K W N + Sbjct: 317 LRQNISKRGMEIDTRCPVCLRLDENGGHCFFKCKFVKPCWRMLNFE 362 >gb|AEJ07916.1| putative ZmL1 non-LTR retrotransposon protein [Zea mays] Length = 472 Score = 95.9 bits (237), Expect = 9e-18 Identities = 65/212 (30%), Positives = 93/212 (43%), Gaps = 7/212 (3%) Frame = -2 Query: 716 VSWFWKRVHKVAKCISTGLVWSIGKGKDVRAMHQPWLILNEKPVILKDLVPMNMELENLI 537 +S+ W+ V K + GL+W IG G V PW+ E ++ P N L + + Sbjct: 11 ISYTWRNVLKGLHLLKEGLIWRIGDGNQVNIWVDPWIPRGETRRVI---TPRNGSLLHKV 67 Query: 536 VEDLMLANESGWDSNRLDQLFPPAISLIVKQVVVRPQNGEGDRLRWVGTRNGSLSVKSAY 357 E L+ WD + F + + + + Q G D L W G G+ SVKSAY Sbjct: 68 AE-LIDPITGSWDCRLVRDTFLQEDADCILAIPI--QEGMEDTLAWHGDPKGNFSVKSAY 124 Query: 356 *MM-------NEEGWIGQPSSFNCKSIKAIWRTNTSAANQFFLWKLYMTSLPTGDLIARR 198 + N S K+IW N + + FLW+L S P IARR Sbjct: 125 ALASRRRDHHNNADASSSISGRGENVWKSIWNVNVTNKIKMFLWRLAHNSHPVRVNIARR 184 Query: 197 GMEGDFLCPFCWTEQEDPLHIFFKCDWIKNVW 102 G++ + LCP C+ ED H+F KC +K VW Sbjct: 185 GIKIETLCPMCFRLDEDGGHLFLKCKKVKQVW 216 >ref|XP_002444973.1| hypothetical protein SORBIDRAFT_07g002160 [Sorghum bicolor] gi|241941323|gb|EES14468.1| hypothetical protein SORBIDRAFT_07g002160 [Sorghum bicolor] Length = 469 Score = 94.7 bits (234), Expect = 2e-17 Identities = 68/252 (26%), Positives = 109/252 (43%), Gaps = 12/252 (4%) Frame = -2 Query: 722 PHVSWFWKRVHKVAKCISTGLVWSIGKGKDVRAMHQPWLILNEKPVILKDLVPMNMELEN 543 P +S+ W+ + + + + GL+W +G G + PW+ + V + P + N Sbjct: 67 PGISYAWRSIVRGVQALKDGLIWRVGDGTQINIWTDPWI---PQGVTRRPCTPRGQTILN 123 Query: 542 LIVEDLMLANESGWDSNRLDQLFPPAISLIVKQVVVRPQNGE-GDRLRWVGTRNGSLSVK 366 + E L+ WD N + +F A VK ++ P E D L W G SVK Sbjct: 124 KVSE-LIDPISGEWDRNLVTDIFWEAD---VKNILSIPLKNEMEDTLAWHYDPKGDFSVK 179 Query: 365 SAY*MMNE------EGWIGQPSSFNCKSIK----AIWRTNTSAANQFFLWKLYMTSLPTG 216 SAY ++ + IG+ S+ IW+ + + F W+ SLP Sbjct: 180 SAYHVLTDMKELSKRRQIGEASASLISPCNNNWHKIWKLHCPPKVKLFFWRFTHNSLPLR 239 Query: 215 DLIARRGMEGDFLCPFCWTEQEDPLHIFFKCDWIKNVWFTSNL-KIKIDDEPNNTVRDWL 39 I RRGM+ D CP CW ED H F +C ++K W NL ++++ N+ + Sbjct: 240 MNILRRGMDIDTRCPVCWRLNEDGGHCFLRCKFVKKCWRALNLEELRLTLIDLNSAKQVA 299 Query: 38 DTLLSWSRNKDL 3 +LS +K L Sbjct: 300 TKILSLEEDKTL 311